RNA–Protein interactions for RNA: ENST00000239243.6

MSX2-201, Transcript of msh homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX2, Length 2,241 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX2-201ENST00000239243 XDHP47989 1333 aa27.28■■□□□ 1.96
MSX2-201ENST00000239243 SYCE3A1L190 88 aa27.28■■□□□ 1.96
MSX2-201ENST00000239243 CPLX1O14810 134 aa27.28■■□□□ 1.96
MSX2-201ENST00000239243 TXNRD1Q16881 649 aa27.28■■□□□ 1.96
MSX2-201ENST00000239243 CRY2Q49AN0 593 aa27.28■■□□□ 1.96
MSX2-201ENST00000239243 ANKIB1Q9P2G1 1089 aa27.28■■□□□ 1.96
MSX2-201ENST00000239243 LETM1O95202 739 aaPredicted RBP27.27■■□□□ 1.96
MSX2-201ENST00000239243 ADGRA1Q86SQ6 560 aa27.27■■□□□ 1.96
MSX2-201ENST00000239243 RIOK1Q9BRS2 568 aaKnown RBP27.27■■□□□ 1.96
MSX2-201ENST00000239243 MTA3Q9BTC8 594 aa27.27■■□□□ 1.96
MSX2-201ENST00000239243 TFCP2L1Q9NZI6 479 aa27.27■■□□□ 1.96
MSX2-201ENST00000239243 MAST2Q6P0Q8 1798 aa27.27■■□□□ 1.96
MSX2-201ENST00000239243 CCDC183Q5T5S1 534 aa27.26■■□□□ 1.96
MSX2-201ENST00000239243 IRS2Q9Y4H2 1338 aa27.26■■□□□ 1.95
MSX2-201ENST00000239243 CTDSPL2Q05D32 466 aa27.26■■□□□ 1.95
MSX2-201ENST00000239243 PANK2Q9BZ23 570 aa27.26■■□□□ 1.95
MSX2-201ENST00000239243 LIFRP42702 1097 aa27.25■■□□□ 1.95
MSX2-201ENST00000239243 SGMS1Q86VZ5 419 aa27.25■■□□□ 1.95
MSX2-201ENST00000239243 RGS22Q8NE09 1264 aa27.25■■□□□ 1.95
MSX2-201ENST00000239243 CFAP45Q9UL16 551 aa27.25■■□□□ 1.95
MSX2-201ENST00000239243 SPTY2D1Q68D10 685 aaPredicted RBP27.25■■□□□ 1.95
MSX2-201ENST00000239243 IGDCC4Q8TDY8 1250 aa27.25■■□□□ 1.95
MSX2-201ENST00000239243 NSUN4Q96CB9 384 aaKnown RBP27.25■■□□□ 1.95
MSX2-201ENST00000239243 RBM17Q96I25 401 aaKnown RBP27.25■■□□□ 1.95
MSX2-201ENST00000239243 ANAPC4Q9UJX5 808 aa27.25■■□□□ 1.95
MSX2-201ENST00000239243 CDKL5O76039 1030 aa27.24■■□□□ 1.95
MSX2-201ENST00000239243 NASPP49321 788 aaPredicted RBP27.24■■□□□ 1.95
MSX2-201ENST00000239243 SART3Q15020 963 aaKnown RBP27.24■■□□□ 1.95
MSX2-201ENST00000239243 GIMAP6Q6P9H5 292 aa27.24■■□□□ 1.95
MSX2-201ENST00000239243 CPLX2Q6PUV4 134 aaKnown RBP27.24■■□□□ 1.95
MSX2-201ENST00000239243 TTC6Q86TZ1 520 aa27.24■■□□□ 1.95
MSX2-201ENST00000239243 SPATA32Q96LK8 384 aa27.24■■□□□ 1.95
MSX2-201ENST00000239243 BRIP1Q9BX63 1249 aa27.24■■□□□ 1.95
MSX2-201ENST00000239243 PPARAQ07869 468 aa27.24■■□□□ 1.95
MSX2-201ENST00000239243 TMEM67Q5HYA8 995 aa27.24■■□□□ 1.95
MSX2-201ENST00000239243 ATL3Q6DD88 541 aa27.24■■□□□ 1.95
MSX2-201ENST00000239243 KDM4AO75164 1064 aa27.23■■□□□ 1.95
MSX2-201ENST00000239243 METAP2P50579 478 aaKnown RBP eCLIP27.23■■□□□ 1.95
MSX2-201ENST00000239243 FAM173BQ6P4H8 233 aa27.23■■□□□ 1.95
MSX2-201ENST00000239243 APOA5Q6Q788 366 aa27.23■■□□□ 1.95
MSX2-201ENST00000239243 C15orf52Q6ZUT6 534 aaKnown RBP27.23■■□□□ 1.95
MSX2-201ENST00000239243 ANP32BQ92688 251 aaKnown RBP27.23■■□□□ 1.95
MSX2-201ENST00000239243 ZSWIM5Q9P217 1185 aa27.23■■□□□ 1.95
MSX2-201ENST00000239243 CCDC88AQ3V6T2 1871 aa27.22■■□□□ 1.95
MSX2-201ENST00000239243 PLSCR1O15162 318 aa27.22■■□□□ 1.95
MSX2-201ENST00000239243 FDPSP14324 419 aaKnown RBP27.22■■□□□ 1.95
MSX2-201ENST00000239243 MECOMQ03112 1051 aa27.22■■□□□ 1.95
MSX2-201ENST00000239243 NFXL1Q6ZNB6 911 aa27.22■■□□□ 1.95
MSX2-201ENST00000239243 LY9Q9HBG7 655 aa27.22■■□□□ 1.95
MSX2-201ENST00000239243 IFIT3O14879 490 aaKnown RBP27.21■■□□□ 1.95
MSX2-201ENST00000239243 CHAF1AQ13111 956 aaPredicted RBP27.21■■□□□ 1.95
MSX2-201ENST00000239243 ZNF804AQ7Z570 1209 aa27.21■■□□□ 1.95
MSX2-201ENST00000239243 SDR42E1Q8WUS8 393 aa27.21■■□□□ 1.95
MSX2-201ENST00000239243 ZBTB43O43298 467 aa27.21■■□□□ 1.95
MSX2-201ENST00000239243 PROM2Q8N271 834 aa27.21■■□□□ 1.95
MSX2-201ENST00000239243 WDR66Q8TBY9 1149 aa27.21■■□□□ 1.95
MSX2-201ENST00000239243 ORC3Q9UBD5 711 aaPredicted RBP27.21■■□□□ 1.95
MSX2-201ENST00000239243 ERICH2A1L162 156 aa27.2■■□□□ 1.95
MSX2-201ENST00000239243 GOLGA6L4A6NEF3 574 aa27.2■■□□□ 1.95
MSX2-201ENST00000239243 PCP11498 1178 aaKnown RBP27.2■■□□□ 1.95
MSX2-201ENST00000239243 TXNRD3Q86VQ6 643 aa27.2■■□□□ 1.95
MSX2-201ENST00000239243 LEO1Q8WVC0 666 aaPredicted RBP27.2■■□□□ 1.95
MSX2-201ENST00000239243 TOMM22Q9NS69 142 aa27.2■■□□□ 1.95
MSX2-201ENST00000239243 MYH15Q9Y2K3 1946 aa27.2■■□□□ 1.95
MSX2-201ENST00000239243 CCDC69A6NI79 296 aa27.2■■□□□ 1.94
MSX2-201ENST00000239243 POLRMTO00411 1230 aaKnown RBP27.2■■□□□ 1.94
MSX2-201ENST00000239243 BBOX1O75936 387 aa27.2■■□□□ 1.94
MSX2-201ENST00000239243 SYNE3Q6ZMZ3 975 aa27.2■■□□□ 1.94
MSX2-201ENST00000239243 TMTC2Q8N394 836 aa27.2■■□□□ 1.94
MSX2-201ENST00000239243 ZNF384Q8TF68 577 aa27.2■■□□□ 1.94
MSX2-201ENST00000239243 C8orf76Q96K31 380 aa27.19■■□□□ 1.94
MSX2-201ENST00000239243 ZNF396Q96N95 335 aaPredicted RBP27.19■■□□□ 1.94
MSX2-201ENST00000239243 TFIP11Q9UBB9 837 aaKnown RBP27.19■■□□□ 1.94
MSX2-201ENST00000239243 SLC12A7Q9Y666 1083 aa27.19■■□□□ 1.94
MSX2-201ENST00000239243 KIAA1551Q9HCM1 1747 aa27.19■■□□□ 1.94
MSX2-201ENST00000239243 HOXA10P31260 410 aaPredicted RBP27.18■■□□□ 1.94
MSX2-201ENST00000239243 DYNLL1P63167 89 aaKnown RBP27.18■■□□□ 1.94
MSX2-201ENST00000239243 NKX2-3Q8TAU0 364 aa27.18■■□□□ 1.94
MSX2-201ENST00000239243 CRNKL1Q9BZJ0 848 aaKnown RBP27.18■■□□□ 1.94
MSX2-201ENST00000239243 TSPY26PQ9H489 355 aa27.18■■□□□ 1.94
MSX2-201ENST00000239243 ATP2B4P23634 1241 aa27.18■■□□□ 1.94
MSX2-201ENST00000239243 DDR1Q08345 913 aa27.18■■□□□ 1.94
MSX2-201ENST00000239243 RRP12Q5JTH9 1297 aaKnown RBP27.18■■□□□ 1.94
MSX2-201ENST00000239243 TDRD7Q8NHU6 1098 aaKnown RBP27.18■■□□□ 1.94
MSX2-201ENST00000239243 ESR2Q92731 530 aa27.18■■□□□ 1.94
MSX2-201ENST00000239243 INCENPQ9NQS7 918 aa27.18■■□□□ 1.94
MSX2-201ENST00000239243 NID2Q14112 1375 aa27.17■■□□□ 1.94
MSX2-201ENST00000239243 MINDY4BA8MYZ0 360 aa27.17■■□□□ 1.94
MSX2-201ENST00000239243 TMC4Q7Z404 712 aa27.17■■□□□ 1.94
MSX2-201ENST00000239243 CRAMP1Q96RY5 1269 aa27.17■■□□□ 1.94
MSX2-201ENST00000239243 RBSNQ9H1K0 784 aa27.17■■□□□ 1.94
MSX2-201ENST00000239243 TACC3Q9Y6A5 838 aa27.17■■□□□ 1.94
MSX2-201ENST00000239243 PRDX5P30044 214 aa27.17■■□□□ 1.94
MSX2-201ENST00000239243 MICU3Q86XE3 530 aa27.17■■□□□ 1.94
MSX2-201ENST00000239243 DZIP1Q86YF9 867 aaKnown RBP27.17■■□□□ 1.94
MSX2-201ENST00000239243 DUOX1Q9NRD9 1551 aa27.17■■□□□ 1.94
MSX2-201ENST00000239243 KLRG2A4D1S0 409 aaPredicted RBP27.16■■□□□ 1.94
MSX2-201ENST00000239243 GOLGA8AA7E2F4 631 aa27.16■■□□□ 1.94
MSX2-201ENST00000239243 FOSBP53539 338 aa27.16■■□□□ 1.94
MSX2-201ENST00000239243 RCAN1P53805 252 aa27.16■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms