RNA–Protein interactions for RNA: ENST00000229829.6

HLA-DOA-201, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DOA, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-201ENST00000229829 SDF4Q9BRK5 362 aa10.9□□□□□ -0.66
HLA-DOA-201ENST00000229829 BIN1O00499 593 aa10.89□□□□□ -0.67
HLA-DOA-201ENST00000229829 CTAGE5O15320 804 aa10.89□□□□□ -0.67
HLA-DOA-201ENST00000229829 WASHC4Q2M389 1173 aa10.89□□□□□ -0.67
HLA-DOA-201ENST00000229829 DPCR1Q3MIW9 517 aa10.89□□□□□ -0.67
HLA-DOA-201ENST00000229829 CCDC125Q86Z20 511 aa10.89□□□□□ -0.67
HLA-DOA-201ENST00000229829 ZNF330Q9Y3S2 320 aaPredicted RBP10.89□□□□□ -0.67
HLA-DOA-201ENST00000229829 PAXBP1Q9Y5B6 917 aa10.89□□□□□ -0.67
HLA-DOA-201ENST00000229829 CAVIN2O95810 425 aa10.89□□□□□ -0.67
HLA-DOA-201ENST00000229829 FGAP02671 866 aa10.89□□□□□ -0.67
HLA-DOA-201ENST00000229829 CCZ1BP86790 482 aa10.89□□□□□ -0.67
HLA-DOA-201ENST00000229829 CCZ1P86791 482 aaPredicted RBP10.89□□□□□ -0.67
HLA-DOA-201ENST00000229829 ANO10Q9NW15 660 aa10.89□□□□□ -0.67
HLA-DOA-201ENST00000229829 THRAP3Q9Y2W1 955 aaKnown RBP10.89□□□□□ -0.67
HLA-DOA-201ENST00000229829 BMS1Q14692 1282 aaKnown RBP10.89□□□□□ -0.67
HLA-DOA-201ENST00000229829 ISM2Q6H9L7 571 aa10.89□□□□□ -0.67
HLA-DOA-201ENST00000229829 NBPF11Q86T75 865 aa10.89□□□□□ -0.67
HLA-DOA-201ENST00000229829 CNKSR2Q8WXI2 1034 aa10.89□□□□□ -0.67
HLA-DOA-201ENST00000229829 MRPS27Q92552 414 aaKnown RBP10.89□□□□□ -0.67
HLA-DOA-201ENST00000229829 PUS7LQ9H0K6 701 aaKnown RBP10.89□□□□□ -0.67
HLA-DOA-201ENST00000229829 ARHGAP29Q52LW3 1261 aa10.88□□□□□ -0.67
HLA-DOA-201ENST00000229829 EP400NLQ6ZTU2 488 aa10.88□□□□□ -0.67
HLA-DOA-201ENST00000229829 LINC00301Q8NCQ3 95 aa10.88□□□□□ -0.67
HLA-DOA-201ENST00000229829 TSPYL1Q9H0U9 437 aa10.88□□□□□ -0.67
HLA-DOA-201ENST00000229829 HPS5Q9UPZ3 1129 aa10.88□□□□□ -0.67
HLA-DOA-201ENST00000229829 KLF18A0A0U1RQI7 1052 aa10.88□□□□□ -0.67
HLA-DOA-201ENST00000229829 KIF28PB7ZC32 967 aa10.88□□□□□ -0.67
HLA-DOA-201ENST00000229829 MYCNP04198 464 aaPredicted RBP10.88□□□□□ -0.67
HLA-DOA-201ENST00000229829 HSPA1LP34931 641 aa10.88□□□□□ -0.67
HLA-DOA-201ENST00000229829 RBM6P78332 1123 aaKnown RBP10.88□□□□□ -0.67
HLA-DOA-201ENST00000229829 ADALQ6DHV7 355 aa10.88□□□□□ -0.67
HLA-DOA-201ENST00000229829 MNS1Q8NEH6 495 aa10.88□□□□□ -0.67
HLA-DOA-201ENST00000229829 GPR108Q9NPR9 543 aa10.88□□□□□ -0.67
HLA-DOA-201ENST00000229829 PSME4Q14997 1843 aa10.88□□□□□ -0.67
HLA-DOA-201ENST00000229829 NEDD4P46934 1319 aa10.88□□□□□ -0.67
HLA-DOA-201ENST00000229829 GPS2Q13227 327 aa10.88□□□□□ -0.67
HLA-DOA-201ENST00000229829 STK38Q15208 465 aa10.88□□□□□ -0.67
HLA-DOA-201ENST00000229829 SF3A1Q15459 793 aaKnown RBP10.88□□□□□ -0.67
HLA-DOA-201ENST00000229829 SYNE4Q8N205 404 aa10.88□□□□□ -0.67
HLA-DOA-201ENST00000229829 XAGE2Q96GT9 111 aa10.88□□□□□ -0.67
HLA-DOA-201ENST00000229829 AIFM3Q96NN9 605 aa10.88□□□□□ -0.67
HLA-DOA-201ENST00000229829 RTEL1Q9NZ71 1219 aa10.88□□□□□ -0.67
HLA-DOA-201ENST00000229829 PRC1O43663 620 aa10.87□□□□□ -0.67
HLA-DOA-201ENST00000229829 ANTXR2P58335 489 aa10.87□□□□□ -0.67
HLA-DOA-201ENST00000229829 SART3Q15020 963 aaKnown RBP10.87□□□□□ -0.67
HLA-DOA-201ENST00000229829 E2F4Q16254 413 aa10.87□□□□□ -0.67
HLA-DOA-201ENST00000229829 TMCO3Q6UWJ1 677 aa10.87□□□□□ -0.67
HLA-DOA-201ENST00000229829 CEP57L1Q8IYX8 460 aa10.87□□□□□ -0.67
HLA-DOA-201ENST00000229829 C8orf76Q96K31 380 aa10.87□□□□□ -0.67
HLA-DOA-201ENST00000229829 DICER1Q9UPY3 1922 aaKnown RBP10.87□□□□□ -0.67
HLA-DOA-201ENST00000229829 SEC31AO94979 1220 aaKnown RBP10.87□□□□□ -0.67
HLA-DOA-201ENST00000229829 RXRAP19793 462 aa10.87□□□□□ -0.67
HLA-DOA-201ENST00000229829 ZAP70P43403 619 aa10.87□□□□□ -0.67
HLA-DOA-201ENST00000229829 NYAP1Q6ZVC0 841 aa10.87□□□□□ -0.67
HLA-DOA-201ENST00000229829 CEP126Q9P2H0 1117 aa10.87□□□□□ -0.67
HLA-DOA-201ENST00000229829 ORC3Q9UBD5 711 aaPredicted RBP10.87□□□□□ -0.67
HLA-DOA-201ENST00000229829 GOLGA8BA8MQT2 603 aa10.86□□□□□ -0.67
HLA-DOA-201ENST00000229829 SLU7O95391 586 aaKnown RBP10.86□□□□□ -0.67
HLA-DOA-201ENST00000229829 TTC39AQ5SRH9 613 aa10.86□□□□□ -0.67
HLA-DOA-201ENST00000229829 FBXO18Q8NFZ0 1043 aa10.86□□□□□ -0.67
HLA-DOA-201ENST00000229829 FAM89AQ96GI7 184 aa10.86□□□□□ -0.67
HLA-DOA-201ENST00000229829 KIAA1468Q9P260 1216 aa10.86□□□□□ -0.67
HLA-DOA-201ENST00000229829 MARCKSP29966 332 aaPredicted RBP10.86□□□□□ -0.67
HLA-DOA-201ENST00000229829 ST5P78524 1137 aa10.86□□□□□ -0.67
HLA-DOA-201ENST00000229829 GOLGA6L1Q8N7Z2 621 aa10.86□□□□□ -0.67
HLA-DOA-201ENST00000229829 XPO4Q9C0E2 1151 aaKnown RBP10.86□□□□□ -0.67
HLA-DOA-201ENST00000229829 EVCP57679 992 aa10.86□□□□□ -0.67
HLA-DOA-201ENST00000229829 VPS72Q15906 364 aa10.86□□□□□ -0.67
HLA-DOA-201ENST00000229829 IMMTQ16891 758 aaKnown RBP10.86□□□□□ -0.67
HLA-DOA-201ENST00000229829 MYSM1Q5VVJ2 828 aa10.86□□□□□ -0.67
HLA-DOA-201ENST00000229829 ATL3Q6DD88 541 aa10.86□□□□□ -0.67
HLA-DOA-201ENST00000229829 TEX2Q8IWB9 1127 aa10.86□□□□□ -0.67
HLA-DOA-201ENST00000229829 MB21D2Q8IYB1 491 aaPredicted RBP10.86□□□□□ -0.67
HLA-DOA-201ENST00000229829 UBXN4Q92575 508 aa10.86□□□□□ -0.67
HLA-DOA-201ENST00000229829 IFNKQ9P0W0 207 aa10.86□□□□□ -0.67
HLA-DOA-201ENST00000229829 SPTLC2O15270 562 aa10.85□□□□□ -0.67
HLA-DOA-201ENST00000229829 IBSPP21815 317 aaPredicted RBP10.85□□□□□ -0.67
HLA-DOA-201ENST00000229829 PTPN21Q16825 1174 aa10.85□□□□□ -0.67
HLA-DOA-201ENST00000229829 CCDC57Q2TAC2 916 aa10.85□□□□□ -0.67
HLA-DOA-201ENST00000229829 EPC1Q9H2F5 836 aa10.85□□□□□ -0.67
HLA-DOA-201ENST00000229829 LCMT1Q9UIC8 334 aa10.85□□□□□ -0.67
HLA-DOA-201ENST00000229829 LTBP1Q14766 1721 aa10.85□□□□□ -0.67
HLA-DOA-201ENST00000229829 WDHD1O75717 1129 aaPredicted RBP10.85□□□□□ -0.67
HLA-DOA-201ENST00000229829 SMC2O95347 1197 aa10.85□□□□□ -0.67
HLA-DOA-201ENST00000229829 ATF3P18847 181 aa10.85□□□□□ -0.67
HLA-DOA-201ENST00000229829 ZSCAN26Q16670 478 aa10.85□□□□□ -0.67
HLA-DOA-201ENST00000229829 CCDC158Q5M9N0 1113 aa10.85□□□□□ -0.67
HLA-DOA-201ENST00000229829 SENP2Q9HC62 589 aa10.85□□□□□ -0.67
HLA-DOA-201ENST00000229829 UBE2Q2LH0YL09 131 aa10.85□□□□□ -0.67
HLA-DOA-201ENST00000229829 MYO1CO00159 1063 aa10.85□□□□□ -0.67
HLA-DOA-201ENST00000229829 ZNF202O95125 648 aa10.85□□□□□ -0.67
HLA-DOA-201ENST00000229829 TPM4P67936 248 aa10.85□□□□□ -0.67
HLA-DOA-201ENST00000229829 ZSWIM4Q9H7M6 989 aa10.85□□□□□ -0.67
HLA-DOA-201ENST00000229829 ARGLU1Q9NWB6 273 aaPredicted RBP10.85□□□□□ -0.67
HLA-DOA-201ENST00000229829 A0A1W2PQ27 194 aa10.84□□□□□ -0.67
HLA-DOA-201ENST00000229829 A0A1W2PQ64 194 aa10.84□□□□□ -0.67
HLA-DOA-201ENST00000229829 A0A1W2PQD8 194 aa10.84□□□□□ -0.67
HLA-DOA-201ENST00000229829 CPLX1O14810 134 aa10.84□□□□□ -0.67
HLA-DOA-201ENST00000229829 AXDND1Q5T1B0 1012 aaPredicted RBP10.84□□□□□ -0.67
HLA-DOA-201ENST00000229829 ARMCX5Q6P1M9 558 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms