RNA–Protein interactions for RNA: ENST00000238628.10

IFT43-201, Transcript of intraflagellar transport 43, humanhuman

TSL 1 (best) BASIC

Gene IFT43, Length 816 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-201ENST00000238628 TNFAIP1Q13829 316 aa10.65□□□□□ -0.7
IFT43-201ENST00000238628 ERO1BQ86YB8 467 aa10.65□□□□□ -0.7
IFT43-201ENST00000238628 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.65□□□□□ -0.7
IFT43-201ENST00000238628 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.65□□□□□ -0.7
IFT43-201ENST00000238628 HCN4Q9Y3Q4 1203 aa10.65□□□□□ -0.7
IFT43-201ENST00000238628 ARIH1Q9Y4X5 557 aaPredicted RBP10.65□□□□□ -0.7
IFT43-201ENST00000238628 ECM29Q5VYK3 1845 aa10.64□□□□□ -0.71
IFT43-201ENST00000238628 NEURL1BA8MQ27 555 aa10.64□□□□□ -0.71
IFT43-201ENST00000238628 ITGA6P23229 1130 aa10.64□□□□□ -0.71
IFT43-201ENST00000238628 UBE3BQ7Z3V4 1068 aa10.64□□□□□ -0.71
IFT43-201ENST00000238628 TSPYL6Q8N831 410 aa10.64□□□□□ -0.71
IFT43-201ENST00000238628 LBHD1Q9BQE6 289 aaPredicted RBP10.64□□□□□ -0.71
IFT43-201ENST00000238628 C1QTNF1Q9BXJ1 281 aa10.64□□□□□ -0.71
IFT43-201ENST00000238628 STK31Q9BXU1 1019 aa10.64□□□□□ -0.71
IFT43-201ENST00000238628 CD209Q9NNX6 404 aa10.64□□□□□ -0.71
IFT43-201ENST00000238628 PRUNE2Q8WUY3 3088 aa10.63□□□□□ -0.71
IFT43-201ENST00000238628 CHRNDQ07001 517 aa10.63□□□□□ -0.71
IFT43-201ENST00000238628 ANKRD23Q86SG2 305 aa10.63□□□□□ -0.71
IFT43-201ENST00000238628 ALYREFQ86V81 257 aaKnown RBP10.63□□□□□ -0.71
IFT43-201ENST00000238628 CDAN1Q8IWY9 1227 aa10.63□□□□□ -0.71
IFT43-201ENST00000238628 PLA2G12BQ9BX93 195 aa10.63□□□□□ -0.71
IFT43-201ENST00000238628 COL2A1P02458 1487 aaPredicted RBP10.62□□□□□ -0.71
IFT43-201ENST00000238628 AOX1Q06278 1338 aa10.62□□□□□ -0.71
IFT43-201ENST00000238628 NCOR1O75376 2440 aa10.62□□□□□ -0.71
IFT43-201ENST00000238628 TAF5LO75529 589 aa10.62□□□□□ -0.71
IFT43-201ENST00000238628 SLC4A2P04920 1241 aa10.62□□□□□ -0.71
IFT43-201ENST00000238628 CSF1RP07333 972 aa10.62□□□□□ -0.71
IFT43-201ENST00000238628 PPIL2Q13356 520 aa10.62□□□□□ -0.71
IFT43-201ENST00000238628 IRF5Q13568 498 aa10.62□□□□□ -0.71
IFT43-201ENST00000238628 G2E3Q7L622 706 aa10.62□□□□□ -0.71
IFT43-201ENST00000238628 CERS5Q8N5B7 392 aa10.62□□□□□ -0.71
IFT43-201ENST00000238628 ADAMTS19Q8TE59 1207 aa10.62□□□□□ -0.71
IFT43-201ENST00000238628 TTYH1Q9H313 450 aaPredicted RBP10.62□□□□□ -0.71
IFT43-201ENST00000238628 SNCAIPQ9Y6H5 919 aa10.62□□□□□ -0.71
IFT43-201ENST00000238628 PIEZO1Q92508 2521 aa10.61□□□□□ -0.71
IFT43-201ENST00000238628 EYSQ5T1H1 3165 aa10.61□□□□□ -0.71
IFT43-201ENST00000238628 ANKRD18BA2A2Z9 1011 aa10.61□□□□□ -0.71
IFT43-201ENST00000238628 SNAP23O00161 211 aa10.61□□□□□ -0.71
IFT43-201ENST00000238628 TNPO2O14787 897 aaKnown RBP10.61□□□□□ -0.71
IFT43-201ENST00000238628 GCKRQ14397 625 aa10.61□□□□□ -0.71
IFT43-201ENST00000238628 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.61□□□□□ -0.71
IFT43-201ENST00000238628 USP38Q8NB14 1042 aa10.61□□□□□ -0.71
IFT43-201ENST00000238628 ZKSCAN4Q969J2 545 aaPredicted RBP10.61□□□□□ -0.71
IFT43-201ENST00000238628 TEPSINQ96N21 525 aa10.61□□□□□ -0.71
IFT43-201ENST00000238628 UHRF1Q96T88 793 aaPredicted RBP10.61□□□□□ -0.71
IFT43-201ENST00000238628 PARK7Q99497 189 aaKnown RBP10.61□□□□□ -0.71
IFT43-201ENST00000238628 SPINK5Q9NQ38 1064 aaPredicted RBP10.61□□□□□ -0.71
IFT43-201ENST00000238628 ZNF70Q9UC06 446 aaPredicted RBP10.61□□□□□ -0.71
IFT43-201ENST00000238628 MUC3AQ02505 3323 aa10.61□□□□□ -0.71
IFT43-201ENST00000238628 TCP10L2B9ZVM9 353 aa10.6□□□□□ -0.71
IFT43-201ENST00000238628 BCRP11274 1271 aa10.6□□□□□ -0.71
IFT43-201ENST00000238628 IL1R1P14778 569 aa10.6□□□□□ -0.71
IFT43-201ENST00000238628 TNNI2P48788 182 aa10.6□□□□□ -0.71
IFT43-201ENST00000238628 FKBP1AP62942 108 aaKnown RBP10.6□□□□□ -0.71
IFT43-201ENST00000238628 TWISTNBQ3B726 338 aaPredicted RBP10.6□□□□□ -0.71
IFT43-201ENST00000238628 C15orf52Q6ZUT6 534 aaKnown RBP10.6□□□□□ -0.71
IFT43-201ENST00000238628 ZNF804AQ7Z570 1209 aa10.6□□□□□ -0.71
IFT43-201ENST00000238628 IL27Q8NEV9 243 aa10.6□□□□□ -0.71
IFT43-201ENST00000238628 ATXN2LQ8WWM7 1075 aaKnown RBP10.6□□□□□ -0.71
IFT43-201ENST00000238628 TSR2Q969E8 191 aaKnown RBP10.6□□□□□ -0.71
IFT43-201ENST00000238628 WRNIP1Q96S55 665 aa10.6□□□□□ -0.71
IFT43-201ENST00000238628 TMEM39BQ9GZU3 492 aa10.6□□□□□ -0.71
IFT43-201ENST00000238628 MYH16Q9H6N6 1097 aa10.6□□□□□ -0.71
IFT43-201ENST00000238628 TDRD3Q9H7E2 651 aaKnown RBP10.6□□□□□ -0.71
IFT43-201ENST00000238628 PFASO15067 1338 aa10.59□□□□□ -0.71
IFT43-201ENST00000238628 CACNA1FO60840 1977 aa10.59□□□□□ -0.71
IFT43-201ENST00000238628 CYP2C8P10632 490 aa10.59□□□□□ -0.71
IFT43-201ENST00000238628 CASP7P55210 303 aa10.59□□□□□ -0.71
IFT43-201ENST00000238628 PPATQ06203 517 aa10.59□□□□□ -0.71
IFT43-201ENST00000238628 IFIT5Q13325 482 aaKnown RBP10.59□□□□□ -0.71
IFT43-201ENST00000238628 SPDYE2Q495Y8 402 aa10.59□□□□□ -0.71
IFT43-201ENST00000238628 ASB2Q96Q27 587 aa10.59□□□□□ -0.71
IFT43-201ENST00000238628 HMX1Q9NP08 348 aaPredicted RBP10.59□□□□□ -0.71
IFT43-201ENST00000238628 JAG2Q9Y219 1238 aa10.59□□□□□ -0.71
IFT43-201ENST00000238628 CHMP3Q9Y3E7 222 aa10.59□□□□□ -0.71
IFT43-201ENST00000238628 MGAMO43451 1857 aa10.59□□□□□ -0.71
IFT43-201ENST00000238628 PLIN1O60240 522 aa10.58□□□□□ -0.72
IFT43-201ENST00000238628 FLIIQ13045 1269 aa10.58□□□□□ -0.72
IFT43-201ENST00000238628 FKBP5Q13451 457 aaPredicted RBP10.58□□□□□ -0.72
IFT43-201ENST00000238628 LRRC26Q2I0M4 334 aa10.58□□□□□ -0.72
IFT43-201ENST00000238628 LINS1Q8NG48 757 aa10.58□□□□□ -0.72
IFT43-201ENST00000238628 DNAAF4Q8WXU2 420 aa10.58□□□□□ -0.72
IFT43-201ENST00000238628 PPM1EQ8WY54 764 aa10.58□□□□□ -0.72
IFT43-201ENST00000238628 COA7Q96BR5 231 aa10.58□□□□□ -0.72
IFT43-201ENST00000238628 PRKRIP1Q9H875 184 aaPredicted RBP10.58□□□□□ -0.72
IFT43-201ENST00000238628 OGDHLQ9ULD0 1010 aa10.58□□□□□ -0.72
IFT43-201ENST00000238628 DDX60LQ5H9U9 1706 aaKnown RBP10.58□□□□□ -0.72
IFT43-201ENST00000238628 SMAD3P84022 425 aaKnown RBP10.57□□□□□ -0.72
IFT43-201ENST00000238628 SHHQ15465 462 aa10.57□□□□□ -0.72
IFT43-201ENST00000238628 LRFN3Q9BTN0 628 aa10.57□□□□□ -0.72
IFT43-201ENST00000238628 PRKAG2Q9UGJ0 569 aa10.57□□□□□ -0.72
IFT43-201ENST00000238628 HMGCRP04035 888 aa10.56□□□□□ -0.72
IFT43-201ENST00000238628 MRPS5P82675 430 aaKnown RBP10.56□□□□□ -0.72
IFT43-201ENST00000238628 FOXO4P98177 505 aa10.56□□□□□ -0.72
IFT43-201ENST00000238628 CCDC57Q2TAC2 916 aa10.56□□□□□ -0.72
IFT43-201ENST00000238628 TAF7LQ5H9L4 462 aa10.56□□□□□ -0.72
IFT43-201ENST00000238628 THEGQ9P2T0 379 aa10.56□□□□□ -0.72
IFT43-201ENST00000238628 TTF2Q9UNY4 1162 aaKnown RBP10.56□□□□□ -0.72
IFT43-201ENST00000238628 A0A1B0GUL6 1792 aa10.56□□□□□ -0.72
IFT43-201ENST00000238628 MFSD14BQ5SR56 506 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms