RNA–Protein interactions for RNA: ENST00000221922.10

CCDC9-201, Transcript of coiled-coil domain containing 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC9, Length 2,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-201ENST00000221922 C4BP0C0L5 1744 aa25.86■■□□□ 1.73
CCDC9-201ENST00000221922 TAF1LQ8IZX4 1826 aa25.86■■□□□ 1.73
CCDC9-201ENST00000221922 CHD4Q14839 1912 aa25.86■■□□□ 1.73
CCDC9-201ENST00000221922 TBC1D9BQ66K14 1250 aa25.85■■□□□ 1.73
CCDC9-201ENST00000221922 CCDC186Q7Z3E2 898 aa25.85■■□□□ 1.73
CCDC9-201ENST00000221922 NYXQ9GZU5 481 aa25.85■■□□□ 1.73
CCDC9-201ENST00000221922 NBPF3Q9H094 633 aa25.85■■□□□ 1.73
CCDC9-201ENST00000221922 BCAMP50895 628 aa25.84■■□□□ 1.73
CCDC9-201ENST00000221922 C3orf67Q6ZVT6 689 aa25.84■■□□□ 1.73
CCDC9-201ENST00000221922 C8orf76Q96K31 380 aa25.84■■□□□ 1.73
CCDC9-201ENST00000221922 BSDC1Q9NW68 430 aaPredicted RBP25.84■■□□□ 1.73
CCDC9-201ENST00000221922 ANGEL1Q9UNK9 670 aaKnown RBP25.84■■□□□ 1.73
CCDC9-201ENST00000221922 ZNF804BA4D1E1 1349 aa25.84■■□□□ 1.73
CCDC9-201ENST00000221922 CDC25BP30305 580 aa25.84■■□□□ 1.73
CCDC9-201ENST00000221922 CCAR1Q8IX12 1150 aaKnown RBP25.84■■□□□ 1.73
CCDC9-201ENST00000221922 MAGEB6Q8N7X4 407 aa25.84■■□□□ 1.73
CCDC9-201ENST00000221922 USP28Q96RU2 1077 aa25.84■■□□□ 1.73
CCDC9-201ENST00000221922 SBF2Q86WG5 1849 aa25.83■■□□□ 1.73
CCDC9-201ENST00000221922 CEBPZQ03701 1054 aaKnown RBP25.83■■□□□ 1.73
CCDC9-201ENST00000221922 IQCB1Q15051 598 aa25.83■■□□□ 1.73
CCDC9-201ENST00000221922 TBC1D10CQ8IV04 446 aa25.83■■□□□ 1.73
CCDC9-201ENST00000221922 ORC3Q9UBD5 711 aaPredicted RBP25.83■■□□□ 1.73
CCDC9-201ENST00000221922 GUCY1B3Q02153 619 aa25.83■■□□□ 1.72
CCDC9-201ENST00000221922 SNW1Q13573 536 aaKnown RBP25.83■■□□□ 1.72
CCDC9-201ENST00000221922 SARM1Q6SZW1 724 aa25.83■■□□□ 1.72
CCDC9-201ENST00000221922 TMEM87BQ96K49 555 aa25.83■■□□□ 1.72
CCDC9-201ENST00000221922 CCNL1Q9UK58 526 aaPredicted RBP25.83■■□□□ 1.72
CCDC9-201ENST00000221922 PATL2C9JE40 543 aaKnown RBP25.82■■□□□ 1.72
CCDC9-201ENST00000221922 UBE4AQ14139 1066 aa25.82■■□□□ 1.72
CCDC9-201ENST00000221922 ENGASEQ8NFI3 743 aa25.82■■□□□ 1.72
CCDC9-201ENST00000221922 GOLPH3LQ9H4A5 285 aa25.82■■□□□ 1.72
CCDC9-201ENST00000221922 GNPATO15228 680 aa25.81■■□□□ 1.72
CCDC9-201ENST00000221922 CCDC73Q6ZRK6 1079 aa25.81■■□□□ 1.72
CCDC9-201ENST00000221922 DRC7Q8IY82 874 aa25.81■■□□□ 1.72
CCDC9-201ENST00000221922 ZNF710Q8N1W2 664 aa25.81■■□□□ 1.72
CCDC9-201ENST00000221922 FTOQ9C0B1 505 aaKnown RBP eCLIP25.81■■□□□ 1.72
CCDC9-201ENST00000221922 NRBP1Q9UHY1 535 aa25.81■■□□□ 1.72
CCDC9-201ENST00000221922 TAF1P21675 1872 aa25.81■■□□□ 1.72
CCDC9-201ENST00000221922 SH2B2O14492 632 aaPredicted RBP25.81■■□□□ 1.72
CCDC9-201ENST00000221922 GTF2E1P29083 439 aaPredicted RBP25.81■■□□□ 1.72
CCDC9-201ENST00000221922 CHAF1AQ13111 956 aaPredicted RBP25.81■■□□□ 1.72
CCDC9-201ENST00000221922 STX1AQ16623 288 aa25.81■■□□□ 1.72
CCDC9-201ENST00000221922 BICDL1Q6ZP65 573 aa25.81■■□□□ 1.72
CCDC9-201ENST00000221922 ILDR1Q86SU0 546 aaPredicted RBP25.81■■□□□ 1.72
CCDC9-201ENST00000221922 FBXO18Q8NFZ0 1043 aa25.81■■□□□ 1.72
CCDC9-201ENST00000221922 TIAM2Q8IVF5 1701 aa25.81■■□□□ 1.72
CCDC9-201ENST00000221922 CDKL5O76039 1030 aa25.8■■□□□ 1.72
CCDC9-201ENST00000221922 BRAPQ7Z569 592 aa25.8■■□□□ 1.72
CCDC9-201ENST00000221922 GJD4Q96KN9 370 aaPredicted RBP25.8■■□□□ 1.72
CCDC9-201ENST00000221922 SETDB2Q96T68 719 aa25.8■■□□□ 1.72
CCDC9-201ENST00000221922 RTEL1Q9NZ71 1219 aa25.8■■□□□ 1.72
CCDC9-201ENST00000221922 RTCBQ9Y3I0 505 aaKnown RBP25.8■■□□□ 1.72
CCDC9-201ENST00000221922 PNPLA7Q6ZV29 1317 aa25.8■■□□□ 1.72
CCDC9-201ENST00000221922 ZPR1O75312 459 aa25.79■■□□□ 1.72
CCDC9-201ENST00000221922 MBD4O95243 580 aa25.79■■□□□ 1.72
CCDC9-201ENST00000221922 GNAT2P19087 354 aa25.79■■□□□ 1.72
CCDC9-201ENST00000221922 FAM160A1Q05DH4 1040 aa25.79■■□□□ 1.72
CCDC9-201ENST00000221922 NAPBQ9H115 298 aa25.79■■□□□ 1.72
CCDC9-201ENST00000221922 SRP68Q9UHB9 627 aaKnown RBP25.79■■□□□ 1.72
CCDC9-201ENST00000221922 PPFIA3O75145 1194 aa25.79■■□□□ 1.72
CCDC9-201ENST00000221922 CPLX2Q6PUV4 134 aaKnown RBP25.79■■□□□ 1.72
CCDC9-201ENST00000221922 CYB5R4Q7L1T6 521 aa25.79■■□□□ 1.72
CCDC9-201ENST00000221922 GNL3LQ9NVN8 582 aaKnown RBP25.79■■□□□ 1.72
CCDC9-201ENST00000221922 LRMPQ12912 555 aa25.78■■□□□ 1.72
CCDC9-201ENST00000221922 IFNL3Q8IZI9 196 aa25.78■■□□□ 1.72
CCDC9-201ENST00000221922 TSC1Q92574 1164 aa25.78■■□□□ 1.72
CCDC9-201ENST00000221922 CLIP2Q9UDT6 1046 aa25.78■■□□□ 1.72
CCDC9-201ENST00000221922 MINPP1Q9UNW1 487 aa25.78■■□□□ 1.72
CCDC9-201ENST00000221922 METAP2P50579 478 aaKnown RBP eCLIP25.78■■□□□ 1.72
CCDC9-201ENST00000221922 C11orf57Q6ZUT1 292 aaPredicted RBP25.78■■□□□ 1.72
CCDC9-201ENST00000221922 SMIM5Q71RC9 77 aa25.78■■□□□ 1.72
CCDC9-201ENST00000221922 CNNM2Q9H8M5 875 aa25.78■■□□□ 1.72
CCDC9-201ENST00000221922 EPB41L4AQ9HCS5 686 aaPredicted RBP25.78■■□□□ 1.72
CCDC9-201ENST00000221922 ME1P48163 572 aa25.77■■□□□ 1.72
CCDC9-201ENST00000221922 NBPF5PQ86XG9 351 aaPredicted RBP25.77■■□□□ 1.72
CCDC9-201ENST00000221922 MRFAP1L1Q96HT8 127 aa25.77■■□□□ 1.72
CCDC9-201ENST00000221922 B4E1Z4 1266 aa25.76■■□□□ 1.71
CCDC9-201ENST00000221922 GOLGA6L19H0YKK7 550 aa25.76■■□□□ 1.71
CCDC9-201ENST00000221922 KINO60870 393 aaKnown RBP25.76■■□□□ 1.71
CCDC9-201ENST00000221922 NLRP3Q96P20 1036 aa25.76■■□□□ 1.71
CCDC9-201ENST00000221922 ARMT1Q9H993 441 aa25.76■■□□□ 1.71
CCDC9-201ENST00000221922 RIOK3O14730 519 aaKnown RBP25.76■■□□□ 1.71
CCDC9-201ENST00000221922 ONECUT3O60422 494 aaPredicted RBP25.76■■□□□ 1.71
CCDC9-201ENST00000221922 CELF1Q92879 486 aaKnown RBP25.76■■□□□ 1.71
CCDC9-201ENST00000221922 NACAP1Q9BZK3 213 aa25.76■■□□□ 1.71
CCDC9-201ENST00000221922 LRP2BPQ9P2M1 347 aa25.76■■□□□ 1.71
CCDC9-201ENST00000221922 YEATS4O95619 227 aa25.75■■□□□ 1.71
CCDC9-201ENST00000221922 FAM182BQ5T319 152 aa25.75■■□□□ 1.71
CCDC9-201ENST00000221922 APOA5Q6Q788 366 aa25.75■■□□□ 1.71
CCDC9-201ENST00000221922 SGMS1Q86VZ5 419 aa25.75■■□□□ 1.71
CCDC9-201ENST00000221922 KCNG4Q8TDN1 519 aa25.75■■□□□ 1.71
CCDC9-201ENST00000221922 POLR3EQ9NVU0 708 aa25.75■■□□□ 1.71
CCDC9-201ENST00000221922 NEDD4P46934 1319 aa25.75■■□□□ 1.71
CCDC9-201ENST00000221922 GSG1L2A8MUP6 293 aa25.75■■□□□ 1.71
CCDC9-201ENST00000221922 MEX3CQ5U5Q3 659 aaKnown RBP25.75■■□□□ 1.71
CCDC9-201ENST00000221922 TPTE2Q6XPS3 522 aa25.75■■□□□ 1.71
CCDC9-201ENST00000221922 ARHGEF1Q92888 912 aaKnown RBP25.75■■□□□ 1.71
CCDC9-201ENST00000221922 CCDC94Q9BW85 323 aaPredicted RBP25.75■■□□□ 1.71
CCDC9-201ENST00000221922 KRT23Q9C075 422 aa25.75■■□□□ 1.71
CCDC9-201ENST00000221922 A0A1W2PQ27 194 aa25.74■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms