RNA–Protein interactions for RNA: ENST00000252108.7

UBE4A-201, Transcript of ubiquitination factor E4A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE4A, Length 6,103 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-201ENST00000252108 SFPQP23246 707 aaKnown RBP eCLIP4.81□□□□□ -1.64
UBE4A-201ENST00000252108 PDIA3P30101 505 aaKnown RBP4.81□□□□□ -1.64
UBE4A-201ENST00000252108 MCAMP43121 646 aa4.81□□□□□ -1.64
UBE4A-201ENST00000252108 TRIM29Q14134 588 aa4.81□□□□□ -1.64
UBE4A-201ENST00000252108 NCAPHQ15003 741 aa4.81□□□□□ -1.64
UBE4A-201ENST00000252108 HLFQ16534 295 aa4.81□□□□□ -1.64
UBE4A-201ENST00000252108 CCDC83Q8IWF9 413 aa4.81□□□□□ -1.64
UBE4A-201ENST00000252108 SPATA20Q8TB22 786 aa4.81□□□□□ -1.64
UBE4A-201ENST00000252108 CLSTN2Q9H4D0 955 aa4.81□□□□□ -1.64
UBE4A-201ENST00000252108 JAK2O60674 1132 aa4.81□□□□□ -1.64
UBE4A-201ENST00000252108 CDKL5O76039 1030 aa4.81□□□□□ -1.64
UBE4A-201ENST00000252108 CTR9Q6PD62 1173 aa4.81□□□□□ -1.64
UBE4A-201ENST00000252108 LMBR1LQ6UX01 489 aa4.81□□□□□ -1.64
UBE4A-201ENST00000252108 CCDC129Q6ZRS4 1044 aa4.81□□□□□ -1.64
UBE4A-201ENST00000252108 UBXN4Q92575 508 aa4.81□□□□□ -1.64
UBE4A-201ENST00000252108 DENND2AQ9ULE3 1009 aa4.81□□□□□ -1.64
UBE4A-201ENST00000252108 E7EWF7 191 aa4.81□□□□□ -1.64
UBE4A-201ENST00000252108 CBX1P83916 185 aa4.81□□□□□ -1.64
UBE4A-201ENST00000252108 MDM2Q00987 491 aaPredicted RBP4.81□□□□□ -1.64
UBE4A-201ENST00000252108 FMR1NBQ8N0W7 255 aaPredicted RBP4.81□□□□□ -1.64
UBE4A-201ENST00000252108 GDPD2Q9HCC8 539 aa4.81□□□□□ -1.64
UBE4A-201ENST00000252108 EPB41L4AQ9HCS5 686 aaPredicted RBP4.81□□□□□ -1.64
UBE4A-201ENST00000252108 SPATA31A1Q5TZJ5 1347 aa4.81□□□□□ -1.64
UBE4A-201ENST00000252108 ADORA1P30542 326 aa4.8□□□□□ -1.64
UBE4A-201ENST00000252108 FOXD4L6Q3SYB3 417 aaPredicted RBP4.8□□□□□ -1.64
UBE4A-201ENST00000252108 TPRNQ4KMQ1 711 aa4.8□□□□□ -1.64
UBE4A-201ENST00000252108 HSP90B2PQ58FF3 399 aa4.8□□□□□ -1.64
UBE4A-201ENST00000252108 FOXD4L3Q6VB84 417 aaPredicted RBP4.8□□□□□ -1.64
UBE4A-201ENST00000252108 SGMS1Q86VZ5 419 aa4.8□□□□□ -1.64
UBE4A-201ENST00000252108 MED15Q96RN5 788 aa4.8□□□□□ -1.64
UBE4A-201ENST00000252108 DNAJC2Q99543 621 aaKnown RBP4.8□□□□□ -1.64
UBE4A-201ENST00000252108 ARID3AQ99856 593 aa4.8□□□□□ -1.64
UBE4A-201ENST00000252108 BPIFA3Q9BQP9 254 aa4.8□□□□□ -1.64
UBE4A-201ENST00000252108 CAMTA2O94983 1202 aa4.8□□□□□ -1.64
UBE4A-201ENST00000252108 NOVP48745 357 aa4.8□□□□□ -1.64
UBE4A-201ENST00000252108 DHX40Q8IX18 779 aaKnown RBP4.8□□□□□ -1.64
UBE4A-201ENST00000252108 MRFAP1L1Q96HT8 127 aa4.8□□□□□ -1.64
UBE4A-201ENST00000252108 NAP1L2Q9ULW6 460 aaPredicted RBP4.8□□□□□ -1.64
UBE4A-201ENST00000252108 CPLX1O14810 134 aa4.8□□□□□ -1.64
UBE4A-201ENST00000252108 NTSR2O95665 410 aa4.8□□□□□ -1.64
UBE4A-201ENST00000252108 STK38Q15208 465 aa4.8□□□□□ -1.64
UBE4A-201ENST00000252108 LEKR1Q6ZMV7 388 aa4.8□□□□□ -1.64
UBE4A-201ENST00000252108 IGDCC4Q8TDY8 1250 aa4.8□□□□□ -1.64
UBE4A-201ENST00000252108 BOLA2Q9H3K6 86 aa4.8□□□□□ -1.64
UBE4A-201ENST00000252108 PAG1Q9NWQ8 432 aa4.8□□□□□ -1.64
UBE4A-201ENST00000252108 MKRN1Q9UHC7 482 aaKnown RBP4.8□□□□□ -1.64
UBE4A-201ENST00000252108 ADD2P35612 726 aa4.8□□□□□ -1.64
UBE4A-201ENST00000252108 ZNF75DP51815 510 aa4.8□□□□□ -1.64
UBE4A-201ENST00000252108 RBM6P78332 1123 aaKnown RBP4.8□□□□□ -1.64
UBE4A-201ENST00000252108 NT5DC1Q5TFE4 455 aa4.8□□□□□ -1.64
UBE4A-201ENST00000252108 NECAB1Q8N987 351 aa4.8□□□□□ -1.64
UBE4A-201ENST00000252108 TNFRSF25Q93038 417 aa4.8□□□□□ -1.64
UBE4A-201ENST00000252108 SMARCE1Q969G3 411 aa4.8□□□□□ -1.64
UBE4A-201ENST00000252108 MTA3Q9BTC8 594 aa4.8□□□□□ -1.64
UBE4A-201ENST00000252108 PUS7LQ9H0K6 701 aaKnown RBP4.8□□□□□ -1.64
UBE4A-201ENST00000252108 CWC25Q9NXE8 425 aaPredicted RBP4.8□□□□□ -1.64
UBE4A-201ENST00000252108 ASAP1Q9ULH1 1129 aa4.8□□□□□ -1.64
UBE4A-201ENST00000252108 MROH7-TTC4A0A0A0MT08 1334 aa4.8□□□□□ -1.64
UBE4A-201ENST00000252108 PNPLA7Q6ZV29 1317 aa4.8□□□□□ -1.64
UBE4A-201ENST00000252108 ROBO3Q96MS0 1386 aa4.8□□□□□ -1.64
UBE4A-201ENST00000252108 A0A087WZG4 1122 aa4.8□□□□□ -1.64
UBE4A-201ENST00000252108 SETQ01105 290 aaPredicted RBP4.8□□□□□ -1.64
UBE4A-201ENST00000252108 TRDNQ13061 729 aa4.8□□□□□ -1.64
UBE4A-201ENST00000252108 DHX32Q7L7V1 743 aaKnown RBP4.8□□□□□ -1.64
UBE4A-201ENST00000252108 SYNE4Q8N205 404 aa4.8□□□□□ -1.64
UBE4A-201ENST00000252108 RAPGEF4Q8WZA2 1011 aa4.8□□□□□ -1.64
UBE4A-201ENST00000252108 TTC12Q9H892 705 aaPredicted RBP4.8□□□□□ -1.64
UBE4A-201ENST00000252108 BCL2L12Q9HB09 334 aa4.8□□□□□ -1.64
UBE4A-201ENST00000252108 A0A1B0GUL7 405 aa4.79□□□□□ -1.64
UBE4A-201ENST00000252108 KIF28PB7ZC32 967 aa4.79□□□□□ -1.64
UBE4A-201ENST00000252108 U2AF2P26368 475 aaKnown RBP eCLIP4.79□□□□□ -1.645e-9■□□□□ 9.3
UBE4A-201ENST00000252108 SAFBQ15424 915 aaKnown RBP eCLIP4.79□□□□□ -1.64
UBE4A-201ENST00000252108 TSR1Q2NL82 804 aaKnown RBP4.79□□□□□ -1.64
UBE4A-201ENST00000252108 TAF7LQ5H9L4 462 aa4.79□□□□□ -1.64
UBE4A-201ENST00000252108 APTXQ7Z2E3 356 aaKnown RBP4.79□□□□□ -1.64
UBE4A-201ENST00000252108 CCDC186Q7Z3E2 898 aa4.79□□□□□ -1.64
UBE4A-201ENST00000252108 KCNG4Q8TDN1 519 aa4.79□□□□□ -1.64
UBE4A-201ENST00000252108 ANAPC4Q9UJX5 808 aa4.79□□□□□ -1.64
UBE4A-201ENST00000252108 PAPPA2Q9BXP8 1791 aa4.79□□□□□ -1.64
UBE4A-201ENST00000252108 A0A1W2PQ27 194 aa4.79□□□□□ -1.64
UBE4A-201ENST00000252108 A0A1W2PQ64 194 aa4.79□□□□□ -1.64
UBE4A-201ENST00000252108 A0A1W2PQD8 194 aa4.79□□□□□ -1.64
UBE4A-201ENST00000252108 RIOK3O14730 519 aaKnown RBP4.79□□□□□ -1.64
UBE4A-201ENST00000252108 RNF113AO15541 343 aaKnown RBP4.79□□□□□ -1.64
UBE4A-201ENST00000252108 GIMAP6Q6P9H5 292 aa4.79□□□□□ -1.64
UBE4A-201ENST00000252108 TMX1Q9H3N1 280 aa4.79□□□□□ -1.64
UBE4A-201ENST00000252108 RTEL1Q9NZ71 1219 aa4.79□□□□□ -1.64
UBE4A-201ENST00000252108 TUBE1Q9UJT0 475 aa4.79□□□□□ -1.64
UBE4A-201ENST00000252108 PARP14Q460N5 1801 aa4.79□□□□□ -1.64
UBE4A-201ENST00000252108 RANBP6O60518 1105 aaKnown RBP4.79□□□□□ -1.64
UBE4A-201ENST00000252108 FILIP1LQ4L180 1135 aa4.79□□□□□ -1.64
UBE4A-201ENST00000252108 BARGINQ6ZT62 677 aa4.79□□□□□ -1.64
UBE4A-201ENST00000252108 TBC1D10CQ8IV04 446 aa4.79□□□□□ -1.64
UBE4A-201ENST00000252108 WASF1Q92558 559 aa4.79□□□□□ -1.64
UBE4A-201ENST00000252108 LARP6Q9BRS8 491 aaKnown RBP4.79□□□□□ -1.64
UBE4A-201ENST00000252108 STK36Q9NRP7 1315 aa4.79□□□□□ -1.64
UBE4A-201ENST00000252108 FER1L6Q2WGJ9 1857 aa4.79□□□□□ -1.64
UBE4A-201ENST00000252108 DTNBO60941 627 aa4.79□□□□□ -1.64
UBE4A-201ENST00000252108 SMC2O95347 1197 aa4.79□□□□□ -1.64
UBE4A-201ENST00000252108 USP8P40818 1118 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms