RNA–Protein interactions for RNA: ENST00000257189.4

DSG3-201, Transcript of desmoglein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DSG3, Length 5,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DSG3-201ENST00000257189 PDE1CQ14123 709 aaPredicted RBP9.19□□□□□ -0.94
DSG3-201ENST00000257189 TTF1Q15361 905 aaPredicted RBP9.19□□□□□ -0.94
DSG3-201ENST00000257189 AOPEPQ8N6M6 819 aa9.19□□□□□ -0.94
DSG3-201ENST00000257189 ORC3Q9UBD5 711 aaPredicted RBP9.19□□□□□ -0.94
DSG3-201ENST00000257189 FAM169AQ9Y6X4 670 aa9.19□□□□□ -0.94
DSG3-201ENST00000257189 GOLGA8KD6RF30 607 aa9.19□□□□□ -0.94
DSG3-201ENST00000257189 EVI5O60447 810 aa9.19□□□□□ -0.94
DSG3-201ENST00000257189 BRD2P25440 801 aaKnown RBP9.19□□□□□ -0.94
DSG3-201ENST00000257189 RAB3GAP1Q15042 981 aa9.19□□□□□ -0.94
DSG3-201ENST00000257189 LGSNQ5TDP6 509 aa9.19□□□□□ -0.94
DSG3-201ENST00000257189 UBLCP1Q8WVY7 318 aaPredicted RBP9.19□□□□□ -0.94
DSG3-201ENST00000257189 TSR2Q969E8 191 aaKnown RBP9.19□□□□□ -0.94
DSG3-201ENST00000257189 GJD4Q96KN9 370 aaPredicted RBP9.19□□□□□ -0.94
DSG3-201ENST00000257189 PTPRCP08575 1304 aa9.19□□□□□ -0.94
DSG3-201ENST00000257189 SLMAPQ14BN4 828 aa9.18□□□□□ -0.94
DSG3-201ENST00000257189 PPP1R7Q15435 360 aa9.18□□□□□ -0.94
DSG3-201ENST00000257189 WHAMMQ8TF30 809 aa9.18□□□□□ -0.94
DSG3-201ENST00000257189 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.18□□□□□ -0.94
DSG3-201ENST00000257189 TTC36A6NLP5 189 aa9.18□□□□□ -0.94
DSG3-201ENST00000257189 B4DLN1 442 aa9.18□□□□□ -0.94
DSG3-201ENST00000257189 ECE1P42892 770 aa9.18□□□□□ -0.94
DSG3-201ENST00000257189 USP5P45974 858 aa9.18□□□□□ -0.94
DSG3-201ENST00000257189 MRPL12P52815 198 aaKnown RBP9.18□□□□□ -0.94
DSG3-201ENST00000257189 C8orf74Q6P047 294 aa9.18□□□□□ -0.94
DSG3-201ENST00000257189 NEK11Q8NG66 645 aa9.18□□□□□ -0.94
DSG3-201ENST00000257189 PARP2Q9UGN5 583 aa9.18□□□□□ -0.94
DSG3-201ENST00000257189 ELP1O95163 1332 aa9.18□□□□□ -0.94
DSG3-201ENST00000257189 RHOXF2BP0C7M4 288 aa9.18□□□□□ -0.94
DSG3-201ENST00000257189 ZKSCAN8Q15776 578 aaPredicted RBP9.18□□□□□ -0.94
DSG3-201ENST00000257189 LRRC23Q53EV4 343 aaPredicted RBP9.18□□□□□ -0.94
DSG3-201ENST00000257189 DUSP27Q5VZP5 1158 aa9.18□□□□□ -0.94
DSG3-201ENST00000257189 PNMA8AQ86V59 439 aaPredicted RBP9.18□□□□□ -0.94
DSG3-201ENST00000257189 CFAP43Q8NDM7 1665 aa9.18□□□□□ -0.94
DSG3-201ENST00000257189 SMARCC2Q8TAQ2 1214 aa9.18□□□□□ -0.94
DSG3-201ENST00000257189 IFT81Q8WYA0 676 aa9.18□□□□□ -0.94
DSG3-201ENST00000257189 RHOXF2Q9BQY4 288 aa9.18□□□□□ -0.94
DSG3-201ENST00000257189 PCDH11XQ9BZA7 1347 aa9.18□□□□□ -0.94
DSG3-201ENST00000257189 PCDH11YQ9BZA8 1340 aa9.18□□□□□ -0.94
DSG3-201ENST00000257189 CABP5Q9NP86 173 aa9.18□□□□□ -0.94
DSG3-201ENST00000257189 MED4Q9NPJ6 270 aa9.18□□□□□ -0.94
DSG3-201ENST00000257189 RNF216Q9NWF9 866 aaPredicted RBP9.18□□□□□ -0.94
DSG3-201ENST00000257189 SATB2Q9UPW6 733 aa9.18□□□□□ -0.94
DSG3-201ENST00000257189 USP16Q9Y5T5 823 aa9.18□□□□□ -0.94
DSG3-201ENST00000257189 NSD3Q9BZ95 1437 aa9.18□□□□□ -0.94
DSG3-201ENST00000257189 AKR1B15C9JRZ8 316 aaPredicted RBP9.18□□□□□ -0.94
DSG3-201ENST00000257189 PHACTR2O75167 634 aa9.18□□□□□ -0.94
DSG3-201ENST00000257189 F13A1P00488 732 aa9.18□□□□□ -0.94
DSG3-201ENST00000257189 MYCP01106 439 aaPredicted RBP9.18□□□□□ -0.94
DSG3-201ENST00000257189 IDEP14735 1019 aa9.18□□□□□ -0.94
DSG3-201ENST00000257189 MAP3K7CLP57077 242 aa9.18□□□□□ -0.94
DSG3-201ENST00000257189 NFE2L2Q16236 605 aa9.18□□□□□ -0.94
DSG3-201ENST00000257189 INF2Q27J81 1249 aa9.18□□□□□ -0.94
DSG3-201ENST00000257189 SULT6B1Q6IMI4 303 aa9.18□□□□□ -0.94
DSG3-201ENST00000257189 SYCP3Q8IZU3 236 aa9.18□□□□□ -0.94
DSG3-201ENST00000257189 BAG1Q99933 345 aaPredicted RBP9.18□□□□□ -0.94
DSG3-201ENST00000257189 UTP11Q9Y3A2 253 aaKnown RBP9.18□□□□□ -0.94
DSG3-201ENST00000257189 ZNF131P52739 623 aa9.18□□□□□ -0.94
DSG3-201ENST00000257189 PPP2R5EQ16537 467 aa9.18□□□□□ -0.94
DSG3-201ENST00000257189 NEK1Q96PY6 1258 aa9.18□□□□□ -0.94
DSG3-201ENST00000257189 TLDC2A0PJX2 215 aa9.17□□□□□ -0.94
DSG3-201ENST00000257189 IFIT3O14879 490 aaKnown RBP9.17□□□□□ -0.94
DSG3-201ENST00000257189 SNCBQ16143 134 aa9.17□□□□□ -0.94
DSG3-201ENST00000257189 USP48Q86UV5 1035 aa9.17□□□□□ -0.94
DSG3-201ENST00000257189 EFCAB13Q8IY85 973 aa9.17□□□□□ -0.94
DSG3-201ENST00000257189 TMX3Q96JJ7 454 aa9.17□□□□□ -0.94
DSG3-201ENST00000257189 ATP6V0A2Q9Y487 856 aa9.17□□□□□ -0.94
DSG3-201ENST00000257189 RTL1A6NKG5 1358 aa9.17□□□□□ -0.94
DSG3-201ENST00000257189 I3L4J1 428 aa9.17□□□□□ -0.94
DSG3-201ENST00000257189 IFIT1P09914 478 aaKnown RBP9.17□□□□□ -0.94
DSG3-201ENST00000257189 TBC1D9Q6ZT07 1266 aa9.17□□□□□ -0.94
DSG3-201ENST00000257189 CCT6BQ92526 530 aa9.17□□□□□ -0.94
DSG3-201ENST00000257189 U2AF2P26368 475 aaKnown RBP eCLIP9.17□□□□□ -0.94
DSG3-201ENST00000257189 PDCD2Q16342 344 aaPredicted RBP9.17□□□□□ -0.94
DSG3-201ENST00000257189 CCDC65Q8IXS2 484 aa9.17□□□□□ -0.94
DSG3-201ENST00000257189 NCOA7Q8NI08 942 aa9.17□□□□□ -0.94
DSG3-201ENST00000257189 IL1RAPL2Q9NP60 686 aa9.17□□□□□ -0.94
DSG3-201ENST00000257189 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.17□□□□□ -0.94
DSG3-201ENST00000257189 IDH1O75874 414 aaKnown RBP9.17□□□□□ -0.94
DSG3-201ENST00000257189 OAS2P29728 719 aaKnown RBP9.17□□□□□ -0.94
DSG3-201ENST00000257189 MAIP1Q8WWC4 291 aa9.17□□□□□ -0.94
DSG3-201ENST00000257189 EPSTI1Q96J88 318 aa9.17□□□□□ -0.94
DSG3-201ENST00000257189 CAPZA3Q96KX2 299 aa9.17□□□□□ -0.94
DSG3-201ENST00000257189 TFIP11Q9UBB9 837 aaKnown RBP9.17□□□□□ -0.94
DSG3-201ENST00000257189 BAIAP2L1Q9UHR4 511 aa9.17□□□□□ -0.94
DSG3-201ENST00000257189 PUF60Q9UHX1 559 aaKnown RBP9.17□□□□□ -0.94
DSG3-201ENST00000257189 GAS8O95995 478 aa9.16□□□□□ -0.94
DSG3-201ENST00000257189 TROVE2P10155 538 aaKnown RBP eCLIP9.16□□□□□ -0.94
DSG3-201ENST00000257189 ERCC3P19447 782 aa9.16□□□□□ -0.94
DSG3-201ENST00000257189 PTGS1P23219 599 aa9.16□□□□□ -0.94
DSG3-201ENST00000257189 STAT6P42226 847 aa9.16□□□□□ -0.94
DSG3-201ENST00000257189 RARSP54136 660 aaKnown RBP9.16□□□□□ -0.94
DSG3-201ENST00000257189 RILPL1Q5EBL4 403 aa9.16□□□□□ -0.94
DSG3-201ENST00000257189 SRGAP1Q7Z6B7 1085 aa9.16□□□□□ -0.94
DSG3-201ENST00000257189 RASEFQ8IZ41 740 aa9.16□□□□□ -0.94
DSG3-201ENST00000257189 PDCD7Q8N8D1 485 aaKnown RBP9.16□□□□□ -0.94
DSG3-201ENST00000257189 C2orf69Q8N8R5 385 aa9.16□□□□□ -0.94
DSG3-201ENST00000257189 ZNF830Q96NB3 372 aaPredicted RBP9.16□□□□□ -0.94
DSG3-201ENST00000257189 NUP58Q9BVL2 599 aa9.16□□□□□ -0.94
DSG3-201ENST00000257189 MKNK2Q9HBH9 465 aa9.16□□□□□ -0.94
DSG3-201ENST00000257189 ZC4H2Q9NQZ6 224 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms