RNA–Protein interactions for RNA: ENST00000261007.9

CHRNA1-201, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNA1, Length 1,980 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-201ENST00000261007 MYH15Q9Y2K3 1946 aa12.51□□□□□ -0.41
CHRNA1-201ENST00000261007 E7EWF7 191 aa12.5□□□□□ -0.41
CHRNA1-201ENST00000261007 M0R2C6 588 aa12.5□□□□□ -0.41
CHRNA1-201ENST00000261007 NRDCO43847 1150 aa12.5□□□□□ -0.41
CHRNA1-201ENST00000261007 CAMTA2O94983 1202 aa12.5□□□□□ -0.41
CHRNA1-201ENST00000261007 TEX35Q5T0J7 233 aa12.5□□□□□ -0.41
CHRNA1-201ENST00000261007 CLEC4GQ6UXB4 293 aa12.5□□□□□ -0.41
CHRNA1-201ENST00000261007 BPIFA3Q9BQP9 254 aa12.5□□□□□ -0.41
CHRNA1-201ENST00000261007 TRMT1Q9NXH9 659 aaKnown RBP12.5□□□□□ -0.41
CHRNA1-201ENST00000261007 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.5□□□□□ -0.41
CHRNA1-201ENST00000261007 AKAP11Q9UKA4 1901 aa12.5□□□□□ -0.41
CHRNA1-201ENST00000261007 DTNBO60941 627 aa12.5□□□□□ -0.41
CHRNA1-201ENST00000261007 TPM1P09493 284 aa12.5□□□□□ -0.41
CHRNA1-201ENST00000261007 TPM4P67936 248 aa12.5□□□□□ -0.41
CHRNA1-201ENST00000261007 PDE4CQ08493 712 aa12.5□□□□□ -0.41
CHRNA1-201ENST00000261007 NAA16Q6N069 864 aaPredicted RBP12.5□□□□□ -0.41
CHRNA1-201ENST00000261007 CCDC73Q6ZRK6 1079 aa12.5□□□□□ -0.41
CHRNA1-201ENST00000261007 STOX1Q6ZVD7 989 aa12.5□□□□□ -0.41
CHRNA1-201ENST00000261007 CCAR1Q8IX12 1150 aaKnown RBP12.5□□□□□ -0.41
CHRNA1-201ENST00000261007 SMARCC2Q8TAQ2 1214 aa12.5□□□□□ -0.41
CHRNA1-201ENST00000261007 BRF1Q92994 677 aa12.5□□□□□ -0.41
CHRNA1-201ENST00000261007 TCEANC2Q96MN5 208 aa12.5□□□□□ -0.41
CHRNA1-201ENST00000261007 MPHOSPH8Q99549 860 aa12.5□□□□□ -0.41
CHRNA1-201ENST00000261007 SRRTQ9BXP5 876 aaKnown RBP12.5□□□□□ -0.41
CHRNA1-201ENST00000261007 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.5□□□□□ -0.41
CHRNA1-201ENST00000261007 BCORQ6W2J9 1755 aa12.5□□□□□ -0.41
CHRNA1-201ENST00000261007 COL5A3P25940 1745 aaPredicted RBP12.5□□□□□ -0.41
CHRNA1-201ENST00000261007 H3BQV1 296 aa12.49□□□□□ -0.41
CHRNA1-201ENST00000261007 ZRANB2O95218 330 aaKnown RBP eCLIP12.49□□□□□ -0.41
CHRNA1-201ENST00000261007 PNMA6AP0CW24 399 aaPredicted RBP12.49□□□□□ -0.41
CHRNA1-201ENST00000261007 FGFR2P21802 821 aa12.49□□□□□ -0.41
CHRNA1-201ENST00000261007 ADD1P35611 737 aaKnown RBP12.49□□□□□ -0.41
CHRNA1-201ENST00000261007 ADD2P35612 726 aa12.49□□□□□ -0.41
CHRNA1-201ENST00000261007 CLCN6P51797 869 aa12.49□□□□□ -0.41
CHRNA1-201ENST00000261007 EVCP57679 992 aa12.49□□□□□ -0.41
CHRNA1-201ENST00000261007 IFFO2Q5TF58 517 aa12.49□□□□□ -0.41
CHRNA1-201ENST00000261007 SUSD4Q5VX71 490 aa12.49□□□□□ -0.41
CHRNA1-201ENST00000261007 E4F1Q66K89 784 aaPredicted RBP12.49□□□□□ -0.41
CHRNA1-201ENST00000261007 RGS22Q8NE09 1264 aa12.49□□□□□ -0.41
CHRNA1-201ENST00000261007 ENGASEQ8NFI3 743 aa12.49□□□□□ -0.41
CHRNA1-201ENST00000261007 PPP1R13BQ96KQ4 1090 aa12.49□□□□□ -0.41
CHRNA1-201ENST00000261007 NAP1L2Q9ULW6 460 aaPredicted RBP12.49□□□□□ -0.41
CHRNA1-201ENST00000261007 PHLPP2Q6ZVD8 1323 aa12.49□□□□□ -0.41
CHRNA1-201ENST00000261007 ERICH4A6NGS2 130 aa12.49□□□□□ -0.41
CHRNA1-201ENST00000261007 KINO60870 393 aaKnown RBP12.49□□□□□ -0.41
CHRNA1-201ENST00000261007 IGHMBP2P38935 993 aaKnown RBP12.49□□□□□ -0.41
CHRNA1-201ENST00000261007 MCAMP43121 646 aa12.49□□□□□ -0.41
CHRNA1-201ENST00000261007 FAM160A1Q05DH4 1040 aa12.49□□□□□ -0.41
CHRNA1-201ENST00000261007 ERCC6LQ2NKX8 1250 aa12.49□□□□□ -0.41
CHRNA1-201ENST00000261007 SYNE4Q8N205 404 aa12.49□□□□□ -0.41
CHRNA1-201ENST00000261007 ZNF396Q96N95 335 aaPredicted RBP12.49□□□□□ -0.41
CHRNA1-201ENST00000261007 ZMYM6O95789 1325 aa12.48□□□□□ -0.41
CHRNA1-201ENST00000261007 GPAA1O43292 621 aa12.48□□□□□ -0.41
CHRNA1-201ENST00000261007 DHX16O60231 1041 aaKnown RBP12.48□□□□□ -0.41
CHRNA1-201ENST00000261007 CHGBP05060 677 aa12.48□□□□□ -0.41
CHRNA1-201ENST00000261007 PLA2G4AP47712 749 aa12.48□□□□□ -0.41
CHRNA1-201ENST00000261007 STK3Q13188 491 aa12.48□□□□□ -0.41
CHRNA1-201ENST00000261007 SCARF1Q14162 830 aa12.48□□□□□ -0.41
CHRNA1-201ENST00000261007 MUM1L1Q5H9M0 696 aa12.48□□□□□ -0.41
CHRNA1-201ENST00000261007 CCDC102BQ68D86 513 aa12.48□□□□□ -0.41
CHRNA1-201ENST00000261007 NBPF11Q86T75 865 aa12.48□□□□□ -0.41
CHRNA1-201ENST00000261007 TXLNBQ8N3L3 684 aa12.48□□□□□ -0.41
CHRNA1-201ENST00000261007 NCOA7Q8NI08 942 aa12.48□□□□□ -0.41
CHRNA1-201ENST00000261007 ACSBG1Q96GR2 724 aa12.48□□□□□ -0.41
CHRNA1-201ENST00000261007 CDC5LQ99459 802 aaKnown RBP12.48□□□□□ -0.41
CHRNA1-201ENST00000261007 DDX60Q8IY21 1712 aaKnown RBP12.47□□□□□ -0.41
CHRNA1-201ENST00000261007 NUTM2BA6NNL0 878 aaPredicted RBP12.47□□□□□ -0.41
CHRNA1-201ENST00000261007 NUTM2EB1AL46 878 aaPredicted RBP12.47□□□□□ -0.41
CHRNA1-201ENST00000261007 ZNF213O14771 459 aa12.47□□□□□ -0.41
CHRNA1-201ENST00000261007 HNRNPH2P55795 449 aaKnown RBP12.47□□□□□ -0.41
CHRNA1-201ENST00000261007 SCRN1Q12765 414 aa12.47□□□□□ -0.41
CHRNA1-201ENST00000261007 VPS72Q15906 364 aa12.47□□□□□ -0.41
CHRNA1-201ENST00000261007 TMCO3Q6UWJ1 677 aa12.47□□□□□ -0.41
CHRNA1-201ENST00000261007 RALYLQ86SE5 291 aaKnown RBP12.47□□□□□ -0.41
CHRNA1-201ENST00000261007 NUTM2AQ8IVF1 878 aaPredicted RBP12.47□□□□□ -0.41
CHRNA1-201ENST00000261007 ST7Q9NRC1 585 aa12.47□□□□□ -0.41
CHRNA1-201ENST00000261007 CNTNAP4Q9C0A0 1308 aa12.47□□□□□ -0.41
CHRNA1-201ENST00000261007 A0A0G2JS52 829 aa12.47□□□□□ -0.41
CHRNA1-201ENST00000261007 NTSR2O95665 410 aa12.47□□□□□ -0.41
CHRNA1-201ENST00000261007 CAPN2P17655 700 aa12.47□□□□□ -0.41
CHRNA1-201ENST00000261007 TRDNQ13061 729 aa12.47□□□□□ -0.41
CHRNA1-201ENST00000261007 ITPK1Q13572 414 aa12.47□□□□□ -0.41
CHRNA1-201ENST00000261007 UBXN6Q9BZV1 441 aa12.47□□□□□ -0.41
CHRNA1-201ENST00000261007 NIP7Q9Y221 180 aaKnown RBP eCLIP12.47□□□□□ -0.41
CHRNA1-201ENST00000261007 JAK2O60674 1132 aa12.46□□□□□ -0.41
CHRNA1-201ENST00000261007 FGAP02671 866 aa12.46□□□□□ -0.41
CHRNA1-201ENST00000261007 ETF1P62495 437 aaKnown RBP12.46□□□□□ -0.41
CHRNA1-201ENST00000261007 MAP3K12Q12852 859 aa12.46□□□□□ -0.41
CHRNA1-201ENST00000261007 ALX1Q15699 326 aa12.46□□□□□ -0.41
CHRNA1-201ENST00000261007 ARHGAP29Q52LW3 1261 aa12.46□□□□□ -0.41
CHRNA1-201ENST00000261007 SLC9C2Q5TAH2 1124 aa12.46□□□□□ -0.41
CHRNA1-201ENST00000261007 SYT10Q6XYQ8 523 aa12.46□□□□□ -0.41
CHRNA1-201ENST00000261007 AOPEPQ8N6M6 819 aa12.46□□□□□ -0.41
CHRNA1-201ENST00000261007 NSUN7Q8NE18 718 aaKnown RBP12.46□□□□□ -0.41
CHRNA1-201ENST00000261007 UBXN4Q92575 508 aa12.46□□□□□ -0.41
CHRNA1-201ENST00000261007 GOLPH3LQ9H4A5 285 aa12.46□□□□□ -0.41
CHRNA1-201ENST00000261007 ORC3Q9UBD5 711 aaPredicted RBP12.46□□□□□ -0.41
CHRNA1-201ENST00000261007 SFPQP23246 707 aaKnown RBP eCLIP12.45□□□□□ -0.42
CHRNA1-201ENST00000261007 COL9A3Q14050 684 aaPredicted RBP12.45□□□□□ -0.42
CHRNA1-201ENST00000261007 PUS7LQ9H0K6 701 aaKnown RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms