RNA–Protein interactions for RNA: ENST00000217109.8

CSTF1-201, Transcript of cleavage stimulation factor subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF1, Length 4,290 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-201ENST00000217109 PNOCQ13519 176 aa11.2□□□□□ -0.62
CSTF1-201ENST00000217109 DPCR1Q3MIW9 517 aa11.2□□□□□ -0.62
CSTF1-201ENST00000217109 KRI1Q8N9T8 703 aaKnown RBP11.2□□□□□ -0.62
CSTF1-201ENST00000217109 CARD10Q9BWT7 1032 aa11.2□□□□□ -0.62
CSTF1-201ENST00000217109 YEATS4O95619 227 aa11.2□□□□□ -0.62
CSTF1-201ENST00000217109 U2AF2P26368 475 aaKnown RBP eCLIP11.2□□□□□ -0.624e-14■□□□□ 8
CSTF1-201ENST00000217109 GNG11P61952 73 aa11.2□□□□□ -0.62
CSTF1-201ENST00000217109 ST3GAL1Q11201 340 aa11.2□□□□□ -0.62
CSTF1-201ENST00000217109 BRINP3Q76B58 766 aa11.2□□□□□ -0.62
CSTF1-201ENST00000217109 TDRD7Q8NHU6 1098 aaKnown RBP11.2□□□□□ -0.62
CSTF1-201ENST00000217109 MAP3K15Q6ZN16 1313 aa11.2□□□□□ -0.62
CSTF1-201ENST00000217109 VIRMAQ69YN4 1812 aaKnown RBP11.2□□□□□ -0.62
CSTF1-201ENST00000217109 BTBD18B2RXH4 712 aa11.2□□□□□ -0.62
CSTF1-201ENST00000217109 SAMD1Q6SPF0 538 aaPredicted RBP11.2□□□□□ -0.62
CSTF1-201ENST00000217109 TMTC2Q8N394 836 aa11.2□□□□□ -0.62
CSTF1-201ENST00000217109 DLG5Q8TDM6 1919 aa11.19□□□□□ -0.62
CSTF1-201ENST00000217109 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.19□□□□□ -0.62
CSTF1-201ENST00000217109 ZSCAN12O43309 604 aa11.19□□□□□ -0.62
CSTF1-201ENST00000217109 MCAMP43121 646 aa11.19□□□□□ -0.62
CSTF1-201ENST00000217109 FANCCQ00597 558 aa11.19□□□□□ -0.62
CSTF1-201ENST00000217109 MYL5Q02045 173 aa11.19□□□□□ -0.62
CSTF1-201ENST00000217109 TEX35Q5T0J7 233 aa11.19□□□□□ -0.62
CSTF1-201ENST00000217109 SDR42E1Q8WUS8 393 aa11.19□□□□□ -0.62
CSTF1-201ENST00000217109 SEC31BQ9NQW1 1179 aa11.19□□□□□ -0.62
CSTF1-201ENST00000217109 STX8Q9UNK0 236 aa11.19□□□□□ -0.62
CSTF1-201ENST00000217109 TRIM75PA6NK02 468 aa11.19□□□□□ -0.62
CSTF1-201ENST00000217109 NLRP10Q86W26 655 aa11.19□□□□□ -0.62
CSTF1-201ENST00000217109 IFNL3Q8IZI9 196 aa11.19□□□□□ -0.62
CSTF1-201ENST00000217109 TTLL11Q8NHH1 800 aa11.19□□□□□ -0.62
CSTF1-201ENST00000217109 UTYO14607 1347 aa11.19□□□□□ -0.62
CSTF1-201ENST00000217109 MED23Q9ULK4 1368 aa11.19□□□□□ -0.62
CSTF1-201ENST00000217109 TSGA10IPQ3SY00 556 aa11.19□□□□□ -0.62
CSTF1-201ENST00000217109 ARHGAP29Q52LW3 1261 aa11.19□□□□□ -0.62
CSTF1-201ENST00000217109 LRRC8AQ8IWT6 810 aa11.19□□□□□ -0.62
CSTF1-201ENST00000217109 LINC00301Q8NCQ3 95 aa11.19□□□□□ -0.62
CSTF1-201ENST00000217109 CCDC94Q9BW85 323 aaPredicted RBP11.19□□□□□ -0.62
CSTF1-201ENST00000217109 GOLPH3LQ9H4A5 285 aa11.19□□□□□ -0.62
CSTF1-201ENST00000217109 RTEL1Q9NZ71 1219 aa11.19□□□□□ -0.62
CSTF1-201ENST00000217109 CGNQ9P2M7 1197 aaKnown RBP11.19□□□□□ -0.62
CSTF1-201ENST00000217109 V9GY48 417 aaPredicted RBP11.19□□□□□ -0.62
CSTF1-201ENST00000217109 VAT1LQ9HCJ6 419 aa11.18□□□□□ -0.62
CSTF1-201ENST00000217109 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.18□□□□□ -0.62
CSTF1-201ENST00000217109 PRKAB2O43741 272 aa11.18□□□□□ -0.62
CSTF1-201ENST00000217109 AKNAD1Q5T1N1 836 aa11.18□□□□□ -0.62
CSTF1-201ENST00000217109 USPL1Q5W0Q7 1092 aa11.18□□□□□ -0.62
CSTF1-201ENST00000217109 APOA5Q6Q788 366 aa11.18□□□□□ -0.62
CSTF1-201ENST00000217109 NBPF5PQ86XG9 351 aaPredicted RBP11.18□□□□□ -0.62
CSTF1-201ENST00000217109 STAMQ92783 540 aa11.18□□□□□ -0.62
CSTF1-201ENST00000217109 PIH1D3Q9NQM4 214 aaKnown RBP11.18□□□□□ -0.62
CSTF1-201ENST00000217109 MAGEC2Q9UBF1 373 aaPredicted RBP11.18□□□□□ -0.62
CSTF1-201ENST00000217109 C1orf167Q5SNV9 1468 aa11.18□□□□□ -0.62
CSTF1-201ENST00000217109 PATL2C9JE40 543 aaKnown RBP11.18□□□□□ -0.62
CSTF1-201ENST00000217109 ZNF174Q15697 407 aa11.18□□□□□ -0.62
CSTF1-201ENST00000217109 ZNF827Q17R98 1081 aa11.18□□□□□ -0.62
CSTF1-201ENST00000217109 TRMT44Q8IYL2 757 aaKnown RBP11.18□□□□□ -0.62
CSTF1-201ENST00000217109 A0A0U1RQG5 324 aaPredicted RBP11.18□□□□□ -0.62
CSTF1-201ENST00000217109 GYG1P46976 350 aa11.18□□□□□ -0.62
CSTF1-201ENST00000217109 NLRP12P59046 1061 aa11.18□□□□□ -0.62
CSTF1-201ENST00000217109 ERICH4A6NGS2 130 aa11.17□□□□□ -0.62
CSTF1-201ENST00000217109 GNAT2P19087 354 aa11.17□□□□□ -0.62
CSTF1-201ENST00000217109 ADD2P35612 726 aa11.17□□□□□ -0.62
CSTF1-201ENST00000217109 NAP1L1P55209 391 aaKnown RBP11.17□□□□□ -0.62
CSTF1-201ENST00000217109 CCDC194A0A1B0GVG4 234 aa11.17□□□□□ -0.62
CSTF1-201ENST00000217109 SLU7O95391 586 aaKnown RBP11.17□□□□□ -0.62
CSTF1-201ENST00000217109 KCNQ4P56696 695 aa11.17□□□□□ -0.62
CSTF1-201ENST00000217109 ZNF444Q8N0Y2 327 aaPredicted RBP11.17□□□□□ -0.62
CSTF1-201ENST00000217109 ATG3Q9NT62 314 aa11.17□□□□□ -0.62
CSTF1-201ENST00000217109 VPS54Q9P1Q0 977 aa11.17□□□□□ -0.62
CSTF1-201ENST00000217109 CASQ1P31415 396 aa11.17□□□□□ -0.62
CSTF1-201ENST00000217109 NGLY1Q96IV0 654 aa11.17□□□□□ -0.62
CSTF1-201ENST00000217109 VWA3AA6NCI4 1184 aa11.16□□□□□ -0.62
CSTF1-201ENST00000217109 KIF23Q02241 960 aaPredicted RBP11.16□□□□□ -0.62
CSTF1-201ENST00000217109 SOGA3Q5TF21 947 aa11.16□□□□□ -0.62
CSTF1-201ENST00000217109 TMCO3Q6UWJ1 677 aa11.16□□□□□ -0.62
CSTF1-201ENST00000217109 CDK5RAP3Q96JB5 506 aa11.16□□□□□ -0.62
CSTF1-201ENST00000217109 TFCP2L1Q9NZI6 479 aa11.16□□□□□ -0.62
CSTF1-201ENST00000217109 N4BP3O15049 544 aa11.16□□□□□ -0.62
CSTF1-201ENST00000217109 CMA1P23946 247 aa11.16□□□□□ -0.62
CSTF1-201ENST00000217109 GPS2Q13227 327 aa11.16□□□□□ -0.62
CSTF1-201ENST00000217109 KARSQ15046 597 aaKnown RBP11.16□□□□□ -0.62
CSTF1-201ENST00000217109 KIF4BQ2VIQ3 1234 aa11.16□□□□□ -0.62
CSTF1-201ENST00000217109 GOLGA6L1Q8N7Z2 621 aa11.16□□□□□ -0.62
CSTF1-201ENST00000217109 SMARCC2Q8TAQ2 1214 aa11.16□□□□□ -0.62
CSTF1-201ENST00000217109 NLRP3Q96P20 1036 aa11.16□□□□□ -0.62
CSTF1-201ENST00000217109 PLIN2Q99541 437 aa11.16□□□□□ -0.62
CSTF1-201ENST00000217109 NUP88Q99567 741 aaPredicted RBP11.16□□□□□ -0.62
CSTF1-201ENST00000217109 KAT14Q9H8E8 782 aa11.16□□□□□ -0.62
CSTF1-201ENST00000217109 ZSWIM5Q9P217 1185 aa11.16□□□□□ -0.62
CSTF1-201ENST00000217109 ZMYM6O95789 1325 aa11.16□□□□□ -0.62
CSTF1-201ENST00000217109 SSBP05455 408 aaKnown RBP eCLIP11.16□□□□□ -0.62
CSTF1-201ENST00000217109 MCM7P33993 719 aa11.16□□□□□ -0.62
CSTF1-201ENST00000217109 PDE4BQ07343 736 aa11.16□□□□□ -0.62
CSTF1-201ENST00000217109 STIM1Q13586 685 aa11.16□□□□□ -0.62
CSTF1-201ENST00000217109 RILPL1Q5EBL4 403 aa11.16□□□□□ -0.62
CSTF1-201ENST00000217109 MRFAP1L1Q96HT8 127 aa11.16□□□□□ -0.62
CSTF1-201ENST00000217109 CRNKL1Q9BZJ0 848 aaKnown RBP11.16□□□□□ -0.62
CSTF1-201ENST00000217109 CCDC87Q9NVE4 849 aa11.16□□□□□ -0.62
CSTF1-201ENST00000217109 MCM9Q9NXL9 1143 aa11.16□□□□□ -0.62
CSTF1-201ENST00000217109 NFE2L3Q9Y4A8 694 aa11.16□□□□□ -0.62
CSTF1-201ENST00000217109 MROH5Q6ZUA9 1318 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms