RNA–Protein interactions for RNA: ENST00000254181.8

USP29-201, Transcript of ubiquitin specific peptidase 29, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP29, Length 3,705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP29-201ENST00000254181 CTAGE6Q86UF2 777 aa8.65□□□□□ -1.03
USP29-201ENST00000254181 CTAGE4Q8IX94 777 aa8.65□□□□□ -1.03
USP29-201ENST00000254181 WDR66Q8TBY9 1149 aa8.65□□□□□ -1.03
USP29-201ENST00000254181 INTS4Q96HW7 963 aaKnown RBP8.65□□□□□ -1.03
USP29-201ENST00000254181 PHACTR1Q9C0D0 580 aa8.65□□□□□ -1.03
USP29-201ENST00000254181 IFNKQ9P0W0 207 aa8.65□□□□□ -1.03
USP29-201ENST00000254181 DMGDHQ9UI17 866 aaKnown RBP8.65□□□□□ -1.03
USP29-201ENST00000254181 BLOC1S6Q9UL45 172 aa8.65□□□□□ -1.03
USP29-201ENST00000254181 SCINQ9Y6U3 715 aa8.65□□□□□ -1.03
USP29-201ENST00000254181 PHLPP2Q6ZVD8 1323 aa8.65□□□□□ -1.03
USP29-201ENST00000254181 LRRD1A4D1F6 860 aa8.64□□□□□ -1.03
USP29-201ENST00000254181 GNAI1P63096 354 aa8.64□□□□□ -1.03
USP29-201ENST00000254181 PPARDQ03181 441 aa8.64□□□□□ -1.03
USP29-201ENST00000254181 STIM1Q13586 685 aa8.64□□□□□ -1.03
USP29-201ENST00000254181 PPP2R5BQ15173 497 aa8.64□□□□□ -1.03
USP29-201ENST00000254181 TSNAXIP1Q2TAA8 658 aa8.64□□□□□ -1.03
USP29-201ENST00000254181 CFAP100Q494V2 611 aa8.64□□□□□ -1.03
USP29-201ENST00000254181 SLF2Q8IX21 1173 aa8.64□□□□□ -1.03
USP29-201ENST00000254181 CAGE1Q8TC20 777 aa8.64□□□□□ -1.03
USP29-201ENST00000254181 C17orf50Q8WW18 174 aa8.64□□□□□ -1.03
USP29-201ENST00000254181 TCP11Q8WWU5 503 aa8.64□□□□□ -1.03
USP29-201ENST00000254181 UTP6Q9NYH9 597 aaKnown RBP8.64□□□□□ -1.03
USP29-201ENST00000254181 ZNF131P52739 623 aa8.64□□□□□ -1.03
USP29-201ENST00000254181 SH3BGRP55822 239 aaPredicted RBP8.64□□□□□ -1.03
USP29-201ENST00000254181 FNBP4Q8N3X1 1017 aaPredicted RBP8.64□□□□□ -1.03
USP29-201ENST00000254181 IGSF22Q8N9C0 903 aa8.64□□□□□ -1.03
USP29-201ENST00000254181 CCDC148Q8NFR7 591 aa8.64□□□□□ -1.03
USP29-201ENST00000254181 LZTS2Q9BRK4 669 aa8.64□□□□□ -1.03
USP29-201ENST00000254181 YIPF2Q9BWQ6 316 aa8.64□□□□□ -1.03
USP29-201ENST00000254181 ANO10Q9NW15 660 aa8.64□□□□□ -1.03
USP29-201ENST00000254181 IL16Q14005 1332 aa8.64□□□□□ -1.03
USP29-201ENST00000254181 CEP104O60308 925 aa8.64□□□□□ -1.03
USP29-201ENST00000254181 IMPDH2P12268 514 aa8.64□□□□□ -1.03
USP29-201ENST00000254181 SLC8A3P57103 927 aa8.64□□□□□ -1.03
USP29-201ENST00000254181 CCZ1BP86790 482 aa8.64□□□□□ -1.03
USP29-201ENST00000254181 CCZ1P86791 482 aaPredicted RBP8.64□□□□□ -1.03
USP29-201ENST00000254181 POLA2Q14181 598 aa8.64□□□□□ -1.03
USP29-201ENST00000254181 MAP7D1Q3KQU3 841 aa8.64□□□□□ -1.03
USP29-201ENST00000254181 CCDC178Q5BJE1 867 aa8.64□□□□□ -1.03
USP29-201ENST00000254181 CCDC83Q8IWF9 413 aa8.64□□□□□ -1.03
USP29-201ENST00000254181 ELOA2Q8IYF1 753 aaPredicted RBP8.64□□□□□ -1.03
USP29-201ENST00000254181 NSMCE1Q8WV22 266 aa8.64□□□□□ -1.03
USP29-201ENST00000254181 DDX20Q9UHI6 824 aaKnown RBP8.64□□□□□ -1.03
USP29-201ENST00000254181 ZNF330Q9Y3S2 320 aaPredicted RBP8.64□□□□□ -1.03
USP29-201ENST00000254181 SYNJ1O43426 1573 aa8.63□□□□□ -1.03
USP29-201ENST00000254181 ZNF521Q96K83 1311 aa8.63□□□□□ -1.03
USP29-201ENST00000254181 MEFVO15553 781 aaPredicted RBP8.63□□□□□ -1.03
USP29-201ENST00000254181 RTN3O95197 1032 aaPredicted RBP8.63□□□□□ -1.03
USP29-201ENST00000254181 MYL1P05976 194 aa8.63□□□□□ -1.03
USP29-201ENST00000254181 FAM163BP0C2L3 166 aa8.63□□□□□ -1.03
USP29-201ENST00000254181 CNGA1P29973 690 aa8.63□□□□□ -1.03
USP29-201ENST00000254181 DDR1Q08345 913 aa8.63□□□□□ -1.03
USP29-201ENST00000254181 SYCP2LQ5T4T6 812 aa8.63□□□□□ -1.03
USP29-201ENST00000254181 E4F1Q66K89 784 aaPredicted RBP8.63□□□□□ -1.03
USP29-201ENST00000254181 CEP128Q6ZU80 1094 aa8.63□□□□□ -1.03
USP29-201ENST00000254181 RBM33Q96EV2 1170 aaKnown RBP8.63□□□□□ -1.03
USP29-201ENST00000254181 KAT14Q9H8E8 782 aa8.63□□□□□ -1.03
USP29-201ENST00000254181 PPCSQ9HAB8 311 aa8.63□□□□□ -1.03
USP29-201ENST00000254181 ERCC6Q03468 1493 aa8.63□□□□□ -1.03
USP29-201ENST00000254181 EVC2Q86UK5 1308 aa8.63□□□□□ -1.03
USP29-201ENST00000254181 GJA8P48165 433 aa8.63□□□□□ -1.03
USP29-201ENST00000254181 PLEKHG6Q3KR16 790 aa8.63□□□□□ -1.03
USP29-201ENST00000254181 VPS53Q5VIR6 699 aa8.63□□□□□ -1.03
USP29-201ENST00000254181 CCDC174Q6PII3 467 aa8.63□□□□□ -1.03
USP29-201ENST00000254181 TMEM110Q86TL2 294 aa8.63□□□□□ -1.03
USP29-201ENST00000254181 NCAPG2Q86XI2 1143 aa8.63□□□□□ -1.03
USP29-201ENST00000254181 UNC45AQ9H3U1 944 aa8.63□□□□□ -1.03
USP29-201ENST00000254181 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.63□□□□□ -1.03
USP29-201ENST00000254181 TMOD4Q9NZQ9 345 aa8.63□□□□□ -1.03
USP29-201ENST00000254181 H3BQV1 296 aa8.63□□□□□ -1.03
USP29-201ENST00000254181 CDC25BP30305 580 aa8.63□□□□□ -1.03
USP29-201ENST00000254181 ATP1A2P50993 1020 aa8.63□□□□□ -1.03
USP29-201ENST00000254181 SESN3P58005 492 aa8.63□□□□□ -1.03
USP29-201ENST00000254181 IFFO2Q5TF58 517 aa8.63□□□□□ -1.03
USP29-201ENST00000254181 TCHPQ9BT92 498 aa8.63□□□□□ -1.03
USP29-201ENST00000254181 TSPYL2Q9H2G4 693 aaPredicted RBP8.63□□□□□ -1.03
USP29-201ENST00000254181 ATP6V0A4Q9HBG4 840 aa8.63□□□□□ -1.03
USP29-201ENST00000254181 SLC40A1Q9NP59 571 aa8.63□□□□□ -1.03
USP29-201ENST00000254181 COL4A3BPQ9Y5P4 624 aa8.63□□□□□ -1.03
USP29-201ENST00000254181 GPRASP1Q5JY77 1395 aa8.62□□□□□ -1.03
USP29-201ENST00000254181 PTPN23Q9H3S7 1636 aa8.62□□□□□ -1.03
USP29-201ENST00000254181 TOP1P11387 765 aaKnown RBP8.62□□□□□ -1.03
USP29-201ENST00000254181 SLC7A5Q01650 507 aa8.62□□□□□ -1.03
USP29-201ENST00000254181 PPFIA1Q13136 1202 aa8.62□□□□□ -1.03
USP29-201ENST00000254181 TTC22Q5TAA0 569 aa8.62□□□□□ -1.03
USP29-201ENST00000254181 FAM173BQ6P4H8 233 aa8.62□□□□□ -1.03
USP29-201ENST00000254181 SPATS2Q86XZ4 545 aaKnown RBP8.62□□□□□ -1.03
USP29-201ENST00000254181 MFN1Q8IWA4 741 aa8.62□□□□□ -1.03
USP29-201ENST00000254181 SSH1Q8WYL5 1049 aa8.62□□□□□ -1.03
USP29-201ENST00000254181 DHX58Q96C10 678 aa8.62□□□□□ -1.03
USP29-201ENST00000254181 PLEKHG4BQ96PX9 1271 aa8.62□□□□□ -1.03
USP29-201ENST00000254181 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.62□□□□□ -1.03
USP29-201ENST00000254181 PCK1P35558 622 aa8.62□□□□□ -1.03
USP29-201ENST00000254181 SLMAPQ14BN4 828 aa8.62□□□□□ -1.03
USP29-201ENST00000254181 PPP1R7Q15435 360 aa8.62□□□□□ -1.03
USP29-201ENST00000254181 OLFML1Q6UWY5 402 aa8.62□□□□□ -1.03
USP29-201ENST00000254181 TRMT2AQ8IZ69 625 aaKnown RBP8.62□□□□□ -1.03
USP29-201ENST00000254181 C8orf37Q96NL8 207 aa8.62□□□□□ -1.03
USP29-201ENST00000254181 ALS2CR12Q96Q35 445 aa8.62□□□□□ -1.03
USP29-201ENST00000254181 LZTFL1Q9NQ48 299 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms