RNA–Protein interactions for RNA: ENST00000219084.10

CHD9-201, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 8,739 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-201ENST00000219084 CADPS2Q86UW7 1296 aa4.96□□□□□ -1.61
CHD9-201ENST00000219084 MAIP1Q8WWC4 291 aa4.96□□□□□ -1.61
CHD9-201ENST00000219084 BCAP29Q9UHQ4 241 aa4.96□□□□□ -1.61
CHD9-201ENST00000219084 MAGI2Q86UL8 1455 aa4.96□□□□□ -1.62
CHD9-201ENST00000219084 VGLL3A8MV65 326 aa4.96□□□□□ -1.62
CHD9-201ENST00000219084 BUB1BO60566 1050 aaPredicted RBP4.96□□□□□ -1.62
CHD9-201ENST00000219084 TSPY3P0CV98 308 aa4.96□□□□□ -1.62
CHD9-201ENST00000219084 TSPY8P0CW00 308 aa4.96□□□□□ -1.62
CHD9-201ENST00000219084 IMPG2Q9BZV3 1241 aa4.96□□□□□ -1.62
CHD9-201ENST00000219084 ABCC4O15439 1325 aa4.96□□□□□ -1.62
CHD9-201ENST00000219084 ANKRD26Q9UPS8 1709 aa4.96□□□□□ -1.62
CHD9-201ENST00000219084 ATP10DQ9P241 1426 aa4.96□□□□□ -1.62
CHD9-201ENST00000219084 PER1O15534 1290 aaPredicted RBP4.96□□□□□ -1.62
CHD9-201ENST00000219084 RBM5P52756 815 aaKnown RBP eCLIP4.96□□□□□ -1.62
CHD9-201ENST00000219084 NLRP12P59046 1061 aa4.96□□□□□ -1.62
CHD9-201ENST00000219084 WHAMMP3Q1A5X7 153 aa4.96□□□□□ -1.62
CHD9-201ENST00000219084 SEL1L2Q5TEA6 688 aa4.96□□□□□ -1.62
CHD9-201ENST00000219084 FYB2Q5VWT5 728 aa4.96□□□□□ -1.62
CHD9-201ENST00000219084 DTHD1Q6ZMT9 781 aa4.96□□□□□ -1.62
CHD9-201ENST00000219084 PPP1R14CQ8TAE6 165 aa4.96□□□□□ -1.62
CHD9-201ENST00000219084 NOX5Q96PH1 765 aa4.96□□□□□ -1.62
CHD9-201ENST00000219084 FAM184BQ9ULE4 1060 aa4.96□□□□□ -1.62
CHD9-201ENST00000219084 A2ML1A8K2U0 1454 aa4.96□□□□□ -1.62
CHD9-201ENST00000219084 MED14O60244 1454 aa4.96□□□□□ -1.62
CHD9-201ENST00000219084 STX10O60499 249 aa4.96□□□□□ -1.62
CHD9-201ENST00000219084 ST5P78524 1137 aa4.96□□□□□ -1.62
CHD9-201ENST00000219084 ATP2B3Q16720 1220 aa4.96□□□□□ -1.62
CHD9-201ENST00000219084 CACNA2D3Q8IZS8 1091 aa4.96□□□□□ -1.62
CHD9-201ENST00000219084 BRF1Q92994 677 aa4.96□□□□□ -1.62
CHD9-201ENST00000219084 DNAJC25Q9H1X3 360 aa4.96□□□□□ -1.62
CHD9-201ENST00000219084 VCX3BQ9H321 246 aa4.96□□□□□ -1.62
CHD9-201ENST00000219084 HAUS2Q9NVX0 235 aa4.96□□□□□ -1.62
CHD9-201ENST00000219084 GALNT17Q6IS24 598 aa4.96□□□□□ -1.62
CHD9-201ENST00000219084 ARMC9Q7Z3E5 817 aa4.96□□□□□ -1.62
CHD9-201ENST00000219084 CCDC8Q9H0W5 538 aaPredicted RBP4.96□□□□□ -1.62
CHD9-201ENST00000219084 CHPF2Q9P2E5 772 aa4.96□□□□□ -1.62
CHD9-201ENST00000219084 CPSF2Q9P2I0 782 aaKnown RBP4.96□□□□□ -1.62
CHD9-201ENST00000219084 PRC1O43663 620 aa4.96□□□□□ -1.62
CHD9-201ENST00000219084 CALUO43852 315 aaPredicted RBP4.96□□□□□ -1.62
CHD9-201ENST00000219084 TSNAXIP1Q2TAA8 658 aa4.96□□□□□ -1.62
CHD9-201ENST00000219084 HAUS3Q68CZ6 603 aa4.96□□□□□ -1.62
CHD9-201ENST00000219084 CCDC65Q8IXS2 484 aa4.96□□□□□ -1.62
CHD9-201ENST00000219084 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.96□□□□□ -1.62
CHD9-201ENST00000219084 FRMD4BQ9Y2L6 1034 aa4.96□□□□□ -1.62
CHD9-201ENST00000219084 CLTCL1P53675 1640 aa4.95□□□□□ -1.62
CHD9-201ENST00000219084 KIF3CO14782 793 aa4.95□□□□□ -1.62
CHD9-201ENST00000219084 LUC7L3O95232 432 aaKnown RBP4.95□□□□□ -1.62
CHD9-201ENST00000219084 APOBRQ0VD83 1088 aa4.95□□□□□ -1.62
CHD9-201ENST00000219084 NMIQ13287 307 aaPredicted RBP4.95□□□□□ -1.62
CHD9-201ENST00000219084 MCM6Q14566 821 aa4.95□□□□□ -1.62
CHD9-201ENST00000219084 CCDC6Q16204 474 aa4.95□□□□□ -1.62
CHD9-201ENST00000219084 LDHAL6AQ6ZMR3 332 aa4.95□□□□□ -1.62
CHD9-201ENST00000219084 MRFAP1L1Q96HT8 127 aa4.95□□□□□ -1.62
CHD9-201ENST00000219084 RAB3IPQ96QF0 476 aaPredicted RBP4.95□□□□□ -1.62
CHD9-201ENST00000219084 MTMR7Q9Y216 660 aa4.95□□□□□ -1.62
CHD9-201ENST00000219084 AMOTL2Q9Y2J4 779 aa4.95□□□□□ -1.62
CHD9-201ENST00000219084 DMRT2Q9Y5R5 561 aa4.95□□□□□ -1.62
CHD9-201ENST00000219084 EFCAB8A8MWE9 144 aa4.95□□□□□ -1.62
CHD9-201ENST00000219084 F6X3S4 739 aa4.95□□□□□ -1.62
CHD9-201ENST00000219084 NOL3O60936 208 aaKnown RBP4.95□□□□□ -1.62
CHD9-201ENST00000219084 RAPGEF3O95398 923 aa4.95□□□□□ -1.62
CHD9-201ENST00000219084 CALCOCO2Q13137 446 aa4.95□□□□□ -1.62
CHD9-201ENST00000219084 PAK2Q13177 524 aa4.95□□□□□ -1.62
CHD9-201ENST00000219084 UTP14CQ5TAP6 766 aaKnown RBP4.95□□□□□ -1.62
CHD9-201ENST00000219084 HS2ST1Q7LGA3 356 aa4.95□□□□□ -1.62
CHD9-201ENST00000219084 CPLX4Q7Z7G2 160 aa4.95□□□□□ -1.62
CHD9-201ENST00000219084 ANAPC4Q9UJX5 808 aa4.95□□□□□ -1.62
CHD9-201ENST00000219084 ZBTB7BO15156 539 aaPredicted RBP4.95□□□□□ -1.62
CHD9-201ENST00000219084 MYL1P05976 194 aa4.95□□□□□ -1.62
CHD9-201ENST00000219084 RBM6P78332 1123 aaKnown RBP4.95□□□□□ -1.62
CHD9-201ENST00000219084 LMNTD2Q8IXW0 634 aa4.95□□□□□ -1.62
CHD9-201ENST00000219084 PAF1Q8N7H5 531 aa4.95□□□□□ -1.62
CHD9-201ENST00000219084 DDX54Q8TDD1 881 aaKnown RBP4.95□□□□□ -1.62
CHD9-201ENST00000219084 SIRT1Q96EB6 747 aa4.95□□□□□ -1.62
CHD9-201ENST00000219084 MEIS3Q99687 375 aa4.95□□□□□ -1.62
CHD9-201ENST00000219084 DSCC1Q9BVC3 393 aa4.95□□□□□ -1.62
CHD9-201ENST00000219084 CABP5Q9NP86 173 aa4.95□□□□□ -1.62
CHD9-201ENST00000219084 NKIRAS1Q9NYS0 192 aa4.95□□□□□ -1.62
CHD9-201ENST00000219084 VPS18Q9P253 973 aa4.95□□□□□ -1.62
CHD9-201ENST00000219084 RSPH14Q9UHP6 348 aa4.95□□□□□ -1.62
CHD9-201ENST00000219084 ANGEL1Q9UNK9 670 aaKnown RBP4.95□□□□□ -1.62
CHD9-201ENST00000219084 KDRP35968 1356 aa4.95□□□□□ -1.62
CHD9-201ENST00000219084 NEURL4Q96JN8 1562 aa4.95□□□□□ -1.62
CHD9-201ENST00000219084 PTPDC1A2A3K4 754 aa4.95□□□□□ -1.62
CHD9-201ENST00000219084 PPFIA4O75335 1185 aa4.95□□□□□ -1.62
CHD9-201ENST00000219084 CIB2O75838 187 aa4.95□□□□□ -1.62
CHD9-201ENST00000219084 EPB41P11171 864 aaKnown RBP4.95□□□□□ -1.62
CHD9-201ENST00000219084 ASIC1P78348 528 aa4.95□□□□□ -1.62
CHD9-201ENST00000219084 SLC20A2Q08357 652 aa4.95□□□□□ -1.62
CHD9-201ENST00000219084 MAP7Q14244 749 aa4.95□□□□□ -1.62
CHD9-201ENST00000219084 AFAP1L2Q8N4X5 818 aa4.95□□□□□ -1.62
CHD9-201ENST00000219084 DCAF5Q96JK2 942 aa4.95□□□□□ -1.62
CHD9-201ENST00000219084 RAB17Q9H0T7 212 aa4.95□□□□□ -1.62
CHD9-201ENST00000219084 MLH3Q9UHC1 1453 aa4.95□□□□□ -1.62
CHD9-201ENST00000219084 BIN1O00499 593 aa4.95□□□□□ -1.62
CHD9-201ENST00000219084 CFAP221Q4G0U5 840 aa4.95□□□□□ -1.62
CHD9-201ENST00000219084 KRT79Q5XKE5 535 aa4.95□□□□□ -1.62
CHD9-201ENST00000219084 ZSCAN29Q8IWY8 852 aaPredicted RBP4.95□□□□□ -1.62
CHD9-201ENST00000219084 CDCA7Q9BWT1 371 aaPredicted RBP4.95□□□□□ -1.62
CHD9-201ENST00000219084 VCXQ9H320 206 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 108.4 ms