RNA–Protein interactions for RNA: ENST00000227507.2

CCND1-201, Transcript of cyclin D1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCND1, Length 4,307 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-201ENST00000227507 ITGA6P23229 1130 aa13.2□□□□□ -0.3
CCND1-201ENST00000227507 ATP2B2Q01814 1243 aa13.2□□□□□ -0.3
CCND1-201ENST00000227507 SAFBQ15424 915 aaKnown RBP eCLIP13.2□□□□□ -0.3
CCND1-201ENST00000227507 DPCR1Q3MIW9 517 aa13.2□□□□□ -0.3
CCND1-201ENST00000227507 CCDC12Q8WUD4 166 aaPredicted RBP13.2□□□□□ -0.3
CCND1-201ENST00000227507 MRPS27Q92552 414 aaKnown RBP13.2□□□□□ -0.3
CCND1-201ENST00000227507 TM6SF1Q9BZW5 370 aa13.2□□□□□ -0.3
CCND1-201ENST00000227507 NAPBQ9H115 298 aa13.2□□□□□ -0.3
CCND1-201ENST00000227507 MAP3K15Q6ZN16 1313 aa13.2□□□□□ -0.3
CCND1-201ENST00000227507 FAM160A1Q05DH4 1040 aa13.2□□□□□ -0.3
CCND1-201ENST00000227507 OLFM4Q6UX06 510 aa13.2□□□□□ -0.3
CCND1-201ENST00000227507 SEC62Q99442 399 aaKnown RBP13.2□□□□□ -0.3
CCND1-201ENST00000227507 EYA2O00167 538 aa13.19□□□□□ -0.3
CCND1-201ENST00000227507 ST3GAL1Q11201 340 aa13.19□□□□□ -0.3
CCND1-201ENST00000227507 IQCB1Q15051 598 aa13.19□□□□□ -0.3
CCND1-201ENST00000227507 U3KPZ7 1027 aaPredicted RBP13.19□□□□□ -0.3
CCND1-201ENST00000227507 AXDND1Q5T1B0 1012 aaPredicted RBP13.19□□□□□ -0.3
CCND1-201ENST00000227507 E4F1Q66K89 784 aaPredicted RBP13.19□□□□□ -0.3
CCND1-201ENST00000227507 ITSN1Q15811 1721 aa13.19□□□□□ -0.3
CCND1-201ENST00000227507 SALL3Q9BXA9 1300 aa13.19□□□□□ -0.3
CCND1-201ENST00000227507 PTPDC1A2A3K4 754 aa13.19□□□□□ -0.3
CCND1-201ENST00000227507 NECTIN1Q15223 517 aa13.19□□□□□ -0.3
CCND1-201ENST00000227507 PROSER3Q2NL68 480 aa13.19□□□□□ -0.3
CCND1-201ENST00000227507 NYAP1Q6ZVC0 841 aa13.19□□□□□ -0.3
CCND1-201ENST00000227507 SUCLG2Q96I99 432 aa13.19□□□□□ -0.3
CCND1-201ENST00000227507 IQSEC3Q9UPP2 1182 aaPredicted RBP13.19□□□□□ -0.3
CCND1-201ENST00000227507 KDRP35968 1356 aa13.18□□□□□ -0.3
CCND1-201ENST00000227507 ZNF287Q9HBT7 754 aa13.18□□□□□ -0.3
CCND1-201ENST00000227507 AOX1Q06278 1338 aa13.18□□□□□ -0.3
CCND1-201ENST00000227507 COL3A1P02461 1466 aaPredicted RBP13.18□□□□□ -0.3
CCND1-201ENST00000227507 ZSCAN12O43309 604 aa13.18□□□□□ -0.3
CCND1-201ENST00000227507 GIGYF2Q6Y7W6 1299 aaKnown RBP13.18□□□□□ -0.3
CCND1-201ENST00000227507 UBAC1Q9BSL1 405 aa13.18□□□□□ -0.3
CCND1-201ENST00000227507 PRAMEF22A3QJZ6 481 aa13.18□□□□□ -0.3
CCND1-201ENST00000227507 XBP1P17861 261 aa13.18□□□□□ -0.3
CCND1-201ENST00000227507 PLA2G4AP47712 749 aa13.18□□□□□ -0.3
CCND1-201ENST00000227507 KCNQ4P56696 695 aa13.18□□□□□ -0.3
CCND1-201ENST00000227507 ZNF804AQ7Z570 1209 aa13.18□□□□□ -0.3
CCND1-201ENST00000227507 NLGN1Q8N2Q7 840 aa13.18□□□□□ -0.3
CCND1-201ENST00000227507 GOLPH3LQ9H4A5 285 aa13.18□□□□□ -0.3
CCND1-201ENST00000227507 SPATA31A1Q5TZJ5 1347 aa13.18□□□□□ -0.3
CCND1-201ENST00000227507 BAG3O95817 575 aa13.17□□□□□ -0.3
CCND1-201ENST00000227507 JAKMIP3Q5VZ66 844 aa13.17□□□□□ -0.3
CCND1-201ENST00000227507 USPL1Q5W0Q7 1092 aa13.17□□□□□ -0.3
CCND1-201ENST00000227507 ZNF589Q86UQ0 364 aaPredicted RBP13.17□□□□□ -0.3
CCND1-201ENST00000227507 EYA3Q99504 573 aa13.17□□□□□ -0.3
CCND1-201ENST00000227507 LZTFL1Q9NQ48 299 aa13.17□□□□□ -0.3
CCND1-201ENST00000227507 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.17□□□□□ -0.3
CCND1-201ENST00000227507 WWC3Q9ULE0 1092 aa13.17□□□□□ -0.3
CCND1-201ENST00000227507 FHOD1Q9Y613 1164 aa13.17□□□□□ -0.3
CCND1-201ENST00000227507 TTC41PQ6P2S7 1318 aa13.17□□□□□ -0.3
CCND1-201ENST00000227507 CPDO75976 1380 aa13.17□□□□□ -0.3
CCND1-201ENST00000227507 MINDY4BA8MYZ0 360 aa13.17□□□□□ -0.3
CCND1-201ENST00000227507 TPM1P09493 284 aa13.17□□□□□ -0.3
CCND1-201ENST00000227507 FANCCQ00597 558 aa13.17□□□□□ -0.3
CCND1-201ENST00000227507 TFCP2Q12800 502 aa13.17□□□□□ -0.3
CCND1-201ENST00000227507 EP400NLQ6ZTU2 488 aa13.17□□□□□ -0.3
CCND1-201ENST00000227507 CCDC24Q8N4L8 307 aa13.17□□□□□ -0.3
CCND1-201ENST00000227507 USP32Q8NFA0 1604 aa13.17□□□□□ -0.3
CCND1-201ENST00000227507 MYO1CO00159 1063 aa13.17□□□□□ -0.3
CCND1-201ENST00000227507 ATP1A3P13637 1013 aa13.17□□□□□ -0.3
CCND1-201ENST00000227507 DRC1Q96MC2 740 aa13.17□□□□□ -0.3
CCND1-201ENST00000227507 ORC3Q9UBD5 711 aaPredicted RBP13.17□□□□□ -0.3
CCND1-201ENST00000227507 H0YIN7 160 aa13.17□□□□□ -0.3
CCND1-201ENST00000227507 PES1O00541 588 aaKnown RBP13.17□□□□□ -0.3
CCND1-201ENST00000227507 RHOXF2BP0C7M4 288 aa13.17□□□□□ -0.3
CCND1-201ENST00000227507 CDC25BP30305 580 aa13.17□□□□□ -0.3
CCND1-201ENST00000227507 RHOXF2Q9BQY4 288 aa13.17□□□□□ -0.3
CCND1-201ENST00000227507 TLR7Q9NYK1 1049 aaKnown RBP13.17□□□□□ -0.3
CCND1-201ENST00000227507 ZFYP08048 801 aaPredicted RBP13.16□□□□□ -0.3
CCND1-201ENST00000227507 PPP2R3AQ06190 1150 aa13.16□□□□□ -0.3
CCND1-201ENST00000227507 BANK1Q8NDB2 785 aa13.16□□□□□ -0.3
CCND1-201ENST00000227507 MAP4K1Q92918 833 aa13.16□□□□□ -0.3
CCND1-201ENST00000227507 PLEKHA4Q9H4M7 779 aa13.16□□□□□ -0.3
CCND1-201ENST00000227507 KIF4BQ2VIQ3 1234 aa13.16□□□□□ -0.3
CCND1-201ENST00000227507 BEND3Q5T5X7 828 aa13.16□□□□□ -0.3
CCND1-201ENST00000227507 CRACR2BQ8N4Y2 399 aaPredicted RBP13.16□□□□□ -0.3
CCND1-201ENST00000227507 EAF2Q96CJ1 260 aaPredicted RBP13.16□□□□□ -0.3
CCND1-201ENST00000227507 DESI2Q9BSY9 194 aa13.16□□□□□ -0.3
CCND1-201ENST00000227507 EFCC1Q9HA90 598 aa13.16□□□□□ -0.3
CCND1-201ENST00000227507 ATG3Q9NT62 314 aa13.16□□□□□ -0.3
CCND1-201ENST00000227507 EPB41L2O43491 1005 aaKnown RBP13.16□□□□□ -0.3
CCND1-201ENST00000227507 HAND2P61296 217 aa13.16□□□□□ -0.3
CCND1-201ENST00000227507 ARMCX5Q6P1M9 558 aa13.16□□□□□ -0.3
CCND1-201ENST00000227507 IBSPP21815 317 aaPredicted RBP13.15□□□□□ -0.3
CCND1-201ENST00000227507 NDUFA8P51970 172 aa13.15□□□□□ -0.3
CCND1-201ENST00000227507 TOB2Q14106 344 aaPredicted RBP13.15□□□□□ -0.3
CCND1-201ENST00000227507 ZBTB38Q8NAP3 1195 aaPredicted RBP13.15□□□□□ -0.3
CCND1-201ENST00000227507 C8orf76Q96K31 380 aa13.15□□□□□ -0.3
CCND1-201ENST00000227507 RABEP2Q9H5N1 569 aa13.15□□□□□ -0.3
CCND1-201ENST00000227507 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.15□□□□□ -0.3
CCND1-201ENST00000227507 PCCAP05165 728 aaPredicted RBP13.15□□□□□ -0.3
CCND1-201ENST00000227507 RESTQ13127 1097 aa13.15□□□□□ -0.3
CCND1-201ENST00000227507 DHX40Q8IX18 779 aaKnown RBP13.15□□□□□ -0.3
CCND1-201ENST00000227507 DEF6Q9H4E7 631 aa13.15□□□□□ -0.3
CCND1-201ENST00000227507 CHGBP05060 677 aa13.15□□□□□ -0.3
CCND1-201ENST00000227507 SLFNL1Q499Z3 407 aa13.15□□□□□ -0.3
CCND1-201ENST00000227507 BRMS1Q9HCU9 246 aa13.15□□□□□ -0.3
CCND1-201ENST00000227507 GSTO1P78417 241 aa13.15□□□□□ -0.31
CCND1-201ENST00000227507 MSL1Q68DK7 614 aa13.15□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms