RNA–Protein interactions for RNA: ENST00000249299.6

LSM8-201, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-201ENST00000249299 RIOK1Q9BRS2 568 aaKnown RBP15.47■□□□□ 0.07
LSM8-201ENST00000249299 NOL10Q9BSC4 688 aaKnown RBP15.47■□□□□ 0.07
LSM8-201ENST00000249299 SERPINA10Q9UK55 444 aa15.47■□□□□ 0.07
LSM8-201ENST00000249299 MROH7-TTC4A0A0A0MT08 1334 aa15.47■□□□□ 0.07
LSM8-201ENST00000249299 FZD9O00144 591 aa15.46■□□□□ 0.07
LSM8-201ENST00000249299 ZKSCAN1P17029 563 aaPredicted RBP15.46■□□□□ 0.07
LSM8-201ENST00000249299 RPS12P25398 132 aaKnown RBP15.46■□□□□ 0.07
LSM8-201ENST00000249299 PTH1RQ03431 593 aa15.46■□□□□ 0.07
LSM8-201ENST00000249299 RSBN1LQ6PCB5 846 aaPredicted RBP15.46■□□□□ 0.07
LSM8-201ENST00000249299 CERS5Q8N5B7 392 aa15.46■□□□□ 0.07
LSM8-201ENST00000249299 NACAP1Q9BZK3 213 aa15.46■□□□□ 0.07
LSM8-201ENST00000249299 RBM19Q9Y4C8 960 aaKnown RBP15.46■□□□□ 0.07
LSM8-201ENST00000249299 GRIN3BO60391 1043 aa15.45■□□□□ 0.06
LSM8-201ENST00000249299 MBD4O95243 580 aa15.45■□□□□ 0.06
LSM8-201ENST00000249299 CHGBP05060 677 aa15.45■□□□□ 0.06
LSM8-201ENST00000249299 ARHGAP27Q6ZUM4 889 aa15.45■□□□□ 0.06
LSM8-201ENST00000249299 GMLQ99445 158 aa15.45■□□□□ 0.06
LSM8-201ENST00000249299 CRNKL1Q9BZJ0 848 aaKnown RBP15.45■□□□□ 0.06
LSM8-201ENST00000249299 ATP8A2Q9NTI2 1148 aa15.45■□□□□ 0.06
LSM8-201ENST00000249299 TTF2Q9UNY4 1162 aaKnown RBP15.45■□□□□ 0.06
LSM8-201ENST00000249299 RBM8AQ9Y5S9 174 aaKnown RBP15.45■□□□□ 0.06
LSM8-201ENST00000249299 MYH13Q9UKX3 1938 aa15.45■□□□□ 0.06
LSM8-201ENST00000249299 MAST2Q6P0Q8 1798 aa15.45■□□□□ 0.06
LSM8-201ENST00000249299 NT5C2P49902 561 aa15.44■□□□□ 0.06
LSM8-201ENST00000249299 CXCL9Q07325 125 aa15.44■□□□□ 0.06
LSM8-201ENST00000249299 KRT32Q14532 448 aa15.44■□□□□ 0.06
LSM8-201ENST00000249299 CIAPIN1Q6FI81 312 aa15.44■□□□□ 0.06
LSM8-201ENST00000249299 CCDC129Q6ZRS4 1044 aa15.44■□□□□ 0.06
LSM8-201ENST00000249299 ADGRA1Q86SQ6 560 aa15.44■□□□□ 0.06
LSM8-201ENST00000249299 SPOCK2Q92563 424 aa15.44■□□□□ 0.06
LSM8-201ENST00000249299 TEKT1Q969V4 418 aa15.44■□□□□ 0.06
LSM8-201ENST00000249299 ZDHHC15Q96MV8 337 aa15.44■□□□□ 0.06
LSM8-201ENST00000249299 HDAC9Q9UKV0 1011 aa15.44■□□□□ 0.06
LSM8-201ENST00000249299 JAG2Q9Y219 1238 aa15.44■□□□□ 0.06
LSM8-201ENST00000249299 MYH7P12883 1935 aa15.44■□□□□ 0.06
LSM8-201ENST00000249299 ZC3H4Q9UPT8 1303 aaKnown RBP15.44■□□□□ 0.06
LSM8-201ENST00000249299 PSMD14O00487 310 aa15.43■□□□□ 0.06
LSM8-201ENST00000249299 EIF6P56537 245 aaKnown RBP15.43■□□□□ 0.06
LSM8-201ENST00000249299 GRIK5Q16478 980 aa15.43■□□□□ 0.06
LSM8-201ENST00000249299 SLFNL1Q499Z3 407 aa15.43■□□□□ 0.06
LSM8-201ENST00000249299 OGFOD1Q8N543 542 aa15.43■□□□□ 0.06
LSM8-201ENST00000249299 DPF2Q92785 391 aa15.43■□□□□ 0.06
LSM8-201ENST00000249299 FBXW7Q969H0 707 aa15.43■□□□□ 0.06
LSM8-201ENST00000249299 DDRGK1Q96HY6 314 aa15.43■□□□□ 0.06
LSM8-201ENST00000249299 TM6SF1Q9BZW5 370 aa15.43■□□□□ 0.06
LSM8-201ENST00000249299 KCNQ5Q9NR82 932 aa15.43■□□□□ 0.06
LSM8-201ENST00000249299 TAOK2Q9UL54 1235 aa15.43■□□□□ 0.06
LSM8-201ENST00000249299 GSG1L2A8MUP6 293 aa15.43■□□□□ 0.06
LSM8-201ENST00000249299 FGAP02671 866 aa15.43■□□□□ 0.06
LSM8-201ENST00000249299 RABEP1Q15276 862 aa15.43■□□□□ 0.06
LSM8-201ENST00000249299 IMMTQ16891 758 aaKnown RBP15.43■□□□□ 0.06
LSM8-201ENST00000249299 VPS53Q5VIR6 699 aa15.43■□□□□ 0.06
LSM8-201ENST00000249299 CREB3L3Q68CJ9 461 aa15.43■□□□□ 0.06
LSM8-201ENST00000249299 LCORLQ8N3X6 602 aa15.43■□□□□ 0.06
LSM8-201ENST00000249299 MTMR14Q8NCE2 650 aa15.43■□□□□ 0.06
LSM8-201ENST00000249299 ARMT1Q9H993 441 aa15.43■□□□□ 0.06
LSM8-201ENST00000249299 DAGLAQ9Y4D2 1042 aa15.43■□□□□ 0.06
LSM8-201ENST00000249299 SLC4A4Q9Y6R1 1079 aa15.43■□□□□ 0.06
LSM8-201ENST00000249299 SLC27A2O14975 620 aa15.42■□□□□ 0.06
LSM8-201ENST00000249299 FOXP2O15409 715 aa15.42■□□□□ 0.06
LSM8-201ENST00000249299 PCP11498 1178 aaKnown RBP15.42■□□□□ 0.06
LSM8-201ENST00000249299 YBX3P16989 372 aaKnown RBP eCLIP15.42■□□□□ 0.065e-8■□□□□ 8.5
LSM8-201ENST00000249299 PSMA5P28066 241 aa15.42■□□□□ 0.06
LSM8-201ENST00000249299 ANP32AP39687 249 aaKnown RBP15.42■□□□□ 0.06
LSM8-201ENST00000249299 RASSF7Q02833 373 aa15.42■□□□□ 0.06
LSM8-201ENST00000249299 DIXDC1Q155Q3 683 aa15.42■□□□□ 0.06
LSM8-201ENST00000249299 IFNL3Q8IZI9 196 aa15.42■□□□□ 0.06
LSM8-201ENST00000249299 MIGA1Q8NAN2 632 aa15.42■□□□□ 0.06
LSM8-201ENST00000249299 KIF2CQ99661 725 aa15.42■□□□□ 0.06
LSM8-201ENST00000249299 AATFQ9NY61 560 aaKnown RBP eCLIP15.42■□□□□ 0.06
LSM8-201ENST00000249299 COL4A5P29400 1685 aa15.41■□□□□ 0.06
LSM8-201ENST00000249299 RAD17O75943 681 aa15.41■□□□□ 0.06
LSM8-201ENST00000249299 HMGB1P09429 215 aaKnown RBP15.41■□□□□ 0.06
LSM8-201ENST00000249299 BTDP43251 543 aa15.41■□□□□ 0.06
LSM8-201ENST00000249299 CRKP46108 304 aa15.41■□□□□ 0.06
LSM8-201ENST00000249299 SBK1Q52WX2 424 aa15.41■□□□□ 0.06
LSM8-201ENST00000249299 KIAA0825Q8IV33 1275 aa15.41■□□□□ 0.06
LSM8-201ENST00000249299 RASEFQ8IZ41 740 aa15.41■□□□□ 0.06
LSM8-201ENST00000249299 NAPBQ9H115 298 aa15.41■□□□□ 0.06
LSM8-201ENST00000249299 CHD4Q14839 1912 aa15.4■□□□□ 0.06
LSM8-201ENST00000249299 CCDC88AQ3V6T2 1871 aa15.4■□□□□ 0.06
LSM8-201ENST00000249299 ZNF213O14771 459 aa15.4■□□□□ 0.06
LSM8-201ENST00000249299 APPP05067 770 aa15.4■□□□□ 0.06
LSM8-201ENST00000249299 USP17L8P0C7I0 530 aa15.4■□□□□ 0.06
LSM8-201ENST00000249299 PRELPP51888 382 aa15.4■□□□□ 0.06
LSM8-201ENST00000249299 RHBDL3P58872 404 aa15.4■□□□□ 0.06
LSM8-201ENST00000249299 ZNF280AP59817 542 aaPredicted RBP15.4■□□□□ 0.06
LSM8-201ENST00000249299 APOBEC3HQ6NTF7 200 aaKnown RBP15.4■□□□□ 0.06
LSM8-201ENST00000249299 MKRN1Q9UHC7 482 aaKnown RBP15.4■□□□□ 0.06
LSM8-201ENST00000249299 ANAPC4Q9UJX5 808 aa15.4■□□□□ 0.06
LSM8-201ENST00000249299 SNX14Q9Y5W7 946 aa15.4■□□□□ 0.06
LSM8-201ENST00000249299 PSME4Q14997 1843 aa15.39■□□□□ 0.06
LSM8-201ENST00000249299 CYP21A2P08686 494 aa15.39■□□□□ 0.05
LSM8-201ENST00000249299 TDO2P48775 406 aa15.39■□□□□ 0.05
LSM8-201ENST00000249299 DYNLL1P63167 89 aaKnown RBP15.39■□□□□ 0.05
LSM8-201ENST00000249299 GPR162Q16538 588 aa15.39■□□□□ 0.05
LSM8-201ENST00000249299 FKBP1CQ5VVH2 108 aa15.39■□□□□ 0.05
LSM8-201ENST00000249299 GPC2Q8N158 579 aa15.39■□□□□ 0.05
LSM8-201ENST00000249299 MXD3Q9BW11 206 aa15.39■□□□□ 0.05
LSM8-201ENST00000249299 DCP1AQ9NPI6 582 aaPredicted RBP15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms