RNA–Protein interactions for RNA: ENST00000250448.2

FOXA1-201, Transcript of forkhead box A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXA1, Length 2,862 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-201ENST00000250448 DDX11Q96FC9 970 aa19.8■□□□□ 0.76
FOXA1-201ENST00000250448 ADRA2BP18089 450 aa19.8■□□□□ 0.76
FOXA1-201ENST00000250448 U3KPZ7 1027 aaPredicted RBP19.8■□□□□ 0.76
FOXA1-201ENST00000250448 RTL9Q8NET4 1388 aa19.8■□□□□ 0.76
FOXA1-201ENST00000250448 COL24A1Q17RW2 1714 aa19.8■□□□□ 0.76
FOXA1-201ENST00000250448 BCAMP50895 628 aa19.79■□□□□ 0.76
FOXA1-201ENST00000250448 IQCB1Q15051 598 aa19.79■□□□□ 0.76
FOXA1-201ENST00000250448 SARM1Q6SZW1 724 aa19.79■□□□□ 0.76
FOXA1-201ENST00000250448 CARMIL3Q8ND23 1372 aa19.79■□□□□ 0.76
FOXA1-201ENST00000250448 GOLGA6L19H0YKK7 550 aa19.79■□□□□ 0.76
FOXA1-201ENST00000250448 TPD52L1Q16890 204 aaPredicted RBP19.79■□□□□ 0.76
FOXA1-201ENST00000250448 PAXBP1Q9Y5B6 917 aa19.79■□□□□ 0.76
FOXA1-201ENST00000250448 C11orf57Q6ZUT1 292 aaPredicted RBP19.78■□□□□ 0.76
FOXA1-201ENST00000250448 RGL2O15211 777 aa19.78■□□□□ 0.76
FOXA1-201ENST00000250448 SLC5A1P13866 664 aa19.78■□□□□ 0.76
FOXA1-201ENST00000250448 STX1AQ16623 288 aa19.78■□□□□ 0.76
FOXA1-201ENST00000250448 PRR5LQ6MZQ0 368 aa19.78■□□□□ 0.76
FOXA1-201ENST00000250448 SMARCC2Q8TAQ2 1214 aa19.78■□□□□ 0.76
FOXA1-201ENST00000250448 TNRC6CQ9HCJ0 1690 aaKnown RBP19.78■□□□□ 0.76
FOXA1-201ENST00000250448 CCDC112Q8NEF3 446 aa19.77■□□□□ 0.76
FOXA1-201ENST00000250448 FEZ1Q99689 392 aa19.77■□□□□ 0.76
FOXA1-201ENST00000250448 PLSCR1O15162 318 aa19.77■□□□□ 0.76
FOXA1-201ENST00000250448 CTAGE5O15320 804 aa19.77■□□□□ 0.76
FOXA1-201ENST00000250448 DDR1Q08345 913 aa19.77■□□□□ 0.76
FOXA1-201ENST00000250448 SCRN1Q12765 414 aa19.77■□□□□ 0.76
FOXA1-201ENST00000250448 FBXO41Q8TF61 875 aa19.77■□□□□ 0.76
FOXA1-201ENST00000250448 MRFAP1L1Q96HT8 127 aa19.77■□□□□ 0.76
FOXA1-201ENST00000250448 MINPP1Q9UNW1 487 aa19.77■□□□□ 0.76
FOXA1-201ENST00000250448 LAMA4Q16363 1823 aa19.77■□□□□ 0.76
FOXA1-201ENST00000250448 SERPINB2P05120 415 aa19.77■□□□□ 0.75
FOXA1-201ENST00000250448 CYP21A2P08686 494 aa19.77■□□□□ 0.75
FOXA1-201ENST00000250448 RPS8P62241 208 aaKnown RBP19.77■□□□□ 0.75
FOXA1-201ENST00000250448 COL23A1Q86Y22 540 aaPredicted RBP19.77■□□□□ 0.75
FOXA1-201ENST00000250448 LLPHQ9BRT6 129 aaKnown RBP19.77■□□□□ 0.75
FOXA1-201ENST00000250448 TM4SF1P30408 202 aa19.76■□□□□ 0.75
FOXA1-201ENST00000250448 CEBPZQ03701 1054 aaKnown RBP19.76■□□□□ 0.75
FOXA1-201ENST00000250448 ADD1P35611 737 aaKnown RBP19.76■□□□□ 0.75
FOXA1-201ENST00000250448 MCMDC2Q4G0Z9 681 aa19.76■□□□□ 0.75
FOXA1-201ENST00000250448 NAA16Q6N069 864 aaPredicted RBP19.76■□□□□ 0.75
FOXA1-201ENST00000250448 CCAR1Q8IX12 1150 aaKnown RBP19.76■□□□□ 0.75
FOXA1-201ENST00000250448 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.76■□□□□ 0.75
FOXA1-201ENST00000250448 PIH1D3Q9NQM4 214 aaKnown RBP19.76■□□□□ 0.75
FOXA1-201ENST00000250448 BSDC1Q9NW68 430 aaPredicted RBP19.76■□□□□ 0.75
FOXA1-201ENST00000250448 AKAP11Q9UKA4 1901 aa19.76■□□□□ 0.75
FOXA1-201ENST00000250448 NEMFO60524 1076 aa19.75■□□□□ 0.75
FOXA1-201ENST00000250448 PFKFB2O60825 505 aa19.75■□□□□ 0.75
FOXA1-201ENST00000250448 KLRK1P26718 216 aa19.75■□□□□ 0.75
FOXA1-201ENST00000250448 GYG1P46976 350 aa19.75■□□□□ 0.75
FOXA1-201ENST00000250448 WASHC4Q2M389 1173 aa19.75■□□□□ 0.75
FOXA1-201ENST00000250448 LRRC8AQ8IWT6 810 aa19.75■□□□□ 0.75
FOXA1-201ENST00000250448 LRRC2Q9BYS8 371 aa19.75■□□□□ 0.75
FOXA1-201ENST00000250448 MYO5AQ9Y4I1 1855 aaKnown RBP19.75■□□□□ 0.75
FOXA1-201ENST00000250448 M0R2C6 588 aa19.75■□□□□ 0.75
FOXA1-201ENST00000250448 RNF113AO15541 343 aaKnown RBP19.75■□□□□ 0.75
FOXA1-201ENST00000250448 RASGRF1Q13972 1273 aa19.75■□□□□ 0.75
FOXA1-201ENST00000250448 MSL1Q68DK7 614 aa19.75■□□□□ 0.75
FOXA1-201ENST00000250448 IPO4Q8TEX9 1081 aaKnown RBP19.75■□□□□ 0.75
FOXA1-201ENST00000250448 OSBP2Q969R2 916 aa19.75■□□□□ 0.75
FOXA1-201ENST00000250448 RCOR1Q9UKL0 485 aa19.75■□□□□ 0.75
FOXA1-201ENST00000250448 IDH1O75874 414 aaKnown RBP19.74■□□□□ 0.75
FOXA1-201ENST00000250448 EN1Q05925 392 aaPredicted RBP19.74■□□□□ 0.75
FOXA1-201ENST00000250448 CEP135Q66GS9 1140 aa19.74■□□□□ 0.75
FOXA1-201ENST00000250448 NSUN7Q8NE18 718 aaKnown RBP19.74■□□□□ 0.75
FOXA1-201ENST00000250448 AKT1S1Q96B36 256 aa19.74■□□□□ 0.75
FOXA1-201ENST00000250448 GOLPH3LQ9H4A5 285 aa19.74■□□□□ 0.75
FOXA1-201ENST00000250448 FOSBP53539 338 aa19.74■□□□□ 0.75
FOXA1-201ENST00000250448 CCDC73Q6ZRK6 1079 aa19.74■□□□□ 0.75
FOXA1-201ENST00000250448 MAST3O60307 1309 aa19.74■□□□□ 0.75
FOXA1-201ENST00000250448 ZMYM1Q5SVZ6 1142 aa19.73■□□□□ 0.75
FOXA1-201ENST00000250448 STOX1Q6ZVD7 989 aa19.73■□□□□ 0.75
FOXA1-201ENST00000250448 FTOQ9C0B1 505 aaKnown RBP eCLIP19.73■□□□□ 0.75
FOXA1-201ENST00000250448 CGNQ9P2M7 1197 aaKnown RBP19.73■□□□□ 0.75
FOXA1-201ENST00000250448 ZFP91Q96JP5 570 aaPredicted RBP19.73■□□□□ 0.75
FOXA1-201ENST00000250448 OGFRQ9NZT2 677 aa19.73■□□□□ 0.75
FOXA1-201ENST00000250448 CTNNA3Q9UI47 895 aa19.73■□□□□ 0.75
FOXA1-201ENST00000250448 A0A0G2JLW4 131 aa19.73■□□□□ 0.75
FOXA1-201ENST00000250448 ARID4AP29374 1257 aaPredicted RBP19.73■□□□□ 0.75
FOXA1-201ENST00000250448 ARID5BQ14865 1188 aa19.73■□□□□ 0.75
FOXA1-201ENST00000250448 EZH2Q15910 746 aaKnown RBP19.73■□□□□ 0.75
FOXA1-201ENST00000250448 PTPDC1A2A3K4 754 aa19.72■□□□□ 0.75
FOXA1-201ENST00000250448 BECN2A8MW95 431 aa19.72■□□□□ 0.75
FOXA1-201ENST00000250448 KINO60870 393 aaKnown RBP19.72■□□□□ 0.75
FOXA1-201ENST00000250448 SPATA5Q8NB90 893 aa19.72■□□□□ 0.75
FOXA1-201ENST00000250448 PUS7LQ9H0K6 701 aaKnown RBP19.72■□□□□ 0.75
FOXA1-201ENST00000250448 POLRMTO00411 1230 aaKnown RBP19.71■□□□□ 0.75
FOXA1-201ENST00000250448 CTDNEP1O95476 244 aa19.71■□□□□ 0.75
FOXA1-201ENST00000250448 HMGB1P09429 215 aaKnown RBP19.71■□□□□ 0.75
FOXA1-201ENST00000250448 NAA30Q147X3 362 aaPredicted RBP19.71■□□□□ 0.75
FOXA1-201ENST00000250448 ZNF592Q92610 1267 aa19.71■□□□□ 0.75
FOXA1-201ENST00000250448 USP28Q96RU2 1077 aa19.71■□□□□ 0.75
FOXA1-201ENST00000250448 USP27XA6NNY8 438 aa19.71■□□□□ 0.75
FOXA1-201ENST00000250448 SNW1Q13573 536 aaKnown RBP19.71■□□□□ 0.75
FOXA1-201ENST00000250448 SLC9C2Q5TAH2 1124 aa19.71■□□□□ 0.75
FOXA1-201ENST00000250448 DHX32Q7L7V1 743 aaKnown RBP19.71■□□□□ 0.75
FOXA1-201ENST00000250448 ZNF396Q96N95 335 aaPredicted RBP19.71■□□□□ 0.75
FOXA1-201ENST00000250448 ANO10Q9NW15 660 aa19.71■□□□□ 0.75
FOXA1-201ENST00000250448 WWC3Q9ULE0 1092 aa19.71■□□□□ 0.75
FOXA1-201ENST00000250448 KIF20AO95235 890 aa19.7■□□□□ 0.74
FOXA1-201ENST00000250448 DHX40Q8IX18 779 aaKnown RBP19.7■□□□□ 0.74
FOXA1-201ENST00000250448 UQCRFS1P1P0C7P4 283 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms