RNA–Protein interactions for RNA: ENST00000236671.6

CTSD-201, Transcript of cathepsin D, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CTSD, Length 2,123 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-201ENST00000236671 BRAPQ7Z569 592 aa18.05■□□□□ 0.48
CTSD-201ENST00000236671 FBXW7Q969H0 707 aa18.05■□□□□ 0.48
CTSD-201ENST00000236671 BPIFA3Q9BQP9 254 aa18.05■□□□□ 0.48
CTSD-201ENST00000236671 PUS7LQ9H0K6 701 aaKnown RBP18.05■□□□□ 0.48
CTSD-201ENST00000236671 KIAA1468Q9P260 1216 aa18.05■□□□□ 0.48
CTSD-201ENST00000236671 ORC3Q9UBD5 711 aaPredicted RBP18.05■□□□□ 0.48
CTSD-201ENST00000236671 ABCC12Q96J65 1359 aa18.05■□□□□ 0.48
CTSD-201ENST00000236671 SPTLC2O15270 562 aa18.05■□□□□ 0.48
CTSD-201ENST00000236671 SF3A1Q15459 793 aaKnown RBP18.05■□□□□ 0.48
CTSD-201ENST00000236671 HSP90AB3PQ58FF7 597 aa18.05■□□□□ 0.48
CTSD-201ENST00000236671 DNAJC10Q8IXB1 793 aa18.05■□□□□ 0.48
CTSD-201ENST00000236671 C4AP0C0L4 1744 aa18.05■□□□□ 0.48
CTSD-201ENST00000236671 C4BP0C0L5 1744 aa18.05■□□□□ 0.48
CTSD-201ENST00000236671 KIF28PB7ZC32 967 aa18.04■□□□□ 0.48
CTSD-201ENST00000236671 ZAP70P43403 619 aa18.04■□□□□ 0.48
CTSD-201ENST00000236671 BAG6P46379 1132 aa18.04■□□□□ 0.48
CTSD-201ENST00000236671 LINC00116Q8NCU8 138 aa18.04■□□□□ 0.48
CTSD-201ENST00000236671 OSBPL5Q9H0X9 879 aaPredicted RBP18.04■□□□□ 0.48
CTSD-201ENST00000236671 KCND1Q9NSA2 647 aa18.04■□□□□ 0.48
CTSD-201ENST00000236671 GJB4Q9NTQ9 266 aa18.04■□□□□ 0.48
CTSD-201ENST00000236671 RIC1Q4ADV7 1423 aa18.04■□□□□ 0.48
CTSD-201ENST00000236671 WDR19Q8NEZ3 1342 aa18.04■□□□□ 0.48
CTSD-201ENST00000236671 PLSCR1O15162 318 aa18.04■□□□□ 0.48
CTSD-201ENST00000236671 DMTNQ08495 405 aa18.04■□□□□ 0.48
CTSD-201ENST00000236671 RAB11FIP4Q86YS3 637 aa18.04■□□□□ 0.48
CTSD-201ENST00000236671 NCOA7Q8NI08 942 aa18.04■□□□□ 0.48
CTSD-201ENST00000236671 RREB1Q92766 1687 aa18.03■□□□□ 0.48
CTSD-201ENST00000236671 GSDMDP57764 484 aa18.03■□□□□ 0.48
CTSD-201ENST00000236671 KIF23Q02241 960 aaPredicted RBP18.03■□□□□ 0.48
CTSD-201ENST00000236671 TCIRG1Q13488 830 aa18.03■□□□□ 0.48
CTSD-201ENST00000236671 PI16Q6UXB8 463 aa18.03■□□□□ 0.48
CTSD-201ENST00000236671 CCAR2Q8N163 923 aaKnown RBP18.03■□□□□ 0.48
CTSD-201ENST00000236671 COL5A3P25940 1745 aaPredicted RBP18.03■□□□□ 0.48
CTSD-201ENST00000236671 SPDYE4A6NLX3 237 aa18.02■□□□□ 0.48
CTSD-201ENST00000236671 GPAA1O43292 621 aa18.02■□□□□ 0.48
CTSD-201ENST00000236671 NAA30Q147X3 362 aaPredicted RBP18.02■□□□□ 0.48
CTSD-201ENST00000236671 PTPN14Q15678 1187 aa18.02■□□□□ 0.48
CTSD-201ENST00000236671 AXDND1Q5T1B0 1012 aaPredicted RBP18.02■□□□□ 0.48
CTSD-201ENST00000236671 RALYLQ86SE5 291 aaKnown RBP18.02■□□□□ 0.48
CTSD-201ENST00000236671 ZNF592Q92610 1267 aa18.02■□□□□ 0.48
CTSD-201ENST00000236671 MYH7P12883 1935 aa18.02■□□□□ 0.48
CTSD-201ENST00000236671 CPLX1O14810 134 aa18.02■□□□□ 0.47
CTSD-201ENST00000236671 UTP14CQ5TAP6 766 aaKnown RBP18.02■□□□□ 0.47
CTSD-201ENST00000236671 ANO1Q5XXA6 986 aa18.02■□□□□ 0.47
CTSD-201ENST00000236671 CCDC85AQ96PX6 553 aaPredicted RBP18.02■□□□□ 0.47
CTSD-201ENST00000236671 PLA2G12BQ9BX93 195 aa18.02■□□□□ 0.47
CTSD-201ENST00000236671 NBPF3Q9H094 633 aa18.02■□□□□ 0.47
CTSD-201ENST00000236671 IMPACTQ9P2X3 320 aa18.02■□□□□ 0.47
CTSD-201ENST00000236671 MROH7-TTC4A0A0A0MT08 1334 aa18.01■□□□□ 0.47
CTSD-201ENST00000236671 ZNF213O14771 459 aa18.01■□□□□ 0.47
CTSD-201ENST00000236671 CSF1RP07333 972 aa18.01■□□□□ 0.47
CTSD-201ENST00000236671 TRIM28Q13263 835 aaKnown RBP18.01■□□□□ 0.47
CTSD-201ENST00000236671 ZNF827Q17R98 1081 aa18.01■□□□□ 0.47
CTSD-201ENST00000236671 ZNF202O95125 648 aa18.01■□□□□ 0.47
CTSD-201ENST00000236671 PCCAP05165 728 aaPredicted RBP18.01■□□□□ 0.47
CTSD-201ENST00000236671 SLC3A2P08195 630 aaKnown RBP18.01■□□□□ 0.47
CTSD-201ENST00000236671 FEZ1Q99689 392 aa18.01■□□□□ 0.47
CTSD-201ENST00000236671 PDGFDQ9GZP0 370 aaPredicted RBP18.01■□□□□ 0.47
CTSD-201ENST00000236671 RGPD3A6NKT7 1758 aaPredicted RBP18■□□□□ 0.47
CTSD-201ENST00000236671 RGPD4Q7Z3J3 1758 aa18■□□□□ 0.47
CTSD-201ENST00000236671 PFKFB1P16118 471 aa18■□□□□ 0.47
CTSD-201ENST00000236671 CMA1P23946 247 aa18■□□□□ 0.47
CTSD-201ENST00000236671 NLRP12P59046 1061 aa18■□□□□ 0.47
CTSD-201ENST00000236671 ZRSR1Q15695 479 aaKnown RBP18■□□□□ 0.47
CTSD-201ENST00000236671 SYNE3Q6ZMZ3 975 aa18■□□□□ 0.47
CTSD-201ENST00000236671 RGS22Q8NE09 1264 aa18■□□□□ 0.47
CTSD-201ENST00000236671 SMARCC1Q92922 1105 aaPredicted RBP18■□□□□ 0.47
CTSD-201ENST00000236671 FAM89AQ96GI7 184 aa18■□□□□ 0.47
CTSD-201ENST00000236671 XPO4Q9C0E2 1151 aaKnown RBP18■□□□□ 0.47
CTSD-201ENST00000236671 TRMT1Q9NXH9 659 aaKnown RBP18■□□□□ 0.47
CTSD-201ENST00000236671 NCAPHQ15003 741 aa17.99■□□□□ 0.47
CTSD-201ENST00000236671 CGNQ9P2M7 1197 aaKnown RBP17.99■□□□□ 0.47
CTSD-201ENST00000236671 DENND2AQ9ULE3 1009 aa17.99■□□□□ 0.47
CTSD-201ENST00000236671 SOCS7O14512 581 aa17.99■□□□□ 0.47
CTSD-201ENST00000236671 WDHD1O75717 1129 aaPredicted RBP17.99■□□□□ 0.47
CTSD-201ENST00000236671 MCAMP43121 646 aa17.99■□□□□ 0.47
CTSD-201ENST00000236671 IFIT5Q13325 482 aaKnown RBP17.99■□□□□ 0.47
CTSD-201ENST00000236671 TAF7LQ5H9L4 462 aa17.99■□□□□ 0.47
CTSD-201ENST00000236671 NKX2-3Q8TAU0 364 aa17.99■□□□□ 0.47
CTSD-201ENST00000236671 IFNKQ9P0W0 207 aa17.99■□□□□ 0.47
CTSD-201ENST00000236671 ZMYM6O95789 1325 aa17.98■□□□□ 0.47
CTSD-201ENST00000236671 AKAP11Q9UKA4 1901 aa17.98■□□□□ 0.47
CTSD-201ENST00000236671 BIN1O00499 593 aa17.98■□□□□ 0.47
CTSD-201ENST00000236671 ARMCX5Q6P1M9 558 aa17.98■□□□□ 0.47
CTSD-201ENST00000236671 CCDC125Q86Z20 511 aa17.98■□□□□ 0.47
CTSD-201ENST00000236671 TBC1D10CQ8IV04 446 aa17.98■□□□□ 0.47
CTSD-201ENST00000236671 CCDC150Q8NCX0 1101 aa17.98■□□□□ 0.47
CTSD-201ENST00000236671 ZNF330Q9Y3S2 320 aaPredicted RBP17.98■□□□□ 0.47
CTSD-201ENST00000236671 SMC2O95347 1197 aa17.98■□□□□ 0.47
CTSD-201ENST00000236671 ADD2P35612 726 aa17.98■□□□□ 0.47
CTSD-201ENST00000236671 SLC39A14Q15043 492 aa17.98■□□□□ 0.47
CTSD-201ENST00000236671 ZBTB38Q8NAP3 1195 aaPredicted RBP17.98■□□□□ 0.47
CTSD-201ENST00000236671 AIFM3Q96NN9 605 aa17.98■□□□□ 0.47
CTSD-201ENST00000236671 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.98■□□□□ 0.472e-6■■■□□ 17.7
CTSD-201ENST00000236671 ZNF215Q9UL58 517 aaPredicted RBP17.98■□□□□ 0.47
CTSD-201ENST00000236671 ANGEL1Q9UNK9 670 aaKnown RBP17.98■□□□□ 0.47
CTSD-201ENST00000236671 SH2B2O14492 632 aaPredicted RBP17.97■□□□□ 0.47
CTSD-201ENST00000236671 E4F1Q66K89 784 aaPredicted RBP17.97■□□□□ 0.47
CTSD-201ENST00000236671 CYB5R4Q7L1T6 521 aa17.97■□□□□ 0.47
CTSD-201ENST00000236671 TMC6Q7Z403 805 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms