RNA–Protein interactions for RNA: ENST00000258909.13

TM6SF1-201, Transcript of transmembrane 6 superfamily member 1, humanhuman

TSL 1 (best)

Gene TM6SF1, Length 1,469 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-201ENST00000258909 DIEXFQ68CQ4 756 aaKnown RBP23.58■■□□□ 1.37
TM6SF1-201ENST00000258909 MIGA2Q7L4E1 593 aa23.58■■□□□ 1.37
TM6SF1-201ENST00000258909 ZKSCAN4Q969J2 545 aaPredicted RBP23.58■■□□□ 1.37
TM6SF1-201ENST00000258909 MS4A4AQ96JQ5 239 aa23.58■■□□□ 1.37
TM6SF1-201ENST00000258909 WRNIP1Q96S55 665 aa23.58■■□□□ 1.37
TM6SF1-201ENST00000258909 TNRC18O15417 2968 aaPredicted RBP23.58■■□□□ 1.37
TM6SF1-201ENST00000258909 A0A1B0GUL7 405 aa23.57■■□□□ 1.36
TM6SF1-201ENST00000258909 TESPA1A2RU30 521 aaPredicted RBP23.57■■□□□ 1.36
TM6SF1-201ENST00000258909 GNAI2P04899 355 aa23.57■■□□□ 1.36
TM6SF1-201ENST00000258909 NFIAQ12857 509 aa23.57■■□□□ 1.36
TM6SF1-201ENST00000258909 OTUD7BQ6GQQ9 843 aa23.57■■□□□ 1.36
TM6SF1-201ENST00000258909 SALL1Q9NSC2 1324 aa23.56■■□□□ 1.36
TM6SF1-201ENST00000258909 SEMA3EO15041 775 aa23.56■■□□□ 1.36
TM6SF1-201ENST00000258909 RASGRF1Q13972 1273 aa23.56■■□□□ 1.36
TM6SF1-201ENST00000258909 TMEM57Q8N5G2 664 aa23.56■■□□□ 1.36
TM6SF1-201ENST00000258909 BRI3BPQ8WY22 251 aa23.56■■□□□ 1.36
TM6SF1-201ENST00000258909 XAGE2Q96GT9 111 aa23.56■■□□□ 1.36
TM6SF1-201ENST00000258909 SNCAIPQ9Y6H5 919 aa23.56■■□□□ 1.36
TM6SF1-201ENST00000258909 PNMA6EA0A0J9YXQ4 647 aa23.56■■□□□ 1.36
TM6SF1-201ENST00000258909 FAM151AQ8WW52 585 aa23.56■■□□□ 1.36
TM6SF1-201ENST00000258909 NEUROD6Q96NK8 337 aa23.56■■□□□ 1.36
TM6SF1-201ENST00000258909 USP40Q9NVE5 1235 aa23.56■■□□□ 1.36
TM6SF1-201ENST00000258909 MYH2Q9UKX2 1941 aa23.55■■□□□ 1.36
TM6SF1-201ENST00000258909 CCL15-CCL14A0A0B4J2E2 113 aa23.55■■□□□ 1.36
TM6SF1-201ENST00000258909 CCL15Q16663 113 aa23.55■■□□□ 1.36
TM6SF1-201ENST00000258909 ZKSCAN2Q63HK3 967 aa23.55■■□□□ 1.36
TM6SF1-201ENST00000258909 ABCF2Q9UG63 623 aa23.55■■□□□ 1.36
TM6SF1-201ENST00000258909 SPDYE5A6NIY4 337 aa23.54■■□□□ 1.36
TM6SF1-201ENST00000258909 GTF2A2P52657 109 aa23.54■■□□□ 1.36
TM6SF1-201ENST00000258909 FBXO46Q6PJ61 603 aaPredicted RBP23.54■■□□□ 1.36
TM6SF1-201ENST00000258909 HOOK2Q96ED9 719 aa23.54■■□□□ 1.36
TM6SF1-201ENST00000258909 AKAP2Q9Y2D5 859 aa23.54■■□□□ 1.36
TM6SF1-201ENST00000258909 TRIM17Q9Y577 477 aa23.54■■□□□ 1.36
TM6SF1-201ENST00000258909 RPAP1Q9BWH6 1393 aaPredicted RBP23.53■■□□□ 1.36
TM6SF1-201ENST00000258909 DCAF15Q66K64 600 aa23.53■■□□□ 1.36
TM6SF1-201ENST00000258909 ZFPM1Q8IX07 1006 aa23.53■■□□□ 1.36
TM6SF1-201ENST00000258909 ZNF341Q9BYN7 854 aa23.53■■□□□ 1.36
TM6SF1-201ENST00000258909 FAM198AQ9UFP1 575 aa23.53■■□□□ 1.36
TM6SF1-201ENST00000258909 HTTP42858 3142 aa23.53■■□□□ 1.36
TM6SF1-201ENST00000258909 INPP5BP32019 993 aa23.52■■□□□ 1.36
TM6SF1-201ENST00000258909 ERO1BQ86YB8 467 aa23.52■■□□□ 1.36
TM6SF1-201ENST00000258909 FAM43AQ8N2R8 423 aa23.52■■□□□ 1.36
TM6SF1-201ENST00000258909 CD99L2Q8TCZ2 262 aa23.52■■□□□ 1.36
TM6SF1-201ENST00000258909 MVPQ14764 893 aaKnown RBP23.51■■□□□ 1.35
TM6SF1-201ENST00000258909 OTOP1Q7RTM1 612 aa23.51■■□□□ 1.35
TM6SF1-201ENST00000258909 DZIP1Q86YF9 867 aaKnown RBP23.51■■□□□ 1.35
TM6SF1-201ENST00000258909 ZGPATQ8N5A5 531 aaKnown RBP23.51■■□□□ 1.35
TM6SF1-201ENST00000258909 IRF6O14896 467 aa23.5■■□□□ 1.35
TM6SF1-201ENST00000258909 G3BP1Q13283 466 aaKnown RBP eCLIP23.5■■□□□ 1.35
TM6SF1-201ENST00000258909 TAF1CQ15572 869 aaPredicted RBP23.5■■□□□ 1.35
TM6SF1-201ENST00000258909 CAP1Q01518 475 aa23.49■■□□□ 1.35
TM6SF1-201ENST00000258909 GORABQ5T7V8 394 aa23.49■■□□□ 1.35
TM6SF1-201ENST00000258909 PI16Q6UXB8 463 aa23.49■■□□□ 1.35
TM6SF1-201ENST00000258909 C1orf115Q9H7X2 142 aa23.49■■□□□ 1.35
TM6SF1-201ENST00000258909 CENPFP49454 3210 aa23.49■■□□□ 1.35
TM6SF1-201ENST00000258909 ZBTB22O15209 634 aa23.49■■□□□ 1.35
TM6SF1-201ENST00000258909 SP3Q02447 781 aa23.49■■□□□ 1.35
TM6SF1-201ENST00000258909 ERO1AQ96HE7 468 aa23.49■■□□□ 1.35
TM6SF1-201ENST00000258909 HMG20BQ9P0W2 317 aa23.49■■□□□ 1.35
TM6SF1-201ENST00000258909 GAKO14976 1311 aa23.48■■□□□ 1.35
TM6SF1-201ENST00000258909 RGS3P49796 1198 aa23.48■■□□□ 1.35
TM6SF1-201ENST00000258909 PDS5AQ29RF7 1337 aaKnown RBP23.47■■□□□ 1.35
TM6SF1-201ENST00000258909 PDE4DIPQ5VU43 2346 aa23.47■■□□□ 1.35
TM6SF1-201ENST00000258909 CETPP11597 493 aa23.47■■□□□ 1.35
TM6SF1-201ENST00000258909 MECOMQ03112 1051 aa23.47■■□□□ 1.35
TM6SF1-201ENST00000258909 PPIL2Q13356 520 aa23.47■■□□□ 1.35
TM6SF1-201ENST00000258909 SNAPC2Q13487 334 aa23.47■■□□□ 1.35
TM6SF1-201ENST00000258909 SPTY2D1Q68D10 685 aaPredicted RBP23.47■■□□□ 1.35
TM6SF1-201ENST00000258909 TBC1D9Q6ZT07 1266 aa23.47■■□□□ 1.35
TM6SF1-201ENST00000258909 FTSJ3Q8IY81 847 aaKnown RBP23.47■■□□□ 1.35
TM6SF1-201ENST00000258909 ZFYVE28Q9HCC9 887 aa23.47■■□□□ 1.35
TM6SF1-201ENST00000258909 RLBP1P12271 317 aa23.46■■□□□ 1.35
TM6SF1-201ENST00000258909 BTDP43251 543 aa23.46■■□□□ 1.35
TM6SF1-201ENST00000258909 ERICH6Q7L0X2 663 aa23.46■■□□□ 1.35
TM6SF1-201ENST00000258909 SPATA5Q8NB90 893 aa23.46■■□□□ 1.35
TM6SF1-201ENST00000258909 ZNF384Q8TF68 577 aa23.46■■□□□ 1.35
TM6SF1-201ENST00000258909 ZNF112Q9UJU3 913 aa23.46■■□□□ 1.35
TM6SF1-201ENST00000258909 BTBD19C9JJ37 291 aa23.45■■□□□ 1.34
TM6SF1-201ENST00000258909 SLURP2P0DP57 97 aa23.45■■□□□ 1.34
TM6SF1-201ENST00000258909 PPATQ06203 517 aa23.45■■□□□ 1.34
TM6SF1-201ENST00000258909 ITPRIPQ8IWB1 547 aa23.45■■□□□ 1.34
TM6SF1-201ENST00000258909 SLF2Q8IX21 1173 aa23.45■■□□□ 1.34
TM6SF1-201ENST00000258909 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.45■■□□□ 1.34
TM6SF1-201ENST00000258909 IDI2Q9BXS1 227 aa23.45■■□□□ 1.34
TM6SF1-201ENST00000258909 EFCC1Q9HA90 598 aa23.45■■□□□ 1.34
TM6SF1-201ENST00000258909 DOCK2Q92608 1830 aa23.44■■□□□ 1.34
TM6SF1-201ENST00000258909 PICALMQ13492 652 aa23.44■■□□□ 1.34
TM6SF1-201ENST00000258909 POLA2Q14181 598 aa23.44■■□□□ 1.34
TM6SF1-201ENST00000258909 SH3BP5LQ7L8J4 393 aa23.44■■□□□ 1.34
TM6SF1-201ENST00000258909 ZSCAN29Q8IWY8 852 aaPredicted RBP23.44■■□□□ 1.34
TM6SF1-201ENST00000258909 DDX4Q9NQI0 724 aaKnown RBP23.44■■□□□ 1.34
TM6SF1-201ENST00000258909 PTPN22Q9Y2R2 807 aa23.44■■□□□ 1.34
TM6SF1-201ENST00000258909 MROH7-TTC4A0A0A0MT08 1334 aa23.44■■□□□ 1.34
TM6SF1-201ENST00000258909 ENTPD3O75355 529 aa23.43■■□□□ 1.34
TM6SF1-201ENST00000258909 WDHD1O75717 1129 aaPredicted RBP23.43■■□□□ 1.34
TM6SF1-201ENST00000258909 ATP8B2P98198 1209 aa23.43■■□□□ 1.34
TM6SF1-201ENST00000258909 OS9Q13438 667 aaPredicted RBP23.43■■□□□ 1.34
TM6SF1-201ENST00000258909 FAM163AQ96GL9 167 aaPredicted RBP23.43■■□□□ 1.34
TM6SF1-201ENST00000258909 RFX7Q2KHR2 1363 aa23.43■■□□□ 1.34
TM6SF1-201ENST00000258909 DDTLA6NHG4 134 aaPredicted RBP23.43■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms