RNA–Protein interactions for RNA: ENST00000230085.12

SNX3-201, Transcript of sorting nexin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-201ENST00000230085 BSDC1Q9NW68 430 aaPredicted RBP24■■□□□ 1.43
SNX3-201ENST00000230085 CTNNA3Q9UI47 895 aa24■■□□□ 1.43
SNX3-201ENST00000230085 LDHAL6AQ6ZMR3 332 aa23.99■■□□□ 1.43
SNX3-201ENST00000230085 SMARCC2Q8TAQ2 1214 aa23.99■■□□□ 1.43
SNX3-201ENST00000230085 EAF2Q96CJ1 260 aaPredicted RBP23.99■■□□□ 1.43
SNX3-201ENST00000230085 TRIM5Q9C035 493 aa23.99■■□□□ 1.43
SNX3-201ENST00000230085 PA2G4Q9UQ80 394 aaKnown RBP23.99■■□□□ 1.43
SNX3-201ENST00000230085 ATP6V0A2Q9Y487 856 aa23.99■■□□□ 1.43
SNX3-201ENST00000230085 KCNJ4P48050 445 aa23.98■■□□□ 1.43
SNX3-201ENST00000230085 FAM193AP78312 1265 aa23.98■■□□□ 1.43
SNX3-201ENST00000230085 CBX1P83916 185 aa23.98■■□□□ 1.43
SNX3-201ENST00000230085 GPR162Q16538 588 aa23.98■■□□□ 1.43
SNX3-201ENST00000230085 NAA16Q6N069 864 aaPredicted RBP23.98■■□□□ 1.43
SNX3-201ENST00000230085 PUS3Q9BZE2 481 aaKnown RBP23.98■■□□□ 1.43
SNX3-201ENST00000230085 A0A0D9SFI3 127 aa23.98■■□□□ 1.43
SNX3-201ENST00000230085 TAF5LO75529 589 aa23.98■■□□□ 1.43
SNX3-201ENST00000230085 SP8Q8IXZ3 490 aa23.98■■□□□ 1.43
SNX3-201ENST00000230085 TNNT1P13805 278 aa23.97■■□□□ 1.43
SNX3-201ENST00000230085 G3BP1Q13283 466 aaKnown RBP eCLIP23.97■■□□□ 1.43
SNX3-201ENST00000230085 SIL1Q9H173 461 aa23.97■■□□□ 1.43
SNX3-201ENST00000230085 DDX41Q9UJV9 622 aaKnown RBP23.97■■□□□ 1.43
SNX3-201ENST00000230085 RCOR1Q9UKL0 485 aa23.97■■□□□ 1.43
SNX3-201ENST00000230085 ARFGEF1Q9Y6D6 1849 aa23.97■■□□□ 1.43
SNX3-201ENST00000230085 NR1I2O75469 434 aa23.96■■□□□ 1.43
SNX3-201ENST00000230085 DHX8Q14562 1220 aaKnown RBP23.96■■□□□ 1.43
SNX3-201ENST00000230085 SLFNL1Q499Z3 407 aa23.96■■□□□ 1.43
SNX3-201ENST00000230085 LRRC24Q50LG9 513 aa23.96■■□□□ 1.43
SNX3-201ENST00000230085 NYAP1Q6ZVC0 841 aa23.96■■□□□ 1.43
SNX3-201ENST00000230085 TMC4Q7Z404 712 aa23.96■■□□□ 1.43
SNX3-201ENST00000230085 PRDM10Q9NQV6 1147 aa23.96■■□□□ 1.43
SNX3-201ENST00000230085 MINPP1Q9UNW1 487 aa23.96■■□□□ 1.43
SNX3-201ENST00000230085 MORC2Q9Y6X9 1032 aaPredicted RBP23.96■■□□□ 1.43
SNX3-201ENST00000230085 LAMA4Q16363 1823 aa23.96■■□□□ 1.43
SNX3-201ENST00000230085 KIF2AO00139 706 aaPredicted RBP23.96■■□□□ 1.43
SNX3-201ENST00000230085 CAMK4Q16566 473 aa23.96■■□□□ 1.43
SNX3-201ENST00000230085 TAF3Q5VWG9 929 aa23.96■■□□□ 1.43
SNX3-201ENST00000230085 FERMT3Q86UX7 667 aa23.96■■□□□ 1.43
SNX3-201ENST00000230085 CCDC112Q8NEF3 446 aa23.96■■□□□ 1.43
SNX3-201ENST00000230085 CACTINQ8WUQ7 758 aaKnown RBP23.96■■□□□ 1.43
SNX3-201ENST00000230085 CNNM1Q9NRU3 951 aa23.96■■□□□ 1.43
SNX3-201ENST00000230085 CLIP2Q9UDT6 1046 aa23.96■■□□□ 1.43
SNX3-201ENST00000230085 STX1AQ16623 288 aa23.95■■□□□ 1.42
SNX3-201ENST00000230085 LRRC8AQ8IWT6 810 aa23.95■■□□□ 1.42
SNX3-201ENST00000230085 CKAP2LQ8IYA6 745 aa23.95■■□□□ 1.42
SNX3-201ENST00000230085 COPRSQ9NQ92 184 aa23.95■■□□□ 1.42
SNX3-201ENST00000230085 ATP5JP18859 108 aa23.94■■□□□ 1.42
SNX3-201ENST00000230085 LRMPQ12912 555 aa23.94■■□□□ 1.42
SNX3-201ENST00000230085 CHMP4CQ96CF2 233 aa23.94■■□□□ 1.42
SNX3-201ENST00000230085 TMX4Q9H1E5 349 aaPredicted RBP23.94■■□□□ 1.42
SNX3-201ENST00000230085 RIPOR2Q9Y4F9 1068 aa23.94■■□□□ 1.42
SNX3-201ENST00000230085 U3KPZ7 1027 aaPredicted RBP23.94■■□□□ 1.42
SNX3-201ENST00000230085 KCNJ6P48051 423 aa23.93■■□□□ 1.42
SNX3-201ENST00000230085 FSD1Q9BTV5 496 aa23.93■■□□□ 1.42
SNX3-201ENST00000230085 FAM53CQ9NYF3 392 aa23.93■■□□□ 1.42
SNX3-201ENST00000230085 HMGB1P09429 215 aaKnown RBP23.93■■□□□ 1.42
SNX3-201ENST00000230085 U2AF2P26368 475 aaKnown RBP eCLIP23.93■■□□□ 1.42
SNX3-201ENST00000230085 ADD1P35611 737 aaKnown RBP23.93■■□□□ 1.42
SNX3-201ENST00000230085 CHRNDQ07001 517 aa23.93■■□□□ 1.42
SNX3-201ENST00000230085 CCDC93Q567U6 631 aa23.93■■□□□ 1.42
SNX3-201ENST00000230085 EYA2O00167 538 aa23.92■■□□□ 1.42
SNX3-201ENST00000230085 TUBB4AP04350 444 aa23.92■■□□□ 1.42
SNX3-201ENST00000230085 GPSM2P81274 684 aa23.92■■□□□ 1.42
SNX3-201ENST00000230085 SOGA3Q5TF21 947 aa23.92■■□□□ 1.42
SNX3-201ENST00000230085 CC2D2BQ6DHV5 1058 aa23.92■■□□□ 1.42
SNX3-201ENST00000230085 FAM173BQ6P4H8 233 aa23.92■■□□□ 1.42
SNX3-201ENST00000230085 CREBRFQ8IUR6 639 aa23.92■■□□□ 1.42
SNX3-201ENST00000230085 DRC7Q8IY82 874 aa23.92■■□□□ 1.42
SNX3-201ENST00000230085 HELBQ8NG08 1087 aaPredicted RBP23.92■■□□□ 1.42
SNX3-201ENST00000230085 AGXT2Q9BYV1 514 aa23.92■■□□□ 1.42
SNX3-201ENST00000230085 DNAJC25Q9H1X3 360 aa23.92■■□□□ 1.42
SNX3-201ENST00000230085 ANKIB1Q9P2G1 1089 aa23.92■■□□□ 1.42
SNX3-201ENST00000230085 NRBP1Q9UHY1 535 aa23.92■■□□□ 1.42
SNX3-201ENST00000230085 LRRC37AA6NMS7 1700 aa23.92■■□□□ 1.42
SNX3-201ENST00000230085 ARHGAP27Q6ZUM4 889 aa23.91■■□□□ 1.42
SNX3-201ENST00000230085 ATG9AQ7Z3C6 839 aa23.91■■□□□ 1.42
SNX3-201ENST00000230085 RGS22Q8NE09 1264 aa23.91■■□□□ 1.42
SNX3-201ENST00000230085 BICD2Q8TD16 824 aa23.91■■□□□ 1.42
SNX3-201ENST00000230085 C16orf45Q96MC5 204 aaPredicted RBP23.91■■□□□ 1.42
SNX3-201ENST00000230085 NEK1Q96PY6 1258 aa23.91■■□□□ 1.42
SNX3-201ENST00000230085 SNED1Q8TER0 1413 aa23.91■■□□□ 1.42
SNX3-201ENST00000230085 WTIPA6NIX2 430 aaPredicted RBP23.91■■□□□ 1.42
SNX3-201ENST00000230085 PFKFB2O60825 505 aa23.91■■□□□ 1.42
SNX3-201ENST00000230085 RTKN2Q8IZC4 609 aa23.91■■□□□ 1.42
SNX3-201ENST00000230085 BRF1Q92994 677 aa23.91■■□□□ 1.42
SNX3-201ENST00000230085 TFIP11Q9UBB9 837 aaKnown RBP23.91■■□□□ 1.42
SNX3-201ENST00000230085 CCDC144BQ3MJ40 725 aa23.9■■□□□ 1.42
SNX3-201ENST00000230085 CEP135Q66GS9 1140 aa23.9■■□□□ 1.42
SNX3-201ENST00000230085 CCDC144CPQ8IYA2 1237 aa23.9■■□□□ 1.42
SNX3-201ENST00000230085 ARID3AQ99856 593 aa23.9■■□□□ 1.42
SNX3-201ENST00000230085 GOLGA6L19H0YKK7 550 aa23.89■■□□□ 1.42
SNX3-201ENST00000230085 GSDMDP57764 484 aa23.89■■□□□ 1.42
SNX3-201ENST00000230085 COL9A3Q14050 684 aaPredicted RBP23.89■■□□□ 1.42
SNX3-201ENST00000230085 DPP8Q6V1X1 898 aaPredicted RBP23.89■■□□□ 1.42
SNX3-201ENST00000230085 FBXL16Q8N461 479 aa23.89■■□□□ 1.42
SNX3-201ENST00000230085 ENGASEQ8NFI3 743 aa23.89■■□□□ 1.42
SNX3-201ENST00000230085 OSBPL5Q9H0X9 879 aaPredicted RBP23.89■■□□□ 1.42
SNX3-201ENST00000230085 IMPACTQ9P2X3 320 aa23.89■■□□□ 1.42
SNX3-201ENST00000230085 FER1L6Q2WGJ9 1857 aa23.89■■□□□ 1.41
SNX3-201ENST00000230085 SNAP23O00161 211 aa23.88■■□□□ 1.41
SNX3-201ENST00000230085 NFKBIEO00221 500 aa23.88■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms