RNA–Protein interactions for RNA: ENST00000035307.6

CHPF2-201, Transcript of chondroitin polymerizing factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF2, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-201ENST00000035307 TMC6Q7Z403 805 aa13.94□□□□□ -0.18
CHPF2-201ENST00000035307 IQCA1Q86XH1 822 aa13.94□□□□□ -0.18
CHPF2-201ENST00000035307 TGFBRAP1Q8WUH2 860 aa13.94□□□□□ -0.18
CHPF2-201ENST00000035307 SCAF8Q9UPN6 1271 aaKnown RBP13.94□□□□□ -0.18
CHPF2-201ENST00000035307 RPS6KB1P23443 525 aa13.94□□□□□ -0.18
CHPF2-201ENST00000035307 KLRK1P26718 216 aa13.94□□□□□ -0.18
CHPF2-201ENST00000035307 MFSD14BQ5SR56 506 aa13.94□□□□□ -0.18
CHPF2-201ENST00000035307 DDX19AQ9NUU7 478 aaKnown RBP13.94□□□□□ -0.18
CHPF2-201ENST00000035307 SPDYE4A6NLX3 237 aa13.93□□□□□ -0.18
CHPF2-201ENST00000035307 E7EWF7 191 aa13.93□□□□□ -0.18
CHPF2-201ENST00000035307 CYP2E1P05181 493 aaPredicted RBP13.93□□□□□ -0.18
CHPF2-201ENST00000035307 PRDX5P30044 214 aa13.93□□□□□ -0.18
CHPF2-201ENST00000035307 DHX32Q7L7V1 743 aaKnown RBP13.93□□□□□ -0.18
CHPF2-201ENST00000035307 AOPEPQ8N6M6 819 aa13.93□□□□□ -0.18
CHPF2-201ENST00000035307 CRNKL1Q9BZJ0 848 aaKnown RBP13.93□□□□□ -0.18
CHPF2-201ENST00000035307 ZKSCAN5Q9Y2L8 839 aa13.93□□□□□ -0.18
CHPF2-201ENST00000035307 ADAMTSL3P82987 1691 aa13.93□□□□□ -0.18
CHPF2-201ENST00000035307 ERVV-1B6SEH8 477 aa13.93□□□□□ -0.18
CHPF2-201ENST00000035307 MTX1Q13505 466 aa13.93□□□□□ -0.18
CHPF2-201ENST00000035307 WTAPQ15007 396 aa13.93□□□□□ -0.18
CHPF2-201ENST00000035307 SPECC1Q5M775 1068 aa13.93□□□□□ -0.18
CHPF2-201ENST00000035307 ZNF804AQ7Z570 1209 aa13.93□□□□□ -0.18
CHPF2-201ENST00000035307 CNNM3Q8NE01 707 aa13.93□□□□□ -0.18
CHPF2-201ENST00000035307 NARFQ9UHQ1 456 aa13.93□□□□□ -0.18
CHPF2-201ENST00000035307 IPO7O95373 1038 aaKnown RBP13.93□□□□□ -0.18
CHPF2-201ENST00000035307 TNNT1P13805 278 aa13.93□□□□□ -0.18
CHPF2-201ENST00000035307 RBM17Q96I25 401 aaKnown RBP13.93□□□□□ -0.18
CHPF2-201ENST00000035307 GJB4Q9NTQ9 266 aa13.93□□□□□ -0.18
CHPF2-201ENST00000035307 ANO10Q9NW15 660 aa13.93□□□□□ -0.18
CHPF2-201ENST00000035307 MROH5Q6ZUA9 1318 aa13.93□□□□□ -0.18
CHPF2-201ENST00000035307 CHRNA5P30532 468 aa13.92□□□□□ -0.18
CHPF2-201ENST00000035307 CACNB3P54284 484 aa13.92□□□□□ -0.18
CHPF2-201ENST00000035307 ZNF772Q68DY9 489 aaPredicted RBP13.92□□□□□ -0.18
CHPF2-201ENST00000035307 SLC51AQ86UW1 340 aa13.92□□□□□ -0.18
CHPF2-201ENST00000035307 C2CD5Q86YS7 1000 aa13.92□□□□□ -0.18
CHPF2-201ENST00000035307 KIF2CQ99661 725 aa13.92□□□□□ -0.18
CHPF2-201ENST00000035307 ZMYND15Q9H091 742 aa13.92□□□□□ -0.18
CHPF2-201ENST00000035307 GJA3Q9Y6H8 435 aa13.92□□□□□ -0.18
CHPF2-201ENST00000035307 ZNF804BA4D1E1 1349 aa13.92□□□□□ -0.18
CHPF2-201ENST00000035307 ZBTB43O43298 467 aa13.92□□□□□ -0.18
CHPF2-201ENST00000035307 LIG1P18858 919 aa13.92□□□□□ -0.18
CHPF2-201ENST00000035307 PRKG1Q13976 671 aa13.92□□□□□ -0.18
CHPF2-201ENST00000035307 CCDC96Q2M329 555 aa13.92□□□□□ -0.18
CHPF2-201ENST00000035307 ADGRB2O60241 1585 aa13.92□□□□□ -0.18
CHPF2-201ENST00000035307 SFPQP23246 707 aaKnown RBP eCLIP13.92□□□□□ -0.18
CHPF2-201ENST00000035307 MINPP1Q9UNW1 487 aa13.92□□□□□ -0.18
CHPF2-201ENST00000035307 H0YIN7 160 aa13.91□□□□□ -0.18
CHPF2-201ENST00000035307 ADD1P35611 737 aaKnown RBP13.91□□□□□ -0.18
CHPF2-201ENST00000035307 AFMP43652 599 aa13.91□□□□□ -0.18
CHPF2-201ENST00000035307 RFX5P48382 616 aaPredicted RBP13.91□□□□□ -0.18
CHPF2-201ENST00000035307 RBM6P78332 1123 aaKnown RBP13.91□□□□□ -0.18
CHPF2-201ENST00000035307 LCORLQ8N3X6 602 aa13.91□□□□□ -0.18
CHPF2-201ENST00000035307 BAG3O95817 575 aa13.91□□□□□ -0.18
CHPF2-201ENST00000035307 NOLC1Q14978 699 aaKnown RBP eCLIP13.91□□□□□ -0.182e-6■■□□□ 11.8
CHPF2-201ENST00000035307 TEX11Q8IYF3 940 aa13.91□□□□□ -0.18
CHPF2-201ENST00000035307 FTOQ9C0B1 505 aaKnown RBP eCLIP13.91□□□□□ -0.18
CHPF2-201ENST00000035307 BCS1LQ9Y276 419 aa13.91□□□□□ -0.18
CHPF2-201ENST00000035307 ZSWIM4Q9H7M6 989 aa13.91□□□□□ -0.18
CHPF2-201ENST00000035307 FMN2Q9NZ56 1722 aa13.91□□□□□ -0.18
CHPF2-201ENST00000035307 SSRP1Q08945 709 aaKnown RBP13.9□□□□□ -0.18
CHPF2-201ENST00000035307 ZYXQ15942 572 aaKnown RBP13.9□□□□□ -0.18
CHPF2-201ENST00000035307 FAM200AQ8TCP9 573 aa13.9□□□□□ -0.18
CHPF2-201ENST00000035307 ANKRD2Q9GZV1 360 aa13.9□□□□□ -0.18
CHPF2-201ENST00000035307 CTCFLQ8NI51 663 aaPredicted RBP13.9□□□□□ -0.18
CHPF2-201ENST00000035307 A0A0U1RQG5 324 aaPredicted RBP13.9□□□□□ -0.18
CHPF2-201ENST00000035307 TSPY3P0CV98 308 aa13.9□□□□□ -0.18
CHPF2-201ENST00000035307 TSPY8P0CW00 308 aa13.9□□□□□ -0.18
CHPF2-201ENST00000035307 BAG6P46379 1132 aa13.9□□□□□ -0.18
CHPF2-201ENST00000035307 IFIT1BQ5T764 474 aaKnown RBP13.9□□□□□ -0.18
CHPF2-201ENST00000035307 MXD3Q9BW11 206 aa13.9□□□□□ -0.18
CHPF2-201ENST00000035307 HELLSQ9NRZ9 838 aa13.9□□□□□ -0.18
CHPF2-201ENST00000035307 DENND2AQ9ULE3 1009 aa13.9□□□□□ -0.18
CHPF2-201ENST00000035307 CTDP1Q9Y5B0 961 aaPredicted RBP13.9□□□□□ -0.18
CHPF2-201ENST00000035307 MON2Q7Z3U7 1717 aa13.9□□□□□ -0.19
CHPF2-201ENST00000035307 IGSF3O75054 1194 aa13.9□□□□□ -0.19
CHPF2-201ENST00000035307 PTPN14Q15678 1187 aa13.9□□□□□ -0.19
CHPF2-201ENST00000035307 MAP4K1Q92918 833 aa13.89□□□□□ -0.19
CHPF2-201ENST00000035307 CHD2O14647 1828 aaKnown RBP13.89□□□□□ -0.19
CHPF2-201ENST00000035307 EZH2Q15910 746 aaKnown RBP13.89□□□□□ -0.19
CHPF2-201ENST00000035307 ZNF34Q8IZ26 560 aa13.89□□□□□ -0.19
CHPF2-201ENST00000035307 TTF2Q9UNY4 1162 aaKnown RBP13.89□□□□□ -0.19
CHPF2-201ENST00000035307 RIPOR2Q9Y4F9 1068 aa13.89□□□□□ -0.19
CHPF2-201ENST00000035307 RABL6Q3YEC7 729 aaPredicted RBP13.89□□□□□ -0.19
CHPF2-201ENST00000035307 IFNL3Q8IZI9 196 aa13.89□□□□□ -0.19
CHPF2-201ENST00000035307 NFAT5O94916 1531 aa13.88□□□□□ -0.19
CHPF2-201ENST00000035307 C21orf2O43822 256 aa13.88□□□□□ -0.19
CHPF2-201ENST00000035307 SYKP43405 635 aa13.88□□□□□ -0.19
CHPF2-201ENST00000035307 CATIPQ7Z7H3 387 aa13.88□□□□□ -0.19
CHPF2-201ENST00000035307 TTC6Q86TZ1 520 aa13.88□□□□□ -0.19
CHPF2-201ENST00000035307 LARGE2Q8N3Y3 721 aa13.88□□□□□ -0.19
CHPF2-201ENST00000035307 LRRC4BQ9NT99 713 aa13.88□□□□□ -0.19
CHPF2-201ENST00000035307 MTMR6Q9Y217 621 aa13.88□□□□□ -0.19
CHPF2-201ENST00000035307 MED1Q15648 1581 aaPredicted RBP13.88□□□□□ -0.19
CHPF2-201ENST00000035307 RAD17O75943 681 aa13.88□□□□□ -0.19
CHPF2-201ENST00000035307 URI1O94763 535 aaPredicted RBP13.88□□□□□ -0.19
CHPF2-201ENST00000035307 ENOX2Q16206 610 aaKnown RBP13.88□□□□□ -0.19
CHPF2-201ENST00000035307 BARGINQ6ZT62 677 aa13.88□□□□□ -0.19
CHPF2-201ENST00000035307 CCDC47Q96A33 483 aaKnown RBP13.88□□□□□ -0.19
CHPF2-201ENST00000035307 AOX1Q06278 1338 aa13.88□□□□□ -0.19
CHPF2-201ENST00000035307 LDHCP07864 332 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms