RNA–Protein interactions for RNA: ENST00000249806.10

CLN6-201, Transcript of CLN6, transmembrane ER protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN6, Length 2,243 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-201ENST00000249806 RPS6KA4O75676 772 aa25.32■■□□□ 1.64
CLN6-201ENST00000249806 PTMAP06454 111 aaKnown RBP25.32■■□□□ 1.64
CLN6-201ENST00000249806 TDO2P48775 406 aa25.32■■□□□ 1.64
CLN6-201ENST00000249806 SLC10A5Q5PT55 438 aa25.32■■□□□ 1.64
CLN6-201ENST00000249806 AIFM3Q96NN9 605 aa25.32■■□□□ 1.64
CLN6-201ENST00000249806 MYL10Q9BUA6 226 aa25.32■■□□□ 1.64
CLN6-201ENST00000249806 ZKSCAN5Q9Y2L8 839 aa25.32■■□□□ 1.64
CLN6-201ENST00000249806 PNPLA7Q6ZV29 1317 aa25.32■■□□□ 1.64
CLN6-201ENST00000249806 CHD4Q14839 1912 aa25.31■■□□□ 1.64
CLN6-201ENST00000249806 AP5Z1O43299 807 aa25.31■■□□□ 1.64
CLN6-201ENST00000249806 CYP7A1P22680 504 aa25.31■■□□□ 1.64
CLN6-201ENST00000249806 UBE4AQ14139 1066 aa25.31■■□□□ 1.64
CLN6-201ENST00000249806 TMEM67Q5HYA8 995 aa25.31■■□□□ 1.64
CLN6-201ENST00000249806 AKNAD1Q5T1N1 836 aa25.31■■□□□ 1.64
CLN6-201ENST00000249806 SETDB2Q96T68 719 aa25.31■■□□□ 1.64
CLN6-201ENST00000249806 GOLPH3LQ9H4A5 285 aa25.31■■□□□ 1.64
CLN6-201ENST00000249806 ZBTB4Q9P1Z0 1013 aaPredicted RBP25.31■■□□□ 1.64
CLN6-201ENST00000249806 NFXL1Q6ZNB6 911 aa25.31■■□□□ 1.64
CLN6-201ENST00000249806 TAOK2Q9UL54 1235 aa25.31■■□□□ 1.64
CLN6-201ENST00000249806 GNAT2P19087 354 aa25.3■■□□□ 1.64
CLN6-201ENST00000249806 RC3H1Q5TC82 1133 aaKnown RBP25.3■■□□□ 1.64
CLN6-201ENST00000249806 MFSD6Q6ZSS7 791 aa25.3■■□□□ 1.64
CLN6-201ENST00000249806 NACAP1Q9BZK3 213 aa25.3■■□□□ 1.64
CLN6-201ENST00000249806 RAI14Q9P0K7 980 aa25.3■■□□□ 1.64
CLN6-201ENST00000249806 ME1P48163 572 aa25.29■■□□□ 1.64
CLN6-201ENST00000249806 RRP12Q5JTH9 1297 aaKnown RBP25.29■■□□□ 1.64
CLN6-201ENST00000249806 PHKBQ93100 1093 aa25.29■■□□□ 1.64
CLN6-201ENST00000249806 FAM84BQ96KN1 310 aaPredicted RBP25.29■■□□□ 1.64
CLN6-201ENST00000249806 CCNL1Q9UK58 526 aaPredicted RBP25.29■■□□□ 1.64
CLN6-201ENST00000249806 BTAF1O14981 1849 aa25.29■■□□□ 1.64
CLN6-201ENST00000249806 A0A1B0GUL6 1792 aa25.29■■□□□ 1.64
CLN6-201ENST00000249806 IFIT3O14879 490 aaKnown RBP25.29■■□□□ 1.64
CLN6-201ENST00000249806 ZBTB43O43298 467 aa25.29■■□□□ 1.64
CLN6-201ENST00000249806 ZPR1O75312 459 aa25.29■■□□□ 1.64
CLN6-201ENST00000249806 NBPF5PQ86XG9 351 aaPredicted RBP25.29■■□□□ 1.64
CLN6-201ENST00000249806 VPS37DQ86XT2 251 aa25.29■■□□□ 1.64
CLN6-201ENST00000249806 SDR42E1Q8WUS8 393 aa25.29■■□□□ 1.64
CLN6-201ENST00000249806 TOMM22Q9NS69 142 aa25.29■■□□□ 1.64
CLN6-201ENST00000249806 GNL3LQ9NVN8 582 aaKnown RBP25.29■■□□□ 1.64
CLN6-201ENST00000249806 COL1A1P02452 1464 aaPredicted RBP25.29■■□□□ 1.64
CLN6-201ENST00000249806 KIF28PB7ZC32 967 aa25.28■■□□□ 1.64
CLN6-201ENST00000249806 ANO6Q4KMQ2 910 aa25.28■■□□□ 1.64
CLN6-201ENST00000249806 CAVIN4Q5BKX8 364 aa25.28■■□□□ 1.64
CLN6-201ENST00000249806 FAM200AQ8TCP9 573 aa25.28■■□□□ 1.64
CLN6-201ENST00000249806 ZKSCAN3Q9BRR0 538 aa25.28■■□□□ 1.64
CLN6-201ENST00000249806 CLIC4Q9Y696 253 aa25.28■■□□□ 1.64
CLN6-201ENST00000249806 KLRK1P26718 216 aa25.28■■□□□ 1.64
CLN6-201ENST00000249806 SGMS1Q86VZ5 419 aa25.28■■□□□ 1.64
CLN6-201ENST00000249806 NLRP3Q96P20 1036 aa25.28■■□□□ 1.64
CLN6-201ENST00000249806 FAM217BQ9NTX9 383 aaPredicted RBP25.28■■□□□ 1.64
CLN6-201ENST00000249806 RTEL1Q9NZ71 1219 aa25.28■■□□□ 1.64
CLN6-201ENST00000249806 SCN7AQ01118 1682 aa25.27■■□□□ 1.64
CLN6-201ENST00000249806 RPS8P62241 208 aaKnown RBP25.27■■□□□ 1.64
CLN6-201ENST00000249806 SNW1Q13573 536 aaKnown RBP25.27■■□□□ 1.64
CLN6-201ENST00000249806 LUZP1Q86V48 1076 aa25.27■■□□□ 1.64
CLN6-201ENST00000249806 CNNM2Q9H8M5 875 aa25.27■■□□□ 1.64
CLN6-201ENST00000249806 PCDHA7Q9UN72 937 aa25.27■■□□□ 1.64
CLN6-201ENST00000249806 ALG1Q9BT22 464 aa25.27■■□□□ 1.64
CLN6-201ENST00000249806 KRT23Q9C075 422 aa25.27■■□□□ 1.64
CLN6-201ENST00000249806 NYXQ9GZU5 481 aa25.27■■□□□ 1.64
CLN6-201ENST00000249806 LIFRP42702 1097 aa25.26■■□□□ 1.63
CLN6-201ENST00000249806 NTRK3Q16288 839 aa25.26■■□□□ 1.63
CLN6-201ENST00000249806 STAG1Q8WVM7 1258 aa25.26■■□□□ 1.63
CLN6-201ENST00000249806 ARHGEF1Q92888 912 aaKnown RBP25.26■■□□□ 1.63
CLN6-201ENST00000249806 RTCBQ9Y3I0 505 aaKnown RBP25.26■■□□□ 1.63
CLN6-201ENST00000249806 SMIM22K7EJ46 135 aa25.25■■□□□ 1.63
CLN6-201ENST00000249806 KIF23Q02241 960 aaPredicted RBP25.25■■□□□ 1.63
CLN6-201ENST00000249806 MYSM1Q5VVJ2 828 aa25.25■■□□□ 1.63
CLN6-201ENST00000249806 SASS6Q6UVJ0 657 aa25.25■■□□□ 1.63
CLN6-201ENST00000249806 LINC00301Q8NCQ3 95 aa25.25■■□□□ 1.63
CLN6-201ENST00000249806 SLC12A7Q9Y666 1083 aa25.25■■□□□ 1.63
CLN6-201ENST00000249806 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP25.25■■□□□ 1.63
CLN6-201ENST00000249806 MAGEB6P1A0A0J9YX57 407 aa25.25■■□□□ 1.63
CLN6-201ENST00000249806 GOLGA8AA7E2F4 631 aa25.25■■□□□ 1.63
CLN6-201ENST00000249806 UBE2Q2LH0YL09 131 aa25.25■■□□□ 1.63
CLN6-201ENST00000249806 RGL2O15211 777 aa25.25■■□□□ 1.63
CLN6-201ENST00000249806 CBX8Q9HC52 389 aa25.25■■□□□ 1.63
CLN6-201ENST00000249806 RANBP6O60518 1105 aaKnown RBP25.24■■□□□ 1.63
CLN6-201ENST00000249806 CDKL5O76039 1030 aa25.24■■□□□ 1.63
CLN6-201ENST00000249806 FSIP1Q8NA03 581 aa25.24■■□□□ 1.63
CLN6-201ENST00000249806 ENGASEQ8NFI3 743 aa25.24■■□□□ 1.63
CLN6-201ENST00000249806 ZNF830Q96NB3 372 aaPredicted RBP25.24■■□□□ 1.63
CLN6-201ENST00000249806 CCDC69A6NI79 296 aa25.24■■□□□ 1.63
CLN6-201ENST00000249806 MINDY4BA8MYZ0 360 aa25.24■■□□□ 1.63
CLN6-201ENST00000249806 ZNF500O60304 480 aaPredicted RBP25.24■■□□□ 1.63
CLN6-201ENST00000249806 TPTE2Q6XPS3 522 aa25.24■■□□□ 1.63
CLN6-201ENST00000249806 CCDC73Q6ZRK6 1079 aa25.24■■□□□ 1.63
CLN6-201ENST00000249806 BRAPQ7Z569 592 aa25.24■■□□□ 1.63
CLN6-201ENST00000249806 ZNF384Q8TF68 577 aa25.24■■□□□ 1.63
CLN6-201ENST00000249806 NAP1L5Q96NT1 182 aaPredicted RBP25.24■■□□□ 1.63
CLN6-201ENST00000249806 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP25.24■■□□□ 1.63
CLN6-201ENST00000249806 DYNLL1P63167 89 aaKnown RBP25.23■■□□□ 1.63
CLN6-201ENST00000249806 PPARAQ07869 468 aa25.23■■□□□ 1.63
CLN6-201ENST00000249806 STK38Q15208 465 aa25.23■■□□□ 1.63
CLN6-201ENST00000249806 CPLX2Q6PUV4 134 aaKnown RBP25.23■■□□□ 1.63
CLN6-201ENST00000249806 RIOK1Q9BRS2 568 aaKnown RBP25.23■■□□□ 1.63
CLN6-201ENST00000249806 TIAM2Q8IVF5 1701 aa25.23■■□□□ 1.63
CLN6-201ENST00000249806 IARSP41252 1262 aaKnown RBP25.22■■□□□ 1.63
CLN6-201ENST00000249806 FBXO33Q7Z6M2 555 aa25.22■■□□□ 1.63
CLN6-201ENST00000249806 DNAJC25Q9H1X3 360 aa25.22■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms