RNA–Protein interactions for RNA: ENST00000193403.10

ACTN1-201, Transcript of actinin alpha 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ACTN1, Length 3,779 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-201ENST00000193403 KIF28PB7ZC32 967 aa12.8□□□□□ -0.36
ACTN1-201ENST00000193403 M0R2C6 588 aa12.8□□□□□ -0.36
ACTN1-201ENST00000193403 FOXN1O15353 648 aa12.8□□□□□ -0.36
ACTN1-201ENST00000193403 CCDC175P0C221 793 aa12.8□□□□□ -0.36
ACTN1-201ENST00000193403 METTL24Q5JXM2 366 aa12.8□□□□□ -0.36
ACTN1-201ENST00000193403 TOGARAM2Q6ZUX3 1019 aa12.8□□□□□ -0.36
ACTN1-201ENST00000193403 GPIHBP1Q8IV16 184 aa12.8□□□□□ -0.36
ACTN1-201ENST00000193403 ENGASEQ8NFI3 743 aa12.8□□□□□ -0.36
ACTN1-201ENST00000193403 SMARCC2Q8TAQ2 1214 aa12.8□□□□□ -0.36
ACTN1-201ENST00000193403 NUP88Q99567 741 aaPredicted RBP12.8□□□□□ -0.36
ACTN1-201ENST00000193403 PUS3Q9BZE2 481 aaKnown RBP12.8□□□□□ -0.36
ACTN1-201ENST00000193403 KCNJ14Q9UNX9 436 aa12.8□□□□□ -0.36
ACTN1-201ENST00000193403 MED23Q9ULK4 1368 aa12.8□□□□□ -0.36
ACTN1-201ENST00000193403 PTPRUQ92729 1446 aa12.8□□□□□ -0.36
ACTN1-201ENST00000193403 ERICH2A1L162 156 aa12.79□□□□□ -0.36
ACTN1-201ENST00000193403 TRIM66O15016 1216 aa12.79□□□□□ -0.36
ACTN1-201ENST00000193403 YEATS4O95619 227 aa12.79□□□□□ -0.36
ACTN1-201ENST00000193403 IBSPP21815 317 aaPredicted RBP12.79□□□□□ -0.36
ACTN1-201ENST00000193403 ATL3Q6DD88 541 aa12.79□□□□□ -0.36
ACTN1-201ENST00000193403 TRIM22Q8IYM9 498 aa12.79□□□□□ -0.36
ACTN1-201ENST00000193403 NRKQ7Z2Y5 1582 aa12.79□□□□□ -0.36
ACTN1-201ENST00000193403 UBAP1LF5GYI3 381 aa12.79□□□□□ -0.36
ACTN1-201ENST00000193403 GCP02774 474 aa12.79□□□□□ -0.36
ACTN1-201ENST00000193403 FKBP15Q5T1M5 1219 aa12.79□□□□□ -0.36
ACTN1-201ENST00000193403 KCNB2Q92953 911 aa12.79□□□□□ -0.36
ACTN1-201ENST00000193403 CAPZA3Q96KX2 299 aa12.79□□□□□ -0.36
ACTN1-201ENST00000193403 SLC12A7Q9Y666 1083 aa12.79□□□□□ -0.36
ACTN1-201ENST00000193403 MINDY4BA8MYZ0 360 aa12.79□□□□□ -0.36
ACTN1-201ENST00000193403 ZBTB43O43298 467 aa12.79□□□□□ -0.36
ACTN1-201ENST00000193403 PPARDQ03181 441 aa12.79□□□□□ -0.36
ACTN1-201ENST00000193403 MTF1Q14872 753 aa12.79□□□□□ -0.36
ACTN1-201ENST00000193403 CADPS2Q86UW7 1296 aa12.79□□□□□ -0.36
ACTN1-201ENST00000193403 OSBP2Q969R2 916 aa12.79□□□□□ -0.36
ACTN1-201ENST00000193403 IL17RAQ96F46 866 aa12.79□□□□□ -0.36
ACTN1-201ENST00000193403 HELLSQ9NRZ9 838 aa12.79□□□□□ -0.36
ACTN1-201ENST00000193403 DACH1Q9UI36 760 aa12.79□□□□□ -0.36
ACTN1-201ENST00000193403 ANKRD26Q9UPS8 1709 aa12.78□□□□□ -0.36
ACTN1-201ENST00000193403 FGAP02671 866 aa12.78□□□□□ -0.36
ACTN1-201ENST00000193403 SNRPA1P09661 255 aaKnown RBP12.78□□□□□ -0.36
ACTN1-201ENST00000193403 CYP2C19P33261 490 aa12.78□□□□□ -0.36
ACTN1-201ENST00000193403 ANKRD20A12PQ8NF67 263 aa12.78□□□□□ -0.36
ACTN1-201ENST00000193403 AIDAQ96BJ3 306 aa12.78□□□□□ -0.36
ACTN1-201ENST00000193403 hCG_1642624A0A1W2PR95 340 aa12.78□□□□□ -0.36
ACTN1-201ENST00000193403 LONRF2Q1L5Z9 754 aa12.78□□□□□ -0.36
ACTN1-201ENST00000193403 SLC9C2Q5TAH2 1124 aa12.78□□□□□ -0.36
ACTN1-201ENST00000193403 ACBD3Q9H3P7 528 aa12.78□□□□□ -0.36
ACTN1-201ENST00000193403 NPHP4O75161 1426 aaPredicted RBP12.78□□□□□ -0.36
ACTN1-201ENST00000193403 A0A1W2PQ27 194 aa12.78□□□□□ -0.36
ACTN1-201ENST00000193403 A0A1W2PQ64 194 aa12.78□□□□□ -0.36
ACTN1-201ENST00000193403 A0A1W2PQD8 194 aa12.78□□□□□ -0.36
ACTN1-201ENST00000193403 SOWAHDA6NJG2 315 aa12.78□□□□□ -0.36
ACTN1-201ENST00000193403 ADORA1P30542 326 aa12.78□□□□□ -0.36
ACTN1-201ENST00000193403 ZNF274Q96GC6 653 aaPredicted RBP12.78□□□□□ -0.36
ACTN1-201ENST00000193403 MPHOSPH8Q99549 860 aa12.78□□□□□ -0.36
ACTN1-201ENST00000193403 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.78□□□□□ -0.365e-6■■■■■ 34.6
ACTN1-201ENST00000193403 COPRSQ9NQ92 184 aa12.78□□□□□ -0.36
ACTN1-201ENST00000193403 CWC25Q9NXE8 425 aaPredicted RBP12.78□□□□□ -0.36
ACTN1-201ENST00000193403 TBC1D2BQ9UPU7 963 aa12.78□□□□□ -0.36
ACTN1-201ENST00000193403 MAPK8IP1Q9UQF2 711 aa12.78□□□□□ -0.36
ACTN1-201ENST00000193403 TMEM131LA2VDJ0 1609 aa12.78□□□□□ -0.36
ACTN1-201ENST00000193403 GOLGA6L9A6NEM1 432 aa12.77□□□□□ -0.36
ACTN1-201ENST00000193403 GPAA1O43292 621 aa12.77□□□□□ -0.36
ACTN1-201ENST00000193403 TADA3O75528 432 aa12.77□□□□□ -0.36
ACTN1-201ENST00000193403 IPO7O95373 1038 aaKnown RBP12.77□□□□□ -0.36
ACTN1-201ENST00000193403 FDPSP14324 419 aaKnown RBP12.77□□□□□ -0.36
ACTN1-201ENST00000193403 CMA1P23946 247 aa12.77□□□□□ -0.36
ACTN1-201ENST00000193403 CC2D1AQ6P1N0 951 aaPredicted RBP12.77□□□□□ -0.36
ACTN1-201ENST00000193403 IGSF22Q8N9C0 903 aa12.77□□□□□ -0.36
ACTN1-201ENST00000193403 TSPYL1Q9H0U9 437 aa12.77□□□□□ -0.36
ACTN1-201ENST00000193403 SERTAD1Q9UHV2 236 aa12.77□□□□□ -0.36
ACTN1-201ENST00000193403 ADAMTS13Q76LX8 1427 aa12.77□□□□□ -0.37
ACTN1-201ENST00000193403 H2AFXP16104 143 aaPredicted RBP12.77□□□□□ -0.37
ACTN1-201ENST00000193403 ZAP70P43403 619 aa12.77□□□□□ -0.37
ACTN1-201ENST00000193403 TDO2P48775 406 aa12.77□□□□□ -0.37
ACTN1-201ENST00000193403 DNA2P51530 1060 aa12.77□□□□□ -0.37
ACTN1-201ENST00000193403 KIF23Q02241 960 aaPredicted RBP12.77□□□□□ -0.37
ACTN1-201ENST00000193403 SSRP1Q08945 709 aaKnown RBP12.77□□□□□ -0.37
ACTN1-201ENST00000193403 GPR161Q8N6U8 529 aaKnown RBP12.77□□□□□ -0.37
ACTN1-201ENST00000193403 DSCC1Q9BVC3 393 aa12.77□□□□□ -0.37
ACTN1-201ENST00000193403 SAMSN1Q9NSI8 373 aaKnown RBP12.77□□□□□ -0.37
ACTN1-201ENST00000193403 SLAIN2Q9P270 581 aa12.77□□□□□ -0.37
ACTN1-201ENST00000193403 GUCA1BQ9UMX6 200 aa12.77□□□□□ -0.37
ACTN1-201ENST00000193403 USP31Q70CQ4 1352 aa12.77□□□□□ -0.37
ACTN1-201ENST00000193403 N4BP3O15049 544 aa12.77□□□□□ -0.37
ACTN1-201ENST00000193403 IL15P40933 162 aaPredicted RBP12.77□□□□□ -0.37
ACTN1-201ENST00000193403 SPECC1LQ69YQ0 1117 aa12.77□□□□□ -0.37
ACTN1-201ENST00000193403 DHX37Q8IY37 1157 aaKnown RBP12.77□□□□□ -0.37
ACTN1-201ENST00000193403 SMYD4Q8IYR2 804 aaPredicted RBP12.77□□□□□ -0.37
ACTN1-201ENST00000193403 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.77□□□□□ -0.37
ACTN1-201ENST00000193403 DNAJC21Q5F1R6 531 aaKnown RBP12.76□□□□□ -0.37
ACTN1-201ENST00000193403 BICDL1Q6ZP65 573 aa12.76□□□□□ -0.37
ACTN1-201ENST00000193403 NAPBQ9H115 298 aa12.76□□□□□ -0.37
ACTN1-201ENST00000193403 PHLPP2Q6ZVD8 1323 aa12.76□□□□□ -0.37
ACTN1-201ENST00000193403 CTAGE15A4D2H0 777 aa12.76□□□□□ -0.37
ACTN1-201ENST00000193403 AKR1B15C9JRZ8 316 aaPredicted RBP12.76□□□□□ -0.37
ACTN1-201ENST00000193403 CTAGE8P0CG41 777 aa12.76□□□□□ -0.37
ACTN1-201ENST00000193403 CASP1P29466 404 aa12.76□□□□□ -0.37
ACTN1-201ENST00000193403 MATR3P43243 847 aaKnown RBP eCLIP12.76□□□□□ -0.372e-6■■■■□ 22.4
ACTN1-201ENST00000193403 CTAGE6Q86UF2 777 aa12.76□□□□□ -0.37
ACTN1-201ENST00000193403 VSTM4Q8IW00 320 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms