RNA–Protein interactions for RNA: ENST00000258613.4

THSD1-201, Transcript of thrombospondin type 1 domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THSD1, Length 2,962 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THSD1-201ENST00000258613 ZNF384Q8TF68 577 aa15.35■□□□□ 0.05
THSD1-201ENST00000258613 GPR101Q96P66 508 aaPredicted RBP15.35■□□□□ 0.05
THSD1-201ENST00000258613 PRDM1O75626 825 aa15.34■□□□□ 0.05
THSD1-201ENST00000258613 ME1P48163 572 aa15.34■□□□□ 0.05
THSD1-201ENST00000258613 MAP3K11Q16584 847 aa15.34■□□□□ 0.05
THSD1-201ENST00000258613 C17orf53Q8N3J3 647 aaPredicted RBP15.34■□□□□ 0.05
THSD1-201ENST00000258613 IGDCC4Q8TDY8 1250 aa15.34■□□□□ 0.05
THSD1-201ENST00000258613 ARHGEF1Q92888 912 aaKnown RBP15.34■□□□□ 0.05
THSD1-201ENST00000258613 AK7Q96M32 723 aa15.34■□□□□ 0.05
THSD1-201ENST00000258613 CDC5LQ99459 802 aaKnown RBP15.34■□□□□ 0.05
THSD1-201ENST00000258613 MRVI1Q9Y6F6 885 aa15.34■□□□□ 0.05
THSD1-201ENST00000258613 COL1A1P02452 1464 aaPredicted RBP15.34■□□□□ 0.05
THSD1-201ENST00000258613 SH2B2O14492 632 aaPredicted RBP15.34■□□□□ 0.05
THSD1-201ENST00000258613 EVCP57679 992 aa15.34■□□□□ 0.05
THSD1-201ENST00000258613 CHAF1AQ13111 956 aaPredicted RBP15.34■□□□□ 0.05
THSD1-201ENST00000258613 TMEM67Q5HYA8 995 aa15.34■□□□□ 0.05
THSD1-201ENST00000258613 NAA16Q6N069 864 aaPredicted RBP15.34■□□□□ 0.05
THSD1-201ENST00000258613 APOA5Q6Q788 366 aa15.34■□□□□ 0.05
THSD1-201ENST00000258613 CCAR1Q8IX12 1150 aaKnown RBP15.34■□□□□ 0.05
THSD1-201ENST00000258613 FAM84BQ96KN1 310 aaPredicted RBP15.34■□□□□ 0.05
THSD1-201ENST00000258613 SETDB2Q96T68 719 aa15.34■□□□□ 0.05
THSD1-201ENST00000258613 ZSCAN16Q9H4T2 348 aaPredicted RBP15.34■□□□□ 0.05
THSD1-201ENST00000258613 METAP2P50579 478 aaKnown RBP eCLIP15.33■□□□□ 0.05
THSD1-201ENST00000258613 TYRO3Q06418 890 aa15.33■□□□□ 0.05
THSD1-201ENST00000258613 SPC24Q8NBT2 197 aa15.33■□□□□ 0.05
THSD1-201ENST00000258613 IFIT3O14879 490 aaKnown RBP15.33■□□□□ 0.04
THSD1-201ENST00000258613 ZPR1O75312 459 aa15.33■□□□□ 0.04
THSD1-201ENST00000258613 MSNP26038 577 aaKnown RBP15.33■□□□□ 0.04
THSD1-201ENST00000258613 ANO6Q4KMQ2 910 aa15.33■□□□□ 0.04
THSD1-201ENST00000258613 TTC12Q9H892 705 aaPredicted RBP15.33■□□□□ 0.04
THSD1-201ENST00000258613 A0A1B0GVL5 298 aa15.33■□□□□ 0.04
THSD1-201ENST00000258613 LY9Q9HBG7 655 aa15.33■□□□□ 0.04
THSD1-201ENST00000258613 RANBP6O60518 1105 aaKnown RBP15.32■□□□□ 0.04
THSD1-201ENST00000258613 GUCY1A2P33402 732 aa15.32■□□□□ 0.04
THSD1-201ENST00000258613 CLEC4GQ6UXB4 293 aa15.32■□□□□ 0.04
THSD1-201ENST00000258613 FBXO18Q8NFZ0 1043 aa15.32■□□□□ 0.04
THSD1-201ENST00000258613 DNAJC25Q9H1X3 360 aa15.32■□□□□ 0.04
THSD1-201ENST00000258613 FAM217BQ9NTX9 383 aaPredicted RBP15.32■□□□□ 0.04
THSD1-201ENST00000258613 CFAP45Q9UL16 551 aa15.32■□□□□ 0.04
THSD1-201ENST00000258613 hCG_1642624A0A1W2PR95 340 aa15.32■□□□□ 0.04
THSD1-201ENST00000258613 CCDC192P0DO97 292 aa15.32■□□□□ 0.04
THSD1-201ENST00000258613 BAZ2AQ9UIF9 1905 aaKnown RBP15.32■□□□□ 0.04
THSD1-201ENST00000258613 LRP5O75197 1615 aa15.32■□□□□ 0.04
THSD1-201ENST00000258613 MARCKSP29966 332 aaPredicted RBP15.31■□□□□ 0.04
THSD1-201ENST00000258613 RPS8P62241 208 aaKnown RBP15.31■□□□□ 0.04
THSD1-201ENST00000258613 RCOR1Q9UKL0 485 aa15.31■□□□□ 0.04
THSD1-201ENST00000258613 PCDHA7Q9UN72 937 aa15.31■□□□□ 0.04
THSD1-201ENST00000258613 SF3B3Q15393 1217 aaKnown RBP15.31■□□□□ 0.04
THSD1-201ENST00000258613 MFSD6Q6ZSS7 791 aa15.31■□□□□ 0.04
THSD1-201ENST00000258613 TICAM2Q86XR7 235 aa15.31■□□□□ 0.04
THSD1-201ENST00000258613 ALG1Q9BT22 464 aa15.31■□□□□ 0.04
THSD1-201ENST00000258613 BSDC1Q9NW68 430 aaPredicted RBP15.31■□□□□ 0.04
THSD1-201ENST00000258613 NARFQ9UHQ1 456 aa15.31■□□□□ 0.04
THSD1-201ENST00000258613 RPS6KA4O75676 772 aa15.3■□□□□ 0.04
THSD1-201ENST00000258613 LETM1O95202 739 aaPredicted RBP15.3■□□□□ 0.04
THSD1-201ENST00000258613 AKNAD1Q5T1N1 836 aa15.3■□□□□ 0.04
THSD1-201ENST00000258613 NUP133Q8WUM0 1156 aa15.3■□□□□ 0.04
THSD1-201ENST00000258613 CLSTN2Q9H4D0 955 aa15.3■□□□□ 0.04
THSD1-201ENST00000258613 LRRC4BQ9NT99 713 aa15.3■□□□□ 0.04
THSD1-201ENST00000258613 ATRNO75882 1429 aa15.3■□□□□ 0.04
THSD1-201ENST00000258613 ZBTB43O43298 467 aa15.3■□□□□ 0.04
THSD1-201ENST00000258613 PRDX5P30044 214 aa15.3■□□□□ 0.04
THSD1-201ENST00000258613 FAM196AQ6ZSG2 479 aa15.3■□□□□ 0.04
THSD1-201ENST00000258613 FSIP1Q8NA03 581 aa15.3■□□□□ 0.04
THSD1-201ENST00000258613 NLRP3Q96P20 1036 aa15.3■□□□□ 0.04
THSD1-201ENST00000258613 PRDM4Q9UKN5 801 aa15.3■□□□□ 0.04
THSD1-201ENST00000258613 NOL7Q9UMY1 257 aaKnown RBP15.3■□□□□ 0.04
THSD1-201ENST00000258613 RTCBQ9Y3I0 505 aaKnown RBP15.3■□□□□ 0.04
THSD1-201ENST00000258613 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.3■□□□□ 0.04
THSD1-201ENST00000258613 MYH2Q9UKX2 1941 aa15.3■□□□□ 0.04
THSD1-201ENST00000258613 COL5A3P25940 1745 aaPredicted RBP15.3■□□□□ 0.04
THSD1-201ENST00000258613 UTRNP46939 3433 aa15.3■□□□□ 0.04
THSD1-201ENST00000258613 GOLGA8AA7E2F4 631 aa15.3■□□□□ 0.04
THSD1-201ENST00000258613 SNW1Q13573 536 aaKnown RBP15.3■□□□□ 0.04
THSD1-201ENST00000258613 MEX3CQ5U5Q3 659 aaKnown RBP15.3■□□□□ 0.04
THSD1-201ENST00000258613 FNBP4Q8N3X1 1017 aaPredicted RBP15.3■□□□□ 0.04
THSD1-201ENST00000258613 FBXL16Q8N461 479 aa15.3■□□□□ 0.04
THSD1-201ENST00000258613 SLC26A6Q9BXS9 759 aa15.3■□□□□ 0.04
THSD1-201ENST00000258613 CBX8Q9HC52 389 aa15.29■□□□□ 0.04
THSD1-201ENST00000258613 AATFQ9NY61 560 aaKnown RBP eCLIP15.29■□□□□ 0.04
THSD1-201ENST00000258613 KCNJ14Q9UNX9 436 aa15.29■□□□□ 0.04
THSD1-201ENST00000258613 KIF3AQ9Y496 699 aa15.29■□□□□ 0.04
THSD1-201ENST00000258613 SLC12A7Q9Y666 1083 aa15.29■□□□□ 0.04
THSD1-201ENST00000258613 ZMYM6O95789 1325 aa15.28■□□□□ 0.04
THSD1-201ENST00000258613 MAGEB6P1A0A0J9YX57 407 aa15.28■□□□□ 0.04
THSD1-201ENST00000258613 NFIXQ14938 502 aa15.28■□□□□ 0.04
THSD1-201ENST00000258613 NTRK3Q16288 839 aa15.28■□□□□ 0.04
THSD1-201ENST00000258613 CAVIN4Q5BKX8 364 aa15.28■□□□□ 0.04
THSD1-201ENST00000258613 KRT40Q6A162 431 aa15.28■□□□□ 0.04
THSD1-201ENST00000258613 DHX16O60231 1041 aaKnown RBP15.28■□□□□ 0.04
THSD1-201ENST00000258613 KIF23Q02241 960 aaPredicted RBP15.28■□□□□ 0.04
THSD1-201ENST00000258613 PPARAQ07869 468 aa15.28■□□□□ 0.04
THSD1-201ENST00000258613 STK38Q15208 465 aa15.28■□□□□ 0.04
THSD1-201ENST00000258613 MYSM1Q5VVJ2 828 aa15.28■□□□□ 0.04
THSD1-201ENST00000258613 C11orf57Q6ZUT1 292 aaPredicted RBP15.28■□□□□ 0.04
THSD1-201ENST00000258613 ZKSCAN5Q9Y2L8 839 aa15.28■□□□□ 0.04
THSD1-201ENST00000258613 BTAF1O14981 1849 aa15.28■□□□□ 0.04
THSD1-201ENST00000258613 CNTNAP4Q9C0A0 1308 aa15.28■□□□□ 0.04
THSD1-201ENST00000258613 CCDC69A6NI79 296 aa15.27■□□□□ 0.04
THSD1-201ENST00000258613 NMT2O60551 498 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms