RNA–Protein interactions for RNA: ENST00000066544.7

CDC27-201, Transcript of cell division cycle 27, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDC27, Length 5,801 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-201ENST00000066544 TMX1Q9H3N1 280 aa9.59□□□□□ -0.87
CDC27-201ENST00000066544 POLR3EQ9NVU0 708 aa9.59□□□□□ -0.87
CDC27-201ENST00000066544 ABCF2Q9UG63 623 aa9.59□□□□□ -0.87
CDC27-201ENST00000066544 SERPINC1P01008 464 aa9.59□□□□□ -0.87
CDC27-201ENST00000066544 CSF1RP07333 972 aa9.59□□□□□ -0.87
CDC27-201ENST00000066544 ATL3Q6DD88 541 aa9.59□□□□□ -0.87
CDC27-201ENST00000066544 DZIP3Q86Y13 1208 aaKnown RBP9.59□□□□□ -0.87
CDC27-201ENST00000066544 MPHOSPH8Q99549 860 aa9.59□□□□□ -0.87
CDC27-201ENST00000066544 MINDY4BA8MYZ0 360 aa9.59□□□□□ -0.87
CDC27-201ENST00000066544 BTBD18B2RXH4 712 aa9.59□□□□□ -0.87
CDC27-201ENST00000066544 SFPQP23246 707 aaKnown RBP eCLIP9.59□□□□□ -0.87
CDC27-201ENST00000066544 ZNF827Q17R98 1081 aa9.59□□□□□ -0.87
CDC27-201ENST00000066544 CFAP100Q494V2 611 aa9.59□□□□□ -0.87
CDC27-201ENST00000066544 NBPF11Q86T75 865 aa9.59□□□□□ -0.87
CDC27-201ENST00000066544 HOMER1Q86YM7 354 aa9.59□□□□□ -0.87
CDC27-201ENST00000066544 A0A1W2PQ27 194 aa9.58□□□□□ -0.88
CDC27-201ENST00000066544 A0A1W2PQ64 194 aa9.58□□□□□ -0.88
CDC27-201ENST00000066544 A0A1W2PQD8 194 aa9.58□□□□□ -0.88
CDC27-201ENST00000066544 GUCY1A2P33402 732 aa9.58□□□□□ -0.88
CDC27-201ENST00000066544 BRAPQ7Z569 592 aa9.58□□□□□ -0.88
CDC27-201ENST00000066544 DPF2Q92785 391 aa9.58□□□□□ -0.88
CDC27-201ENST00000066544 ACSBG1Q96GR2 724 aa9.58□□□□□ -0.88
CDC27-201ENST00000066544 ZSWIM5Q9P217 1185 aa9.58□□□□□ -0.88
CDC27-201ENST00000066544 SLC12A7Q9Y666 1083 aa9.58□□□□□ -0.88
CDC27-201ENST00000066544 SH2B2O14492 632 aaPredicted RBP9.58□□□□□ -0.88
CDC27-201ENST00000066544 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.58□□□□□ -0.88
CDC27-201ENST00000066544 ADAMTS7Q9UKP4 1686 aa9.58□□□□□ -0.88
CDC27-201ENST00000066544 RANBP6O60518 1105 aaKnown RBP9.58□□□□□ -0.88
CDC27-201ENST00000066544 BCAMP50895 628 aa9.58□□□□□ -0.88
CDC27-201ENST00000066544 EVCP57679 992 aa9.58□□□□□ -0.88
CDC27-201ENST00000066544 NKX1-1Q15270 411 aaPredicted RBP9.58□□□□□ -0.88
CDC27-201ENST00000066544 SHC4Q6S5L8 630 aa9.58□□□□□ -0.88
CDC27-201ENST00000066544 CCAR2Q8N163 923 aaKnown RBP9.58□□□□□ -0.88
CDC27-201ENST00000066544 CPDO75976 1380 aa9.58□□□□□ -0.88
CDC27-201ENST00000066544 LAMA4Q16363 1823 aa9.58□□□□□ -0.88
CDC27-201ENST00000066544 ALS2Q96Q42 1657 aa9.58□□□□□ -0.88
CDC27-201ENST00000066544 GRIN1Q05586 938 aa9.58□□□□□ -0.88
CDC27-201ENST00000066544 SLC39A14Q15043 492 aa9.58□□□□□ -0.88
CDC27-201ENST00000066544 GRAMD1CQ8IYS0 662 aa9.58□□□□□ -0.88
CDC27-201ENST00000066544 STRBPQ96SI9 672 aaKnown RBP9.58□□□□□ -0.88
CDC27-201ENST00000066544 WTIPA6NIX2 430 aaPredicted RBP9.57□□□□□ -0.88
CDC27-201ENST00000066544 TPM4P67936 248 aa9.57□□□□□ -0.88
CDC27-201ENST00000066544 FANCCQ00597 558 aa9.57□□□□□ -0.88
CDC27-201ENST00000066544 TRIM28Q13263 835 aaKnown RBP9.57□□□□□ -0.88
CDC27-201ENST00000066544 RASGRF1Q13972 1273 aa9.57□□□□□ -0.88
CDC27-201ENST00000066544 ARMCX5Q6P1M9 558 aa9.57□□□□□ -0.88
CDC27-201ENST00000066544 SYT10Q6XYQ8 523 aa9.57□□□□□ -0.88
CDC27-201ENST00000066544 EPB41L4AQ9HCS5 686 aaPredicted RBP9.57□□□□□ -0.88
CDC27-201ENST00000066544 IFNL3Q8IZI9 196 aa9.57□□□□□ -0.88
CDC27-201ENST00000066544 CNNM3Q8NE01 707 aa9.57□□□□□ -0.88
CDC27-201ENST00000066544 RIC1Q4ADV7 1423 aa9.57□□□□□ -0.88
CDC27-201ENST00000066544 ZMYM6O95789 1325 aa9.57□□□□□ -0.88
CDC27-201ENST00000066544 ZNF335Q9H4Z2 1342 aaPredicted RBP9.57□□□□□ -0.88
CDC27-201ENST00000066544 BAZ2BQ9UIF8 2168 aaKnown RBP9.57□□□□□ -0.88
CDC27-201ENST00000066544 CMA1P23946 247 aa9.57□□□□□ -0.88
CDC27-201ENST00000066544 CDC25BP30305 580 aa9.57□□□□□ -0.88
CDC27-201ENST00000066544 NLRP12P59046 1061 aa9.57□□□□□ -0.88
CDC27-201ENST00000066544 LONRF3Q496Y0 759 aa9.57□□□□□ -0.88
CDC27-201ENST00000066544 LRP2BPQ9P2M1 347 aa9.57□□□□□ -0.88
CDC27-201ENST00000066544 CTIFO43310 598 aaKnown RBP9.57□□□□□ -0.88
CDC27-201ENST00000066544 NR5A1Q13285 461 aa9.57□□□□□ -0.88
CDC27-201ENST00000066544 ELF2Q15723 593 aa9.57□□□□□ -0.88
CDC27-201ENST00000066544 TRMT44Q8IYL2 757 aaKnown RBP9.57□□□□□ -0.88
CDC27-201ENST00000066544 PRDM1O75626 825 aa9.57□□□□□ -0.88
CDC27-201ENST00000066544 SPATA5Q8NB90 893 aa9.57□□□□□ -0.88
CDC27-201ENST00000066544 PCDHA5Q9Y5H7 936 aa9.57□□□□□ -0.88
CDC27-201ENST00000066544 TACC3Q9Y6A5 838 aa9.57□□□□□ -0.88
CDC27-201ENST00000066544 SLC4A4Q9Y6R1 1079 aa9.57□□□□□ -0.88
CDC27-201ENST00000066544 UBASH3AP57075 661 aa9.56□□□□□ -0.88
CDC27-201ENST00000066544 SLC4A8Q2Y0W8 1093 aa9.56□□□□□ -0.88
CDC27-201ENST00000066544 KLHL34Q8N239 644 aa9.56□□□□□ -0.88
CDC27-201ENST00000066544 LCORLQ8N3X6 602 aa9.56□□□□□ -0.88
CDC27-201ENST00000066544 KIF18AQ8NI77 898 aa9.56□□□□□ -0.88
CDC27-201ENST00000066544 SDR42E1Q8WUS8 393 aa9.56□□□□□ -0.88
CDC27-201ENST00000066544 PAXBP1Q9Y5B6 917 aa9.56□□□□□ -0.88
CDC27-201ENST00000066544 COL5A2P05997 1499 aaPredicted RBP9.56□□□□□ -0.88
CDC27-201ENST00000066544 UBN2Q6ZU65 1347 aa9.56□□□□□ -0.88
CDC27-201ENST00000066544 COL18A1P39060 1754 aa9.56□□□□□ -0.88
CDC27-201ENST00000066544 TMEM232C9JQI7 657 aa9.56□□□□□ -0.88
CDC27-201ENST00000066544 PDE8AO60658 829 aa9.56□□□□□ -0.88
CDC27-201ENST00000066544 CDKL5O76039 1030 aa9.56□□□□□ -0.88
CDC27-201ENST00000066544 MAP3K12Q12852 859 aa9.56□□□□□ -0.88
CDC27-201ENST00000066544 TTF1Q15361 905 aaPredicted RBP9.56□□□□□ -0.88
CDC27-201ENST00000066544 E4F1Q66K89 784 aaPredicted RBP9.56□□□□□ -0.88
CDC27-201ENST00000066544 DIS3L2Q8IYB7 885 aaKnown RBP9.56□□□□□ -0.88
CDC27-201ENST00000066544 ANKRD7Q92527 254 aa9.56□□□□□ -0.88
CDC27-201ENST00000066544 FANCLQ9NW38 375 aa9.56□□□□□ -0.88
CDC27-201ENST00000066544 CYP19A1P11511 503 aaPredicted RBP9.56□□□□□ -0.88
CDC27-201ENST00000066544 SSRP1Q08945 709 aaKnown RBP9.56□□□□□ -0.88
CDC27-201ENST00000066544 NCAPHQ15003 741 aa9.56□□□□□ -0.88
CDC27-201ENST00000066544 MFSD6Q6ZSS7 791 aa9.56□□□□□ -0.88
CDC27-201ENST00000066544 TEX13AQ9BXU3 409 aaPredicted RBP9.56□□□□□ -0.88
CDC27-201ENST00000066544 LY9Q9HBG7 655 aa9.56□□□□□ -0.88
CDC27-201ENST00000066544 KIF1AQ12756 1690 aa9.56□□□□□ -0.88
CDC27-201ENST00000066544 NEMFO60524 1076 aa9.56□□□□□ -0.88
CDC27-201ENST00000066544 IGDCC4Q8TDY8 1250 aa9.56□□□□□ -0.88
CDC27-201ENST00000066544 FAM217BQ9NTX9 383 aaPredicted RBP9.56□□□□□ -0.88
CDC27-201ENST00000066544 KCPQ6ZWJ8 1503 aa9.55□□□□□ -0.88
CDC27-201ENST00000066544 UBE3CQ15386 1083 aa9.55□□□□□ -0.88
CDC27-201ENST00000066544 PUM3Q15397 648 aaKnown RBP9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms