RNA–Protein interactions for RNA: ENST00000261900.7

CCNT1-201, Transcript of cyclin T1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCNT1, Length 6,973 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-201ENST00000261900 MBD4O95243 580 aa9.47□□□□□ -0.89
CCNT1-201ENST00000261900 FMNL1O95466 1100 aaPredicted RBP9.47□□□□□ -0.89
CCNT1-201ENST00000261900 EPB41P11171 864 aaKnown RBP9.47□□□□□ -0.89
CCNT1-201ENST00000261900 ATF7P17544 494 aaPredicted RBP9.47□□□□□ -0.89
CCNT1-201ENST00000261900 JAKMIP2Q96AA8 810 aa9.47□□□□□ -0.89
CCNT1-201ENST00000261900 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.47□□□□□ -0.89
CCNT1-201ENST00000261900 AGTPBP1Q9UPW5 1226 aa9.47□□□□□ -0.89
CCNT1-201ENST00000261900 V9GYY5 206 aaPredicted RBP9.47□□□□□ -0.89
CCNT1-201ENST00000261900 PPFIA3O75145 1194 aa9.46□□□□□ -0.89
CCNT1-201ENST00000261900 ITGA6P23229 1130 aa9.46□□□□□ -0.89
CCNT1-201ENST00000261900 GSDMDP57764 484 aa9.46□□□□□ -0.89
CCNT1-201ENST00000261900 OTUD6AQ7L8S5 288 aa9.46□□□□□ -0.89
CCNT1-201ENST00000261900 KIF18AQ8NI77 898 aa9.46□□□□□ -0.89
CCNT1-201ENST00000261900 LMCD1Q9NZU5 365 aa9.46□□□□□ -0.89
CCNT1-201ENST00000261900 ZNF449Q6P9G9 518 aa9.46□□□□□ -0.89
CCNT1-201ENST00000261900 MTIF3Q9H2K0 278 aaKnown RBP9.46□□□□□ -0.89
CCNT1-201ENST00000261900 USP40Q9NVE5 1235 aa9.46□□□□□ -0.89
CCNT1-201ENST00000261900 NUB1Q9Y5A7 615 aa9.46□□□□□ -0.89
CCNT1-201ENST00000261900 CCDC171Q6TFL3 1326 aa9.46□□□□□ -0.9
CCNT1-201ENST00000261900 HOXD10P28358 340 aa9.46□□□□□ -0.9
CCNT1-201ENST00000261900 RARSP54136 660 aaKnown RBP9.46□□□□□ -0.9
CCNT1-201ENST00000261900 RPS8P62241 208 aaKnown RBP9.46□□□□□ -0.9
CCNT1-201ENST00000261900 YWHAEP62258 255 aaKnown RBP9.46□□□□□ -0.9
CCNT1-201ENST00000261900 LETM2Q2VYF4 491 aa9.46□□□□□ -0.9
CCNT1-201ENST00000261900 LIN9Q5TKA1 542 aa9.46□□□□□ -0.9
CCNT1-201ENST00000261900 NEK11Q8NG66 645 aa9.46□□□□□ -0.9
CCNT1-201ENST00000261900 PDE4DQ08499 809 aa9.46□□□□□ -0.9
CCNT1-201ENST00000261900 CCDC24Q8N4L8 307 aa9.46□□□□□ -0.9
CCNT1-201ENST00000261900 SMC6Q96SB8 1091 aa9.46□□□□□ -0.9
CCNT1-201ENST00000261900 USP25Q9UHP3 1055 aa9.46□□□□□ -0.9
CCNT1-201ENST00000261900 DISP3Q9P2K9 1392 aa9.45□□□□□ -0.9
CCNT1-201ENST00000261900 HMGB1P1B2RPK0 211 aaPredicted RBP9.45□□□□□ -0.9
CCNT1-201ENST00000261900 TRIM37O94972 964 aa9.45□□□□□ -0.9
CCNT1-201ENST00000261900 ATP2B4P23634 1241 aa9.45□□□□□ -0.9
CCNT1-201ENST00000261900 GJB2P29033 226 aa9.45□□□□□ -0.9
CCNT1-201ENST00000261900 ALDH3A1P30838 453 aa9.45□□□□□ -0.9
CCNT1-201ENST00000261900 TRPM2O94759 1503 aa9.45□□□□□ -0.9
CCNT1-201ENST00000261900 RNMTO43148 476 aaKnown RBP9.45□□□□□ -0.9
CCNT1-201ENST00000261900 DALRD3Q5D0E6 543 aaKnown RBP9.45□□□□□ -0.9
CCNT1-201ENST00000261900 DEPTORQ8TB45 409 aa9.45□□□□□ -0.9
CCNT1-201ENST00000261900 PPP1R9BQ96SB3 815 aa9.45□□□□□ -0.9
CCNT1-201ENST00000261900 DDX39AO00148 427 aaKnown RBP9.45□□□□□ -0.9
CCNT1-201ENST00000261900 DYNC1I1O14576 645 aa9.45□□□□□ -0.9
CCNT1-201ENST00000261900 CAVIN2O95810 425 aa9.45□□□□□ -0.9
CCNT1-201ENST00000261900 CFAP157Q5JU67 520 aa9.45□□□□□ -0.9
CCNT1-201ENST00000261900 MFSD14BQ5SR56 506 aa9.45□□□□□ -0.9
CCNT1-201ENST00000261900 SV2BQ7L1I2 683 aa9.45□□□□□ -0.9
CCNT1-201ENST00000261900 RETREG2Q8NC44 543 aa9.45□□□□□ -0.9
CCNT1-201ENST00000261900 SLC10A4Q96EP9 437 aa9.45□□□□□ -0.9
CCNT1-201ENST00000261900 DDX21Q9NR30 783 aaKnown RBP eCLIP9.45□□□□□ -0.9
CCNT1-201ENST00000261900 TSHZ2Q9NRE2 1034 aa9.45□□□□□ -0.9
CCNT1-201ENST00000261900 MTUS1Q9ULD2 1270 aa9.45□□□□□ -0.9
CCNT1-201ENST00000261900 POTEB2H3BUK9 544 aa9.45□□□□□ -0.9
CCNT1-201ENST00000261900 MCM7P33993 719 aa9.45□□□□□ -0.9
CCNT1-201ENST00000261900 KIF11P52732 1056 aa9.45□□□□□ -0.9
CCNT1-201ENST00000261900 DCAF17Q5H9S7 520 aaPredicted RBP9.45□□□□□ -0.9
CCNT1-201ENST00000261900 CCDC129Q6ZRS4 1044 aa9.45□□□□□ -0.9
CCNT1-201ENST00000261900 XPOTO43592 962 aaKnown RBP9.45□□□□□ -0.9
CCNT1-201ENST00000261900 IREB2P48200 963 aaKnown RBP9.45□□□□□ -0.9
CCNT1-201ENST00000261900 TPD52P55327 224 aaPredicted RBP9.45□□□□□ -0.9
CCNT1-201ENST00000261900 RNASELQ05823 741 aaKnown RBP9.45□□□□□ -0.9
CCNT1-201ENST00000261900 PLBD2Q8NHP8 589 aa9.45□□□□□ -0.9
CCNT1-201ENST00000261900 PPP2R3CQ969Q6 453 aa9.45□□□□□ -0.9
CCNT1-201ENST00000261900 ASXL2Q76L83 1435 aa9.45□□□□□ -0.9
CCNT1-201ENST00000261900 YEATS2Q9ULM3 1422 aa9.45□□□□□ -0.9
CCNT1-201ENST00000261900 NEMFO60524 1076 aa9.45□□□□□ -0.9
CCNT1-201ENST00000261900 KRT9P35527 623 aa9.45□□□□□ -0.9
CCNT1-201ENST00000261900 ARHGEF16Q5VV41 709 aa9.45□□□□□ -0.9
CCNT1-201ENST00000261900 LEO1Q8WVC0 666 aaPredicted RBP9.45□□□□□ -0.9
CCNT1-201ENST00000261900 GCNAQ96QF7 691 aa9.45□□□□□ -0.9
CCNT1-201ENST00000261900 ALAS1P13196 640 aa9.44□□□□□ -0.9
CCNT1-201ENST00000261900 PPP1R2P41236 205 aa9.44□□□□□ -0.9
CCNT1-201ENST00000261900 HS1BP3Q53T59 392 aa9.44□□□□□ -0.9
CCNT1-201ENST00000261900 MED10Q9BTT4 135 aa9.44□□□□□ -0.9
CCNT1-201ENST00000261900 ZMYM3Q14202 1370 aa9.44□□□□□ -0.9
CCNT1-201ENST00000261900 ELF1P32519 619 aa9.44□□□□□ -0.9
CCNT1-201ENST00000261900 MICALCLQ6ZW33 695 aa9.44□□□□□ -0.9
CCNT1-201ENST00000261900 YTHDC2Q9H6S0 1430 aaKnown RBP9.44□□□□□ -0.9
CCNT1-201ENST00000261900 ARHGEF37A1IGU5 675 aa9.44□□□□□ -0.9
CCNT1-201ENST00000261900 TACC1O75410 805 aa9.44□□□□□ -0.9
CCNT1-201ENST00000261900 STMN4Q9H169 189 aaPredicted RBP9.44□□□□□ -0.9
CCNT1-201ENST00000261900 IL16Q14005 1332 aa9.44□□□□□ -0.9
CCNT1-201ENST00000261900 DHX58Q96C10 678 aa9.44□□□□□ -0.9
CCNT1-201ENST00000261900 TCP10L2B9ZVM9 353 aa9.44□□□□□ -0.9
CCNT1-201ENST00000261900 KIAA0825Q8IV33 1275 aa9.44□□□□□ -0.9
CCNT1-201ENST00000261900 IQUBQ8NA54 791 aa9.44□□□□□ -0.9
CCNT1-201ENST00000261900 IPO4Q8TEX9 1081 aaKnown RBP9.44□□□□□ -0.9
CCNT1-201ENST00000261900 PAIP2Q9BPZ3 127 aaKnown RBP9.44□□□□□ -0.9
CCNT1-201ENST00000261900 TESPA1A2RU30 521 aaPredicted RBP9.43□□□□□ -0.9
CCNT1-201ENST00000261900 USH1GQ495M9 461 aa9.43□□□□□ -0.9
CCNT1-201ENST00000261900 TMC6Q7Z403 805 aa9.43□□□□□ -0.9
CCNT1-201ENST00000261900 DNAJC10Q8IXB1 793 aa9.43□□□□□ -0.9
CCNT1-201ENST00000261900 EXOC8Q8IYI6 725 aa9.43□□□□□ -0.9
CCNT1-201ENST00000261900 ORAI2Q96SN7 254 aa9.43□□□□□ -0.9
CCNT1-201ENST00000261900 LRRC2Q9BYS8 371 aa9.43□□□□□ -0.9
CCNT1-201ENST00000261900 EYA2O00167 538 aa9.43□□□□□ -0.9
CCNT1-201ENST00000261900 ERCC5P28715 1186 aaPredicted RBP9.43□□□□□ -0.9
CCNT1-201ENST00000261900 PLCD1P51178 756 aa9.43□□□□□ -0.9
CCNT1-201ENST00000261900 RAPGEF1Q13905 1077 aa9.43□□□□□ -0.9
CCNT1-201ENST00000261900 EIF4A2Q14240 407 aaKnown RBP9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms