RNA–Protein interactions for RNA: ENST00000257604.9

TRAFD1-201, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene TRAFD1, Length 3,178 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-201ENST00000257604 MARCKSP29966 332 aaPredicted RBP17.08■□□□□ 0.32
TRAFD1-201ENST00000257604 TRAPPC3LQ5T215 181 aa17.08■□□□□ 0.32
TRAFD1-201ENST00000257604 MAP7D2Q96T17 732 aa17.08■□□□□ 0.32
TRAFD1-201ENST00000257604 GNL3LQ9NVN8 582 aaKnown RBP17.08■□□□□ 0.32
TRAFD1-201ENST00000257604 ABCC12Q96J65 1359 aa17.07■□□□□ 0.32
TRAFD1-201ENST00000257604 TJP1Q07157 1748 aa17.07■□□□□ 0.32
TRAFD1-201ENST00000257604 CCDC69A6NI79 296 aa17.07■□□□□ 0.32
TRAFD1-201ENST00000257604 NOLC1Q14978 699 aaKnown RBP eCLIP17.07■□□□□ 0.32
TRAFD1-201ENST00000257604 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.07■□□□□ 0.32
TRAFD1-201ENST00000257604 SLC26A6Q9BXS9 759 aa17.07■□□□□ 0.32
TRAFD1-201ENST00000257604 UBR2Q8IWV8 1755 aa17.07■□□□□ 0.32
TRAFD1-201ENST00000257604 PLEKHG2Q9H7P9 1386 aa17.07■□□□□ 0.32
TRAFD1-201ENST00000257604 MB21D2Q8IYB1 491 aaPredicted RBP17.07■□□□□ 0.32
TRAFD1-201ENST00000257604 DOT1LQ8TEK3 1739 aa17.07■□□□□ 0.32
TRAFD1-201ENST00000257604 PGBD1Q96JS3 809 aa17.07■□□□□ 0.32
TRAFD1-201ENST00000257604 NACAP1Q9BZK3 213 aa17.07■□□□□ 0.32
TRAFD1-201ENST00000257604 SCAND2PQ9GZW5 306 aaPredicted RBP17.07■□□□□ 0.32
TRAFD1-201ENST00000257604 PRDM4Q9UKN5 801 aa17.07■□□□□ 0.32
TRAFD1-201ENST00000257604 KIF3AQ9Y496 699 aa17.07■□□□□ 0.32
TRAFD1-201ENST00000257604 COL16A1Q07092 1604 aaPredicted RBP17.06■□□□□ 0.32
TRAFD1-201ENST00000257604 MYH14Q7Z406 1995 aaKnown RBP17.06■□□□□ 0.32
TRAFD1-201ENST00000257604 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.06■□□□□ 0.32
TRAFD1-201ENST00000257604 GOLGA8AA7E2F4 631 aa17.06■□□□□ 0.32
TRAFD1-201ENST00000257604 FDPSP14324 419 aaKnown RBP17.06■□□□□ 0.32
TRAFD1-201ENST00000257604 ARID4AP29374 1257 aaPredicted RBP17.06■□□□□ 0.32
TRAFD1-201ENST00000257604 UBE3CQ15386 1083 aa17.06■□□□□ 0.32
TRAFD1-201ENST00000257604 ZNF219Q9P2Y4 722 aaPredicted RBP17.06■□□□□ 0.32
TRAFD1-201ENST00000257604 PRDX5P30044 214 aa17.06■□□□□ 0.32
TRAFD1-201ENST00000257604 NAA16Q6N069 864 aaPredicted RBP17.06■□□□□ 0.32
TRAFD1-201ENST00000257604 ANGEL1Q9UNK9 670 aaKnown RBP17.06■□□□□ 0.32
TRAFD1-201ENST00000257604 SLC12A7Q9Y666 1083 aa17.06■□□□□ 0.32
TRAFD1-201ENST00000257604 BAZ2BQ9UIF8 2168 aaKnown RBP17.06■□□□□ 0.32
TRAFD1-201ENST00000257604 RESTQ13127 1097 aa17.05■□□□□ 0.32
TRAFD1-201ENST00000257604 STK38Q15208 465 aa17.05■□□□□ 0.32
TRAFD1-201ENST00000257604 NUP188Q5SRE5 1749 aa17.05■□□□□ 0.32
TRAFD1-201ENST00000257604 MAGEB6P1A0A0J9YX57 407 aa17.05■□□□□ 0.32
TRAFD1-201ENST00000257604 A0A1B0GVL5 298 aa17.05■□□□□ 0.32
TRAFD1-201ENST00000257604 GSG1L2A8MUP6 293 aa17.05■□□□□ 0.32
TRAFD1-201ENST00000257604 PATL2C9JE40 543 aaKnown RBP17.05■□□□□ 0.32
TRAFD1-201ENST00000257604 CDC27P30260 824 aa17.05■□□□□ 0.32
TRAFD1-201ENST00000257604 HMGN5P82970 282 aaKnown RBP17.05■□□□□ 0.32
TRAFD1-201ENST00000257604 LUZP1Q86V48 1076 aa17.05■□□□□ 0.32
TRAFD1-201ENST00000257604 GJD4Q96KN9 370 aaPredicted RBP17.05■□□□□ 0.32
TRAFD1-201ENST00000257604 SLIT2O94813 1529 aa17.05■□□□□ 0.32
TRAFD1-201ENST00000257604 ZBTB43O43298 467 aa17.05■□□□□ 0.32
TRAFD1-201ENST00000257604 SYNE3Q6ZMZ3 975 aa17.05■□□□□ 0.32
TRAFD1-201ENST00000257604 CCAR1Q8IX12 1150 aaKnown RBP17.05■□□□□ 0.32
TRAFD1-201ENST00000257604 ALG1Q9BT22 464 aa17.05■□□□□ 0.32
TRAFD1-201ENST00000257604 QTRT2Q9H974 415 aaKnown RBP17.05■□□□□ 0.32
TRAFD1-201ENST00000257604 MAP3K11Q16584 847 aa17.04■□□□□ 0.32
TRAFD1-201ENST00000257604 FAM84BQ96KN1 310 aaPredicted RBP17.04■□□□□ 0.32
TRAFD1-201ENST00000257604 TAF1P21675 1872 aa17.04■□□□□ 0.32
TRAFD1-201ENST00000257604 CARMIL3Q8ND23 1372 aa17.04■□□□□ 0.32
TRAFD1-201ENST00000257604 ERICH2A1L162 156 aa17.04■□□□□ 0.32
TRAFD1-201ENST00000257604 NFIXQ14938 502 aa17.04■□□□□ 0.32
TRAFD1-201ENST00000257604 DRC7Q8IY82 874 aa17.04■□□□□ 0.32
TRAFD1-201ENST00000257604 TCRBV5S4A2TA0A5A2 114 aa17.03■□□□□ 0.32
TRAFD1-201ENST00000257604 RPS6KA4O75676 772 aa17.03■□□□□ 0.32
TRAFD1-201ENST00000257604 UBAC1Q9BSL1 405 aa17.03■□□□□ 0.32
TRAFD1-201ENST00000257604 LRRC4BQ9NT99 713 aa17.03■□□□□ 0.32
TRAFD1-201ENST00000257604 NARFQ9UHQ1 456 aa17.03■□□□□ 0.32
TRAFD1-201ENST00000257604 HPS5Q9UPZ3 1129 aa17.03■□□□□ 0.32
TRAFD1-201ENST00000257604 TACC3Q9Y6A5 838 aa17.03■□□□□ 0.32
TRAFD1-201ENST00000257604 BIN1O00499 593 aa17.03■□□□□ 0.32
TRAFD1-201ENST00000257604 DHX16O60231 1041 aaKnown RBP17.03■□□□□ 0.32
TRAFD1-201ENST00000257604 ZNF274Q96GC6 653 aaPredicted RBP17.03■□□□□ 0.32
TRAFD1-201ENST00000257604 CFAP45Q9UL16 551 aa17.03■□□□□ 0.32
TRAFD1-201ENST00000257604 KCNJ14Q9UNX9 436 aa17.03■□□□□ 0.32
TRAFD1-201ENST00000257604 CLIC4Q9Y696 253 aa17.03■□□□□ 0.32
TRAFD1-201ENST00000257604 NUP98P52948 1817 aa17.03■□□□□ 0.32
TRAFD1-201ENST00000257604 JCADQ9P266 1359 aa17.03■□□□□ 0.32
TRAFD1-201ENST00000257604 AP5Z1O43299 807 aa17.03■□□□□ 0.32
TRAFD1-201ENST00000257604 FAM47AQ5JRC9 791 aa17.03■□□□□ 0.32
TRAFD1-201ENST00000257604 SPECC1Q5M775 1068 aa17.03■□□□□ 0.32
TRAFD1-201ENST00000257604 PPP4R3BQ5MIZ7 849 aa17.03■□□□□ 0.32
TRAFD1-201ENST00000257604 ZNF710Q8N1W2 664 aa17.03■□□□□ 0.32
TRAFD1-201ENST00000257604 FSIP1Q8NA03 581 aa17.03■□□□□ 0.32
TRAFD1-201ENST00000257604 MYRIPQ8NFW9 859 aa17.03■□□□□ 0.32
TRAFD1-201ENST00000257604 SDF4Q9BRK5 362 aa17.03■□□□□ 0.32
TRAFD1-201ENST00000257604 RFX7Q2KHR2 1363 aa17.02■□□□□ 0.32
TRAFD1-201ENST00000257604 CNBD1Q8NA66 436 aa17.02■□□□□ 0.32
TRAFD1-201ENST00000257604 DNAJC25Q9H1X3 360 aa17.02■□□□□ 0.32
TRAFD1-201ENST00000257604 PYCARDQ9ULZ3 195 aa17.02■□□□□ 0.32
TRAFD1-201ENST00000257604 BCL9LQ86UU0 1499 aa17.02■□□□□ 0.32
TRAFD1-201ENST00000257604 F8W031 263 aaPredicted RBP17.02■□□□□ 0.31
TRAFD1-201ENST00000257604 HIBADHP31937 336 aaKnown RBP17.02■□□□□ 0.31
TRAFD1-201ENST00000257604 IARSP41252 1262 aaKnown RBP17.02■□□□□ 0.31
TRAFD1-201ENST00000257604 ANO6Q4KMQ2 910 aa17.02■□□□□ 0.31
TRAFD1-201ENST00000257604 APOA5Q6Q788 366 aa17.02■□□□□ 0.31
TRAFD1-201ENST00000257604 CLEC4GQ6UXB4 293 aa17.02■□□□□ 0.31
TRAFD1-201ENST00000257604 CCDC73Q6ZRK6 1079 aa17.02■□□□□ 0.31
TRAFD1-201ENST00000257604 USP17L12C9JPN9 530 aa17.01■□□□□ 0.31
TRAFD1-201ENST00000257604 USP17L21D6R901 530 aa17.01■□□□□ 0.31
TRAFD1-201ENST00000257604 CCDC192P0DO97 292 aa17.01■□□□□ 0.31
TRAFD1-201ENST00000257604 DIXDC1Q155Q3 683 aa17.01■□□□□ 0.31
TRAFD1-201ENST00000257604 AKNAD1Q5T1N1 836 aa17.01■□□□□ 0.31
TRAFD1-201ENST00000257604 CPLX2Q6PUV4 134 aaKnown RBP17.01■□□□□ 0.31
TRAFD1-201ENST00000257604 SMARCC2Q8TAQ2 1214 aa17.01■□□□□ 0.31
TRAFD1-201ENST00000257604 NMT2O60551 498 aa17.01■□□□□ 0.31
TRAFD1-201ENST00000257604 CYP2D6P10635 497 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms