RNA–Protein interactions for RNA: ENST00000249007.4

RFPL3-201, Transcript of ret finger protein like 3, humanhuman

TSL 1 (best) BASIC

Gene RFPL3, Length 1,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL3-201ENST00000249007 BCRP11274 1271 aa15.32■□□□□ 0.04
RFPL3-201ENST00000249007 SYN1P17600 705 aa15.32■□□□□ 0.04
RFPL3-201ENST00000249007 CRKP46108 304 aa15.32■□□□□ 0.04
RFPL3-201ENST00000249007 PXYLP1Q8TE99 480 aa15.32■□□□□ 0.04
RFPL3-201ENST00000249007 HOOK2Q96ED9 719 aa15.32■□□□□ 0.04
RFPL3-201ENST00000249007 PLA2G12BQ9BX93 195 aa15.32■□□□□ 0.04
RFPL3-201ENST00000249007 UBE2OQ9C0C9 1292 aaKnown RBP15.32■□□□□ 0.04
RFPL3-201ENST00000249007 CACNB3P54284 484 aa15.31■□□□□ 0.04
RFPL3-201ENST00000249007 ANKRD18BA2A2Z9 1011 aa15.3■□□□□ 0.04
RFPL3-201ENST00000249007 CSF1RP07333 972 aa15.3■□□□□ 0.04
RFPL3-201ENST00000249007 CYP2C8P10632 490 aa15.3■□□□□ 0.04
RFPL3-201ENST00000249007 DCAF15Q66K64 600 aa15.3■□□□□ 0.04
RFPL3-201ENST00000249007 GUCD1Q96NT3 240 aa15.3■□□□□ 0.04
RFPL3-201ENST00000249007 KCNH4Q9UQ05 1017 aa15.3■□□□□ 0.04
RFPL3-201ENST00000249007 A0A1B0GUL6 1792 aa15.29■□□□□ 0.04
RFPL3-201ENST00000249007 CCDC30Q5VVM6 783 aa15.29■□□□□ 0.04
RFPL3-201ENST00000249007 ANKLE1Q8NAG6 615 aa15.29■□□□□ 0.04
RFPL3-201ENST00000249007 TNPO2O14787 897 aaKnown RBP15.28■□□□□ 0.04
RFPL3-201ENST00000249007 INPP5BP32019 993 aa15.28■□□□□ 0.04
RFPL3-201ENST00000249007 IRF5Q13568 498 aa15.28■□□□□ 0.04
RFPL3-201ENST00000249007 MOGSQ13724 837 aa15.28■□□□□ 0.04
RFPL3-201ENST00000249007 DNAH12Q6ZR08 3092 aa15.28■□□□□ 0.04
RFPL3-201ENST00000249007 CHMP4AQ9BY43 222 aa15.28■□□□□ 0.04
RFPL3-201ENST00000249007 ZNF341Q9BYN7 854 aa15.28■□□□□ 0.04
RFPL3-201ENST00000249007 NBPF3Q9H094 633 aa15.28■□□□□ 0.04
RFPL3-201ENST00000249007 TMOD2Q9NZR1 351 aa15.28■□□□□ 0.04
RFPL3-201ENST00000249007 TAOK2Q9UL54 1235 aa15.28■□□□□ 0.04
RFPL3-201ENST00000249007 GCKRQ14397 625 aa15.27■□□□□ 0.04
RFPL3-201ENST00000249007 FAM109BQ6ICB4 259 aaPredicted RBP15.27■□□□□ 0.04
RFPL3-201ENST00000249007 MIGA2Q7L4E1 593 aa15.27■□□□□ 0.04
RFPL3-201ENST00000249007 FAM83AQ86UY5 434 aa15.27■□□□□ 0.04
RFPL3-201ENST00000249007 TDRD7Q8NHU6 1098 aaKnown RBP15.27■□□□□ 0.04
RFPL3-201ENST00000249007 RUNDC1Q96C34 613 aa15.27■□□□□ 0.04
RFPL3-201ENST00000249007 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.27■□□□□ 0.04
RFPL3-201ENST00000249007 NCOR1O75376 2440 aa15.27■□□□□ 0.03
RFPL3-201ENST00000249007 POTEB2H3BUK9 544 aa15.27■□□□□ 0.03
RFPL3-201ENST00000249007 ZNF853P0CG23 659 aa15.27■□□□□ 0.03
RFPL3-201ENST00000249007 IFIT5Q13325 482 aaKnown RBP15.27■□□□□ 0.03
RFPL3-201ENST00000249007 C8orf58Q8NAV2 365 aa15.27■□□□□ 0.03
RFPL3-201ENST00000249007 FAM161BQ96MY7 647 aa15.27■□□□□ 0.03
RFPL3-201ENST00000249007 DOCK3Q8IZD9 2030 aa15.26■□□□□ 0.03
RFPL3-201ENST00000249007 PLIN1O60240 522 aa15.26■□□□□ 0.03
RFPL3-201ENST00000249007 CASP7P55210 303 aa15.26■□□□□ 0.03
RFPL3-201ENST00000249007 FKBP1CQ5VVH2 108 aa15.26■□□□□ 0.03
RFPL3-201ENST00000249007 TEKT1Q969V4 418 aa15.26■□□□□ 0.03
RFPL3-201ENST00000249007 IFT57Q9NWB7 429 aa15.26■□□□□ 0.03
RFPL3-201ENST00000249007 RPAP1Q9BWH6 1393 aaPredicted RBP15.25■□□□□ 0.03
RFPL3-201ENST00000249007 HIBADHP31937 336 aaKnown RBP15.25■□□□□ 0.03
RFPL3-201ENST00000249007 GYG1P46976 350 aa15.25■□□□□ 0.03
RFPL3-201ENST00000249007 HDLBPQ00341 1268 aaKnown RBP15.25■□□□□ 0.03
RFPL3-201ENST00000249007 GPAT2Q6NUI2 795 aa15.25■□□□□ 0.03
RFPL3-201ENST00000249007 C11orf49Q9H6J7 331 aa15.25■□□□□ 0.03
RFPL3-201ENST00000249007 CHMP3Q9Y3E7 222 aa15.25■□□□□ 0.03
RFPL3-201ENST00000249007 COL9A1P20849 921 aa15.24■□□□□ 0.03
RFPL3-201ENST00000249007 GNAI1P63096 354 aa15.24■□□□□ 0.03
RFPL3-201ENST00000249007 GRIK5Q16478 980 aa15.24■□□□□ 0.03
RFPL3-201ENST00000249007 MYH16Q9H6N6 1097 aa15.24■□□□□ 0.03
RFPL3-201ENST00000249007 SMCR8Q8TEV9 937 aaPredicted RBP15.23■□□□□ 0.03
RFPL3-201ENST00000249007 COA7Q96BR5 231 aa15.23■□□□□ 0.03
RFPL3-201ENST00000249007 ZDHHC15Q96MV8 337 aa15.23■□□□□ 0.03
RFPL3-201ENST00000249007 DDX60LQ5H9U9 1706 aaKnown RBP15.23■□□□□ 0.03
RFPL3-201ENST00000249007 CXCL11O14625 94 aa15.22■□□□□ 0.03
RFPL3-201ENST00000249007 LDHAL6AQ6ZMR3 332 aa15.22■□□□□ 0.03
RFPL3-201ENST00000249007 MAFAQ8NHW3 353 aaPredicted RBP15.22■□□□□ 0.03
RFPL3-201ENST00000249007 FAM84BQ96KN1 310 aaPredicted RBP15.22■□□□□ 0.03
RFPL3-201ENST00000249007 STK31Q9BXU1 1019 aa15.22■□□□□ 0.03
RFPL3-201ENST00000249007 CNNM1Q9NRU3 951 aa15.22■□□□□ 0.03
RFPL3-201ENST00000249007 ZNF112Q9UJU3 913 aa15.22■□□□□ 0.03
RFPL3-201ENST00000249007 HMGCRP04035 888 aa15.21■□□□□ 0.03
RFPL3-201ENST00000249007 MDM2Q00987 491 aaPredicted RBP15.21■□□□□ 0.03
RFPL3-201ENST00000249007 TAF7LQ5H9L4 462 aa15.21■□□□□ 0.03
RFPL3-201ENST00000249007 NOL9Q5SY16 702 aaKnown RBP15.21■□□□□ 0.03
RFPL3-201ENST00000249007 ZNF697Q5TEC3 545 aa15.21■□□□□ 0.03
RFPL3-201ENST00000249007 APOBEC3HQ6NTF7 200 aaKnown RBP15.21■□□□□ 0.03
RFPL3-201ENST00000249007 FASTKD5Q7L8L6 764 aaKnown RBP15.21■□□□□ 0.03
RFPL3-201ENST00000249007 COL2A1P02458 1487 aaPredicted RBP15.21■□□□□ 0.02
RFPL3-201ENST00000249007 CALD1Q05682 793 aaKnown RBP15.2■□□□□ 0.02
RFPL3-201ENST00000249007 CHAF1AQ13111 956 aaPredicted RBP15.2■□□□□ 0.02
RFPL3-201ENST00000249007 UBE4AQ14139 1066 aa15.2■□□□□ 0.02
RFPL3-201ENST00000249007 TBC1D22AQ8WUA7 517 aa15.2■□□□□ 0.02
RFPL3-201ENST00000249007 SYMPKQ92797 1274 aaKnown RBP15.2■□□□□ 0.02
RFPL3-201ENST00000249007 ZNF594Q96JF6 807 aaPredicted RBP15.2■□□□□ 0.02
RFPL3-201ENST00000249007 HMX1Q9NP08 348 aaPredicted RBP15.2■□□□□ 0.02
RFPL3-201ENST00000249007 IQSEC3Q9UPP2 1182 aaPredicted RBP15.2■□□□□ 0.02
RFPL3-201ENST00000249007 AK9Q5TCS8 1911 aa15.2■□□□□ 0.02
RFPL3-201ENST00000249007 BDP1A6H8Y1 2624 aa15.2■□□□□ 0.02
RFPL3-201ENST00000249007 PFASO15067 1338 aa15.2■□□□□ 0.02
RFPL3-201ENST00000249007 A0A0G2JLL6 359 aaPredicted RBP15.2■□□□□ 0.02
RFPL3-201ENST00000249007 FOXO4P98177 505 aa15.2■□□□□ 0.02
RFPL3-201ENST00000249007 WDR43Q15061 677 aaKnown RBP eCLIP15.2■□□□□ 0.02
RFPL3-201ENST00000249007 CCDC57Q2TAC2 916 aa15.2■□□□□ 0.02
RFPL3-201ENST00000249007 PRRT2Q7Z6L0 340 aaPredicted RBP15.2■□□□□ 0.02
RFPL3-201ENST00000249007 VPS37DQ86XT2 251 aa15.2■□□□□ 0.02
RFPL3-201ENST00000249007 TSPYL6Q8N831 410 aa15.2■□□□□ 0.02
RFPL3-201ENST00000249007 CDX2Q99626 313 aaPredicted RBP15.2■□□□□ 0.02
RFPL3-201ENST00000249007 SLC45A1Q9Y2W3 748 aa15.2■□□□□ 0.02
RFPL3-201ENST00000249007 FRAT2O75474 233 aaPredicted RBP15.19■□□□□ 0.02
RFPL3-201ENST00000249007 GADL1Q6ZQY3 521 aa15.19■□□□□ 0.02
RFPL3-201ENST00000249007 G2E3Q7L622 706 aa15.19■□□□□ 0.02
RFPL3-201ENST00000249007 LINS1Q8NG48 757 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms