RNA–Protein interactions for RNA: ENST00000241393.3

CXCR4-201, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CXCR4, Length 1,682 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-201ENST00000241393 TNNT2P45379 298 aaPredicted RBP9.99□□□□□ -0.81
CXCR4-201ENST00000241393 HDGFL2Q7Z4V5 671 aaPredicted RBP9.99□□□□□ -0.81
CXCR4-201ENST00000241393 POGKQ9P215 609 aa9.99□□□□□ -0.81
CXCR4-201ENST00000241393 USP35Q9P2H5 1018 aa9.99□□□□□ -0.81
CXCR4-201ENST00000241393 CDC42BPGQ6DT37 1551 aa9.98□□□□□ -0.81
CXCR4-201ENST00000241393 A2ML1A8K2U0 1454 aa9.98□□□□□ -0.81
CXCR4-201ENST00000241393 ATP7BP35670 1465 aa9.98□□□□□ -0.81
CXCR4-201ENST00000241393 U2AF1L5P0DN76 240 aaPredicted RBP9.98□□□□□ -0.81
CXCR4-201ENST00000241393 CD33P20138 364 aa9.98□□□□□ -0.81
CXCR4-201ENST00000241393 VAMP1P23763 118 aa9.98□□□□□ -0.81
CXCR4-201ENST00000241393 CANXP27824 592 aaKnown RBP9.98□□□□□ -0.81
CXCR4-201ENST00000241393 U2AF1Q01081 240 aaKnown RBP eCLIP9.98□□□□□ -0.81
CXCR4-201ENST00000241393 PSMD2Q13200 908 aa9.98□□□□□ -0.81
CXCR4-201ENST00000241393 ORC1Q13415 861 aa9.98□□□□□ -0.81
CXCR4-201ENST00000241393 SLC16A10Q8TF71 515 aa9.98□□□□□ -0.81
CXCR4-201ENST00000241393 MRRFQ96E11 262 aaKnown RBP9.98□□□□□ -0.81
CXCR4-201ENST00000241393 PRAM1Q96QH2 718 aa9.98□□□□□ -0.81
CXCR4-201ENST00000241393 AVENQ9NQS1 362 aaPredicted RBP9.98□□□□□ -0.81
CXCR4-201ENST00000241393 TMEM63CQ9P1W3 806 aa9.98□□□□□ -0.81
CXCR4-201ENST00000241393 PPM1GO15355 546 aaPredicted RBP9.97□□□□□ -0.81
CXCR4-201ENST00000241393 BMP4P12644 408 aa9.97□□□□□ -0.81
CXCR4-201ENST00000241393 NFKB1P19838 968 aa9.97□□□□□ -0.81
CXCR4-201ENST00000241393 SOX18P35713 384 aa9.97□□□□□ -0.81
CXCR4-201ENST00000241393 PLAURQ03405 335 aa9.97□□□□□ -0.81
CXCR4-201ENST00000241393 KRT25Q7Z3Z0 450 aa9.97□□□□□ -0.81
CXCR4-201ENST00000241393 PMFBP1Q8TBY8 1022 aa9.97□□□□□ -0.81
CXCR4-201ENST00000241393 BHMTQ93088 406 aa9.97□□□□□ -0.81
CXCR4-201ENST00000241393 FOXD3Q9UJU5 478 aaPredicted RBP9.97□□□□□ -0.81
CXCR4-201ENST00000241393 FYB1O15117 783 aa9.96□□□□□ -0.81
CXCR4-201ENST00000241393 GRNP28799 593 aaKnown RBP9.96□□□□□ -0.81
CXCR4-201ENST00000241393 HYAL2Q12891 473 aa9.96□□□□□ -0.81
CXCR4-201ENST00000241393 OR13H1Q8NG92 308 aa9.96□□□□□ -0.81
CXCR4-201ENST00000241393 PLEKHF1Q96S99 279 aa9.96□□□□□ -0.81
CXCR4-201ENST00000241393 DUSP9Q99956 384 aaKnown RBP9.96□□□□□ -0.81
CXCR4-201ENST00000241393 TLR7Q9NYK1 1049 aaKnown RBP9.96□□□□□ -0.81
CXCR4-201ENST00000241393 STK26Q9P289 416 aa9.96□□□□□ -0.81
CXCR4-201ENST00000241393 RIMS2Q9UQ26 1411 aa9.96□□□□□ -0.82
CXCR4-201ENST00000241393 MX2P20592 715 aa9.96□□□□□ -0.82
CXCR4-201ENST00000241393 GNA15P30679 374 aa9.96□□□□□ -0.82
CXCR4-201ENST00000241393 MAP2K3P46734 347 aa9.96□□□□□ -0.82
CXCR4-201ENST00000241393 CCDC74AQ96AQ1 378 aa9.96□□□□□ -0.82
CXCR4-201ENST00000241393 SPACA7Q96KW9 195 aa9.96□□□□□ -0.82
CXCR4-201ENST00000241393 STRN4Q9NRL3 753 aa9.96□□□□□ -0.82
CXCR4-201ENST00000241393 PARP2Q9UGN5 583 aa9.96□□□□□ -0.82
CXCR4-201ENST00000241393 RRP7AQ9Y3A4 280 aaKnown RBP9.96□□□□□ -0.82
CXCR4-201ENST00000241393 KIF20BQ96Q89 1820 aa9.96□□□□□ -0.82
CXCR4-201ENST00000241393 SETD1AO15047 1707 aaKnown RBP9.95□□□□□ -0.82
CXCR4-201ENST00000241393 SORBS3O60504 671 aa9.95□□□□□ -0.82
CXCR4-201ENST00000241393 TARSP26639 723 aaKnown RBP9.95□□□□□ -0.82
CXCR4-201ENST00000241393 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.95□□□□□ -0.82
CXCR4-201ENST00000241393 CDK19Q9BWU1 502 aa9.95□□□□□ -0.82
CXCR4-201ENST00000241393 RBSNQ9H1K0 784 aa9.95□□□□□ -0.82
CXCR4-201ENST00000241393 TMPOP42166 694 aaKnown RBP9.94□□□□□ -0.82
CXCR4-201ENST00000241393 SAFB2Q14151 953 aaKnown RBP eCLIP9.94□□□□□ -0.82
CXCR4-201ENST00000241393 TMC4Q7Z404 712 aa9.94□□□□□ -0.82
CXCR4-201ENST00000241393 GALNT12Q8IXK2 581 aa9.94□□□□□ -0.82
CXCR4-201ENST00000241393 ZNF428Q96B54 188 aa9.94□□□□□ -0.82
CXCR4-201ENST00000241393 SRCIN1Q9C0H9 1055 aa9.94□□□□□ -0.82
CXCR4-201ENST00000241393 VIRMAQ69YN4 1812 aaKnown RBP9.94□□□□□ -0.82
CXCR4-201ENST00000241393 TSPOAP1O95153 1857 aa9.94□□□□□ -0.82
CXCR4-201ENST00000241393 MMP20O60882 483 aa9.93□□□□□ -0.82
CXCR4-201ENST00000241393 IGHDP01880 384 aa9.93□□□□□ -0.82
CXCR4-201ENST00000241393 HOXD8P13378 290 aaPredicted RBP9.93□□□□□ -0.82
CXCR4-201ENST00000241393 NRLP54845 237 aa9.93□□□□□ -0.82
CXCR4-201ENST00000241393 DAB2P98082 770 aa9.93□□□□□ -0.82
CXCR4-201ENST00000241393 C1orf127Q8N9H9 656 aa9.93□□□□□ -0.82
CXCR4-201ENST00000241393 PANK1Q8TE04 598 aa9.93□□□□□ -0.82
CXCR4-201ENST00000241393 FAM135BQ49AJ0 1406 aa9.93□□□□□ -0.82
CXCR4-201ENST00000241393 DIAPH1O60610 1272 aaKnown RBP9.93□□□□□ -0.82
CXCR4-201ENST00000241393 GADD45BO75293 160 aaPredicted RBP9.93□□□□□ -0.82
CXCR4-201ENST00000241393 ZKSCAN2Q63HK3 967 aa9.93□□□□□ -0.82
CXCR4-201ENST00000241393 ZNF787Q6DD87 383 aa9.93□□□□□ -0.82
CXCR4-201ENST00000241393 DHX32Q7L7V1 743 aaKnown RBP9.93□□□□□ -0.82
CXCR4-201ENST00000241393 SKAP1Q86WV1 359 aa9.93□□□□□ -0.82
CXCR4-201ENST00000241393 VTI1BQ9UEU0 232 aa9.93□□□□□ -0.82
CXCR4-201ENST00000241393 KNDC1Q76NI1 1749 aa9.92□□□□□ -0.82
CXCR4-201ENST00000241393 TECPR2O15040 1411 aa9.92□□□□□ -0.82
CXCR4-201ENST00000241393 H3BM21 787 aa9.92□□□□□ -0.82
CXCR4-201ENST00000241393 GPR25O00155 361 aa9.92□□□□□ -0.82
CXCR4-201ENST00000241393 SIN3BO75182 1162 aa9.92□□□□□ -0.82
CXCR4-201ENST00000241393 EIF4BP23588 611 aaKnown RBP9.92□□□□□ -0.82
CXCR4-201ENST00000241393 DEKP35659 375 aaKnown RBP9.92□□□□□ -0.82
CXCR4-201ENST00000241393 MVPQ14764 893 aaKnown RBP9.92□□□□□ -0.82
CXCR4-201ENST00000241393 ZNF468Q5VIY5 522 aaPredicted RBP9.92□□□□□ -0.82
CXCR4-201ENST00000241393 NCAPG2Q86XI2 1143 aa9.92□□□□□ -0.82
CXCR4-201ENST00000241393 FRAT1Q92837 279 aaPredicted RBP9.92□□□□□ -0.82
CXCR4-201ENST00000241393 SLC30A3Q99726 388 aa9.92□□□□□ -0.82
CXCR4-201ENST00000241393 RWDD1Q9H446 243 aaPredicted RBP9.92□□□□□ -0.82
CXCR4-201ENST00000241393 MBIPQ9NS73 344 aa9.92□□□□□ -0.82
CXCR4-201ENST00000241393 CNTN3Q9P232 1028 aa9.92□□□□□ -0.82
CXCR4-201ENST00000241393 WWC3Q9ULE0 1092 aa9.92□□□□□ -0.82
CXCR4-201ENST00000241393 KIF13AQ9H1H9 1805 aa9.92□□□□□ -0.82
CXCR4-201ENST00000241393 EDC4Q6P2E9 1401 aaKnown RBP9.92□□□□□ -0.82
CXCR4-201ENST00000241393 U2SURPO15042 1029 aaKnown RBP9.91□□□□□ -0.82
CXCR4-201ENST00000241393 RGS3P49796 1198 aa9.91□□□□□ -0.82
CXCR4-201ENST00000241393 AATKQ6ZMQ8 1374 aa9.91□□□□□ -0.82
CXCR4-201ENST00000241393 CPSF1Q10570 1443 aaKnown RBP9.91□□□□□ -0.82
CXCR4-201ENST00000241393 PPIP5K1Q6PFW1 1433 aa9.91□□□□□ -0.82
CXCR4-201ENST00000241393 UNCXA6NJT0 531 aa9.9□□□□□ -0.82
CXCR4-201ENST00000241393 EREGO14944 169 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms