RNA–Protein interactions for RNA: ENST00000254325.8

RFX1-201, Transcript of regulatory factor X1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFX1, Length 4,332 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-201ENST00000254325 STRBPQ96SI9 672 aaKnown RBP18.2■□□□□ 0.5
RFX1-201ENST00000254325 CBX8Q9HC52 389 aa18.2■□□□□ 0.5
RFX1-201ENST00000254325 TFCP2L1Q9NZI6 479 aa18.2■□□□□ 0.5
RFX1-201ENST00000254325 CLIP2Q9UDT6 1046 aa18.2■□□□□ 0.5
RFX1-201ENST00000254325 ITPK1Q13572 414 aa18.19■□□□□ 0.5
RFX1-201ENST00000254325 FBXO18Q8NFZ0 1043 aa18.19■□□□□ 0.5
RFX1-201ENST00000254325 ZNF592Q92610 1267 aa18.19■□□□□ 0.5
RFX1-201ENST00000254325 ISM2Q6H9L7 571 aa18.19■□□□□ 0.5
RFX1-201ENST00000254325 MB21D2Q8IYB1 491 aaPredicted RBP18.19■□□□□ 0.5
RFX1-201ENST00000254325 CRNKL1Q9BZJ0 848 aaKnown RBP18.19■□□□□ 0.5
RFX1-201ENST00000254325 HSP90AA2PQ14568 343 aaPredicted RBP18.19■□□□□ 0.5
RFX1-201ENST00000254325 KRT40Q6A162 431 aa18.19■□□□□ 0.5
RFX1-201ENST00000254325 TBC1D10CQ8IV04 446 aa18.19■□□□□ 0.5
RFX1-201ENST00000254325 SDR42E1Q8WUS8 393 aa18.19■□□□□ 0.5
RFX1-201ENST00000254325 PARP4Q9UKK3 1724 aaKnown RBP18.19■□□□□ 0.5
RFX1-201ENST00000254325 ANO1Q5XXA6 986 aa18.19■□□□□ 0.5
RFX1-201ENST00000254325 CDK11BP21127 795 aaKnown RBP18.18■□□□□ 0.5
RFX1-201ENST00000254325 RPS8P62241 208 aaKnown RBP18.18■□□□□ 0.5
RFX1-201ENST00000254325 MYSM1Q5VVJ2 828 aa18.18■□□□□ 0.5
RFX1-201ENST00000254325 CTCFLQ8NI51 663 aaPredicted RBP18.18■□□□□ 0.5
RFX1-201ENST00000254325 UBE2Q2Q8WVN8 375 aa18.18■□□□□ 0.5
RFX1-201ENST00000254325 RPGRQ92834 1020 aaKnown RBP18.18■□□□□ 0.5
RFX1-201ENST00000254325 ZMYM6O95789 1325 aa18.18■□□□□ 0.5
RFX1-201ENST00000254325 PRDM1O75626 825 aa18.18■□□□□ 0.5
RFX1-201ENST00000254325 CAMTA2O94983 1202 aa18.18■□□□□ 0.5
RFX1-201ENST00000254325 SYKP43405 635 aa18.18■□□□□ 0.5
RFX1-201ENST00000254325 IFIT1BQ5T764 474 aaKnown RBP18.18■□□□□ 0.5
RFX1-201ENST00000254325 APOA5Q6Q788 366 aa18.18■□□□□ 0.5
RFX1-201ENST00000254325 LCORLQ8N3X6 602 aa18.18■□□□□ 0.5
RFX1-201ENST00000254325 PGBD1Q96JS3 809 aa18.18■□□□□ 0.5
RFX1-201ENST00000254325 USP21Q9UK80 565 aa18.18■□□□□ 0.5
RFX1-201ENST00000254325 INTS5Q6P9B9 1019 aaKnown RBP18.17■□□□□ 0.5
RFX1-201ENST00000254325 CREBRFQ8IUR6 639 aa18.17■□□□□ 0.5
RFX1-201ENST00000254325 PDLIM2Q96JY6 352 aa18.17■□□□□ 0.5
RFX1-201ENST00000254325 OFD1O75665 1012 aa18.17■□□□□ 0.5
RFX1-201ENST00000254325 ARID4AP29374 1257 aaPredicted RBP18.17■□□□□ 0.5
RFX1-201ENST00000254325 HIBADHP31937 336 aaKnown RBP18.17■□□□□ 0.5
RFX1-201ENST00000254325 ERCC4Q92889 916 aaPredicted RBP18.17■□□□□ 0.5
RFX1-201ENST00000254325 ANKRD2Q9GZV1 360 aa18.17■□□□□ 0.5
RFX1-201ENST00000254325 INCENPQ9NQS7 918 aa18.17■□□□□ 0.5
RFX1-201ENST00000254325 RCOR1Q9UKL0 485 aa18.17■□□□□ 0.5
RFX1-201ENST00000254325 GJB4Q9NTQ9 266 aa18.17■□□□□ 0.5
RFX1-201ENST00000254325 CCDC186Q7Z3E2 898 aa18.17■□□□□ 0.5
RFX1-201ENST00000254325 UQCRHLA0A096LP55 91 aa18.16■□□□□ 0.5
RFX1-201ENST00000254325 TSPY2A6NKD2 308 aa18.16■□□□□ 0.5
RFX1-201ENST00000254325 UQCRHP07919 91 aa18.16■□□□□ 0.5
RFX1-201ENST00000254325 SMIM5Q71RC9 77 aa18.16■□□□□ 0.5
RFX1-201ENST00000254325 MRVI1Q9Y6F6 885 aa18.16■□□□□ 0.5
RFX1-201ENST00000254325 A0A0U1RQG5 324 aaPredicted RBP18.16■□□□□ 0.5
RFX1-201ENST00000254325 TPD52L1Q16890 204 aaPredicted RBP18.16■□□□□ 0.5
RFX1-201ENST00000254325 MKNK2Q9HBH9 465 aa18.16■□□□□ 0.5
RFX1-201ENST00000254325 TNS2Q63HR2 1409 aa18.16■□□□□ 0.5
RFX1-201ENST00000254325 PPARAQ07869 468 aa18.16■□□□□ 0.5
RFX1-201ENST00000254325 CNNM3Q8NE01 707 aa18.16■□□□□ 0.5
RFX1-201ENST00000254325 PCDHA7Q9UN72 937 aa18.16■□□□□ 0.5
RFX1-201ENST00000254325 SH2B2O14492 632 aaPredicted RBP18.15■□□□□ 0.5
RFX1-201ENST00000254325 UBE4AQ14139 1066 aa18.15■□□□□ 0.5
RFX1-201ENST00000254325 CYB5R4Q7L1T6 521 aa18.15■□□□□ 0.5
RFX1-201ENST00000254325 AOPEPQ8N6M6 819 aa18.15■□□□□ 0.5
RFX1-201ENST00000254325 SRP68Q9UHB9 627 aaKnown RBP18.15■□□□□ 0.5
RFX1-201ENST00000254325 CLIC4Q9Y696 253 aa18.15■□□□□ 0.5
RFX1-201ENST00000254325 CTDNEP1O95476 244 aa18.15■□□□□ 0.5
RFX1-201ENST00000254325 SPTY2D1Q68D10 685 aaPredicted RBP18.15■□□□□ 0.5
RFX1-201ENST00000254325 CEP131Q9UPN4 1083 aa18.15■□□□□ 0.5
RFX1-201ENST00000254325 TRAPPC3LQ5T215 181 aa18.15■□□□□ 0.5
RFX1-201ENST00000254325 CLEC4GQ6UXB4 293 aa18.15■□□□□ 0.5
RFX1-201ENST00000254325 AIFM3Q96NN9 605 aa18.15■□□□□ 0.5
RFX1-201ENST00000254325 ZSWIM5Q9P217 1185 aa18.15■□□□□ 0.5
RFX1-201ENST00000254325 PDE4BQ07343 736 aa18.14■□□□□ 0.5
RFX1-201ENST00000254325 NOLC1Q14978 699 aaKnown RBP eCLIP18.14■□□□□ 0.5
RFX1-201ENST00000254325 YEATS4O95619 227 aa18.14■□□□□ 0.49
RFX1-201ENST00000254325 SERPINC1P01008 464 aa18.14■□□□□ 0.49
RFX1-201ENST00000254325 ZNF512BQ96KM6 892 aaPredicted RBP18.14■□□□□ 0.49
RFX1-201ENST00000254325 KCPQ6ZWJ8 1503 aa18.14■□□□□ 0.49
RFX1-201ENST00000254325 SMTNL1A8MU46 457 aa18.14■□□□□ 0.49
RFX1-201ENST00000254325 ADALQ6DHV7 355 aa18.14■□□□□ 0.49
RFX1-201ENST00000254325 CMTR1Q8N1G2 835 aaKnown RBP18.14■□□□□ 0.49
RFX1-201ENST00000254325 AATFQ9NY61 560 aaKnown RBP eCLIP18.14■□□□□ 0.49
RFX1-201ENST00000254325 PTGS1P23219 599 aa18.14■□□□□ 0.49
RFX1-201ENST00000254325 SPATA31A5Q5VU36 1347 aa18.14■□□□□ 0.49
RFX1-201ENST00000254325 SPATA31A7Q8IWB4 1347 aa18.14■□□□□ 0.49
RFX1-201ENST00000254325 RBM10P98175 930 aaKnown RBP18.13■□□□□ 0.49
RFX1-201ENST00000254325 PDILTQ8N807 584 aa18.13■□□□□ 0.49
RFX1-201ENST00000254325 NEDD4P46934 1319 aa18.13■□□□□ 0.49
RFX1-201ENST00000254325 RTEL1Q9NZ71 1219 aa18.13■□□□□ 0.49
RFX1-201ENST00000254325 RTL9Q8NET4 1388 aa18.13■□□□□ 0.49
RFX1-201ENST00000254325 ANTXR2P58335 489 aa18.12■□□□□ 0.49
RFX1-201ENST00000254325 KCNJ14Q9UNX9 436 aa18.12■□□□□ 0.49
RFX1-201ENST00000254325 NTSR2O95665 410 aa18.12■□□□□ 0.49
RFX1-201ENST00000254325 DIS3L2Q8IYB7 885 aaKnown RBP18.12■□□□□ 0.49
RFX1-201ENST00000254325 MCM9Q9NXL9 1143 aa18.12■□□□□ 0.49
RFX1-201ENST00000254325 COL18A1P39060 1754 aa18.12■□□□□ 0.49
RFX1-201ENST00000254325 C17orf53Q8N3J3 647 aaPredicted RBP18.12■□□□□ 0.49
RFX1-201ENST00000254325 ZNF654Q8IZM8 581 aa18.12■□□□□ 0.49
RFX1-201ENST00000254325 CNBD1Q8NA66 436 aa18.12■□□□□ 0.49
RFX1-201ENST00000254325 STRCP1A6NGW2 1772 aa18.11■□□□□ 0.49
RFX1-201ENST00000254325 ARFGEF2Q9Y6D5 1785 aa18.11■□□□□ 0.49
RFX1-201ENST00000254325 DEXIO95424 95 aa18.11■□□□□ 0.49
RFX1-201ENST00000254325 KIF23Q02241 960 aaPredicted RBP18.11■□□□□ 0.49
RFX1-201ENST00000254325 N4BP2Q86UW6 1770 aaPredicted RBP18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms