RNA–Protein interactions for RNA: ENST00000215829.7

SNRPD3-201, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPD3, Length 1,763 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-201ENST00000215829 EPB41L4AQ9HCS5 686 aaPredicted RBP19■□□□□ 0.63
SNRPD3-201ENST00000215829 TAF6LQ9Y6J9 622 aa19■□□□□ 0.63
SNRPD3-201ENST00000215829 GAKO14976 1311 aa18.99■□□□□ 0.63
SNRPD3-201ENST00000215829 F8W031 263 aaPredicted RBP18.99■□□□□ 0.63
SNRPD3-201ENST00000215829 PSMA5P28066 241 aa18.99■□□□□ 0.63
SNRPD3-201ENST00000215829 NEK4P51957 841 aa18.99■□□□□ 0.63
SNRPD3-201ENST00000215829 JAKMIP1Q96N16 626 aaKnown RBP18.99■□□□□ 0.63
SNRPD3-201ENST00000215829 MRIQ9BWK5 157 aa18.99■□□□□ 0.63
SNRPD3-201ENST00000215829 TBC1D2Q9BYX2 928 aa18.99■□□□□ 0.63
SNRPD3-201ENST00000215829 CRNKL1Q9BZJ0 848 aaKnown RBP18.99■□□□□ 0.63
SNRPD3-201ENST00000215829 NAPBQ9H115 298 aa18.99■□□□□ 0.63
SNRPD3-201ENST00000215829 PSME4Q14997 1843 aa18.99■□□□□ 0.63
SNRPD3-201ENST00000215829 SRCAPQ6ZRS2 3230 aa18.99■□□□□ 0.63
SNRPD3-201ENST00000215829 ZNF213O14771 459 aa18.98■□□□□ 0.63
SNRPD3-201ENST00000215829 ST18O60284 1047 aa18.98■□□□□ 0.63
SNRPD3-201ENST00000215829 SDR42E1Q8WUS8 393 aa18.98■□□□□ 0.63
SNRPD3-201ENST00000215829 ZSWIM6Q9HCJ5 1215 aa18.98■□□□□ 0.63
SNRPD3-201ENST00000215829 CASTP20810 708 aaKnown RBP18.98■□□□□ 0.63
SNRPD3-201ENST00000215829 BTDP43251 543 aa18.98■□□□□ 0.63
SNRPD3-201ENST00000215829 GIMAP6Q6P9H5 292 aa18.98■□□□□ 0.63
SNRPD3-201ENST00000215829 JDP2Q8WYK2 163 aa18.98■□□□□ 0.63
SNRPD3-201ENST00000215829 UPF3BQ9BZI7 483 aaKnown RBP18.98■□□□□ 0.63
SNRPD3-201ENST00000215829 RAD17O75943 681 aa18.97■□□□□ 0.63
SNRPD3-201ENST00000215829 VIL1P09327 827 aaKnown RBP18.97■□□□□ 0.63
SNRPD3-201ENST00000215829 TDO2P48775 406 aa18.97■□□□□ 0.63
SNRPD3-201ENST00000215829 HHIPL2Q6UWX4 724 aa18.97■□□□□ 0.63
SNRPD3-201ENST00000215829 ATP8A2Q9NTI2 1148 aa18.97■□□□□ 0.63
SNRPD3-201ENST00000215829 DAGLAQ9Y4D2 1042 aa18.97■□□□□ 0.63
SNRPD3-201ENST00000215829 CD2BP2O95400 341 aaKnown RBP18.96■□□□□ 0.63
SNRPD3-201ENST00000215829 PLCG2P16885 1265 aa18.96■□□□□ 0.63
SNRPD3-201ENST00000215829 HAND2P61296 217 aa18.96■□□□□ 0.63
SNRPD3-201ENST00000215829 HDLBPQ00341 1268 aaKnown RBP18.96■□□□□ 0.63
SNRPD3-201ENST00000215829 RASSF7Q02833 373 aa18.96■□□□□ 0.63
SNRPD3-201ENST00000215829 KIAA0825Q8IV33 1275 aa18.96■□□□□ 0.63
SNRPD3-201ENST00000215829 HSCBQ8IWL3 235 aa18.96■□□□□ 0.63
SNRPD3-201ENST00000215829 SH3RF3Q8TEJ3 882 aaPredicted RBP18.96■□□□□ 0.63
SNRPD3-201ENST00000215829 MYO3BQ8WXR4 1341 aa18.96■□□□□ 0.63
SNRPD3-201ENST00000215829 E7EWF7 191 aa18.96■□□□□ 0.63
SNRPD3-201ENST00000215829 PSMD14O00487 310 aa18.96■□□□□ 0.63
SNRPD3-201ENST00000215829 SCNN1DP51172 638 aa18.96■□□□□ 0.63
SNRPD3-201ENST00000215829 RSBN1LQ6PCB5 846 aaPredicted RBP18.96■□□□□ 0.63
SNRPD3-201ENST00000215829 STOX1Q6ZVD7 989 aa18.96■□□□□ 0.63
SNRPD3-201ENST00000215829 RUFY3Q7L099 469 aa18.96■□□□□ 0.63
SNRPD3-201ENST00000215829 TEKT1Q969V4 418 aa18.96■□□□□ 0.63
SNRPD3-201ENST00000215829 NEK1Q96PY6 1258 aa18.96■□□□□ 0.63
SNRPD3-201ENST00000215829 DAXXQ9UER7 740 aaPredicted RBP18.96■□□□□ 0.63
SNRPD3-201ENST00000215829 CYP46A1Q9Y6A2 500 aa18.96■□□□□ 0.63
SNRPD3-201ENST00000215829 BLOC1S2Q6QNY1 142 aa18.95■□□□□ 0.62
SNRPD3-201ENST00000215829 DCP1AQ9NPI6 582 aaPredicted RBP18.95■□□□□ 0.62
SNRPD3-201ENST00000215829 CPA1P15085 419 aa18.94■□□□□ 0.62
SNRPD3-201ENST00000215829 CRKP46108 304 aa18.94■□□□□ 0.62
SNRPD3-201ENST00000215829 PRELPP51888 382 aa18.94■□□□□ 0.62
SNRPD3-201ENST00000215829 CXCL9Q07325 125 aa18.94■□□□□ 0.62
SNRPD3-201ENST00000215829 ARHGAP27Q6ZUM4 889 aa18.94■□□□□ 0.62
SNRPD3-201ENST00000215829 TTC14Q96N46 770 aa18.94■□□□□ 0.62
SNRPD3-201ENST00000215829 HMGB1P09429 215 aaKnown RBP18.93■□□□□ 0.62
SNRPD3-201ENST00000215829 SLC4A3P48751 1232 aa18.93■□□□□ 0.62
SNRPD3-201ENST00000215829 MCM2P49736 904 aa18.93■□□□□ 0.62
SNRPD3-201ENST00000215829 RHBDL3P58872 404 aa18.93■□□□□ 0.62
SNRPD3-201ENST00000215829 ZDHHC15Q96MV8 337 aa18.93■□□□□ 0.62
SNRPD3-201ENST00000215829 GMLQ99445 158 aa18.93■□□□□ 0.62
SNRPD3-201ENST00000215829 NBPF3Q9H094 633 aa18.93■□□□□ 0.62
SNRPD3-201ENST00000215829 SERPINA10Q9UK55 444 aa18.93■□□□□ 0.62
SNRPD3-201ENST00000215829 LAMA4Q16363 1823 aa18.93■□□□□ 0.62
SNRPD3-201ENST00000215829 RPS6KB1P23443 525 aa18.93■□□□□ 0.62
SNRPD3-201ENST00000215829 USP5P45974 858 aa18.93■□□□□ 0.62
SNRPD3-201ENST00000215829 PDRG1Q9NUG6 133 aa18.93■□□□□ 0.62
SNRPD3-201ENST00000215829 MKRN1Q9UHC7 482 aaKnown RBP18.93■□□□□ 0.62
SNRPD3-201ENST00000215829 COL9A3Q14050 684 aaPredicted RBP18.92■□□□□ 0.62
SNRPD3-201ENST00000215829 CIAPIN1Q6FI81 312 aa18.92■□□□□ 0.62
SNRPD3-201ENST00000215829 APOBEC3HQ6NTF7 200 aaKnown RBP18.92■□□□□ 0.62
SNRPD3-201ENST00000215829 CTR9Q6PD62 1173 aa18.92■□□□□ 0.62
SNRPD3-201ENST00000215829 TEX11Q8IYF3 940 aa18.92■□□□□ 0.62
SNRPD3-201ENST00000215829 AGBL3Q8NEM8 1001 aa18.92■□□□□ 0.62
SNRPD3-201ENST00000215829 TGFBRAP1Q8WUH2 860 aa18.92■□□□□ 0.62
SNRPD3-201ENST00000215829 ANAPC4Q9UJX5 808 aa18.92■□□□□ 0.62
SNRPD3-201ENST00000215829 BAZ2AQ9UIF9 1905 aaKnown RBP18.92■□□□□ 0.62
SNRPD3-201ENST00000215829 K7ELQ4 463 aaPredicted RBP18.91■□□□□ 0.62
SNRPD3-201ENST00000215829 SOCS7O14512 581 aa18.91■□□□□ 0.62
SNRPD3-201ENST00000215829 PPARAQ07869 468 aa18.91■□□□□ 0.62
SNRPD3-201ENST00000215829 TNIP1Q15025 636 aa18.91■□□□□ 0.62
SNRPD3-201ENST00000215829 TBC1D10CQ8IV04 446 aa18.91■□□□□ 0.62
SNRPD3-201ENST00000215829 MINDY4BA8MYZ0 360 aa18.91■□□□□ 0.62
SNRPD3-201ENST00000215829 USP17L12C9JPN9 530 aa18.91■□□□□ 0.62
SNRPD3-201ENST00000215829 USP17L21D6R901 530 aa18.91■□□□□ 0.62
SNRPD3-201ENST00000215829 FZD9O00144 591 aa18.91■□□□□ 0.62
SNRPD3-201ENST00000215829 SBK1Q52WX2 424 aa18.91■□□□□ 0.62
SNRPD3-201ENST00000215829 DHX32Q7L7V1 743 aaKnown RBP18.91■□□□□ 0.62
SNRPD3-201ENST00000215829 ALDH8A1Q9H2A2 487 aaPredicted RBP18.91■□□□□ 0.62
SNRPD3-201ENST00000215829 CTDSPL2Q05D32 466 aa18.9■□□□□ 0.62
SNRPD3-201ENST00000215829 NCOA7Q8NI08 942 aa18.9■□□□□ 0.62
SNRPD3-201ENST00000215829 USP40Q9NVE5 1235 aa18.9■□□□□ 0.62
SNRPD3-201ENST00000215829 MCM9Q9NXL9 1143 aa18.9■□□□□ 0.62
SNRPD3-201ENST00000215829 ARPP21Q9UBL0 812 aaPredicted RBP18.9■□□□□ 0.62
SNRPD3-201ENST00000215829 ZBTB12Q9Y330 459 aaPredicted RBP18.9■□□□□ 0.62
SNRPD3-201ENST00000215829 CDK5RAP2Q96SN8 1893 aa18.9■□□□□ 0.62
SNRPD3-201ENST00000215829 ADAMTSL1Q8N6G6 1762 aa18.89■□□□□ 0.62
SNRPD3-201ENST00000215829 YBX3P16989 372 aaKnown RBP eCLIP18.89■□□□□ 0.616e-7■■□□□ 13.6
SNRPD3-201ENST00000215829 LMNB1P20700 586 aa18.89■□□□□ 0.61
SNRPD3-201ENST00000215829 RBM5P52756 815 aaKnown RBP eCLIP18.89■□□□□ 0.611e-7■■■■■ 26.9
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms