RNA–Protein interactions for RNA: ENSMUST00000095476.5

Lig4-201, Transcript of DNA ligase 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Lig4, Length 5,028 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig4-201ENSMUST00000095476 Suds3Q8BR65 328 aa11.47□□□□□ -0.57
Lig4-201ENSMUST00000095476 Gle1Q8R322 699 aa11.47□□□□□ -0.57
Lig4-201ENSMUST00000095476 Spats2lQ91WJ7 558 aaKnown RBP11.47□□□□□ -0.57
Lig4-201ENSMUST00000095476 JmyQ9QXM1 983 aa11.47□□□□□ -0.57
Lig4-201ENSMUST00000095476 Atp10dQ8K2X1 1416 aa11.47□□□□□ -0.57
Lig4-201ENSMUST00000095476 Fam207aP58468 219 aaKnown RBP11.47□□□□□ -0.57
Lig4-201ENSMUST00000095476 Cnnm2Q3TWN3 875 aa11.47□□□□□ -0.57
Lig4-201ENSMUST00000095476 Aifm3Q3TY86 605 aa11.47□□□□□ -0.57
Lig4-201ENSMUST00000095476 Rdm1Q9CQK3 281 aa11.47□□□□□ -0.57
Lig4-201ENSMUST00000095476 KynuQ9CXF0 464 aa11.47□□□□□ -0.57
Lig4-201ENSMUST00000095476 Krt71Q9R0H5 524 aa11.47□□□□□ -0.57
Lig4-201ENSMUST00000095476 Magi3Q9EQJ9 1476 aa11.46□□□□□ -0.57
Lig4-201ENSMUST00000095476 Cnbd1B1AWM0 430 aa11.46□□□□□ -0.57
Lig4-201ENSMUST00000095476 LnpkQ7TQ95 425 aa11.46□□□□□ -0.57
Lig4-201ENSMUST00000095476 Afap1Q80YS6 731 aa11.46□□□□□ -0.57
Lig4-201ENSMUST00000095476 Clip2Q9Z0H8 1047 aa11.46□□□□□ -0.57
Lig4-201ENSMUST00000095476 Grm8P47743 908 aa11.46□□□□□ -0.57
Lig4-201ENSMUST00000095476 Pfkfb1P70266 471 aa11.46□□□□□ -0.57
Lig4-201ENSMUST00000095476 Haus2Q9CQS9 234 aa11.46□□□□□ -0.57
Lig4-201ENSMUST00000095476 Efhd1Q9D4J1 240 aa11.46□□□□□ -0.57
Lig4-201ENSMUST00000095476 Ccdc97Q9DBT3 340 aa11.46□□□□□ -0.57
Lig4-201ENSMUST00000095476 Pet2A2AHY8 747 aa11.46□□□□□ -0.58
Lig4-201ENSMUST00000095476 Ccdc170D3YXL0 722 aa11.46□□□□□ -0.58
Lig4-201ENSMUST00000095476 Pak1O88643 545 aa11.46□□□□□ -0.58
Lig4-201ENSMUST00000095476 KaznQ69ZS8 779 aa11.46□□□□□ -0.58
Lig4-201ENSMUST00000095476 Ccdc7Q9D541 371 aa11.46□□□□□ -0.58
Lig4-201ENSMUST00000095476 Pdcd6ipQ9WU78 869 aaKnown RBP11.46□□□□□ -0.58
Lig4-201ENSMUST00000095476 Gpatch8A2A6A1 1505 aa11.46□□□□□ -0.58
Lig4-201ENSMUST00000095476 Sh2d4bA6X942 431 aa11.46□□□□□ -0.58
Lig4-201ENSMUST00000095476 Gpr161B2RPY5 545 aa11.46□□□□□ -0.58
Lig4-201ENSMUST00000095476 Camk4P08414 469 aa11.46□□□□□ -0.58
Lig4-201ENSMUST00000095476 Ctnna1P26231 906 aaKnown RBP11.46□□□□□ -0.58
Lig4-201ENSMUST00000095476 Kank4Q6P9J5 1016 aa11.46□□□□□ -0.58
Lig4-201ENSMUST00000095476 Zfp113Q8C689 439 aa11.46□□□□□ -0.58
Lig4-201ENSMUST00000095476 Q8CEZ4 452 aa11.46□□□□□ -0.58
Lig4-201ENSMUST00000095476 Rtn1Q8K0T0 780 aa11.46□□□□□ -0.58
Lig4-201ENSMUST00000095476 MarcksP26645 309 aaKnown RBP11.45□□□□□ -0.58
Lig4-201ENSMUST00000095476 Cd22P35329 862 aa11.45□□□□□ -0.58
Lig4-201ENSMUST00000095476 Klhl7Q8BUL5 586 aa11.45□□□□□ -0.58
Lig4-201ENSMUST00000095476 Triml1Q8BVP1 470 aa11.45□□□□□ -0.58
Lig4-201ENSMUST00000095476 Stag1Q9D3E6 1258 aa11.45□□□□□ -0.58
Lig4-201ENSMUST00000095476 SufuQ9Z0P7 484 aa11.45□□□□□ -0.58
Lig4-201ENSMUST00000095476 BC005561E9Q5E2 1589 aa11.45□□□□□ -0.58
Lig4-201ENSMUST00000095476 Ctnna2Q61301 953 aa11.45□□□□□ -0.58
Lig4-201ENSMUST00000095476 Ccne1Q61457 408 aa11.45□□□□□ -0.58
Lig4-201ENSMUST00000095476 Cep128Q8BI22 1102 aa11.45□□□□□ -0.58
Lig4-201ENSMUST00000095476 D130040H23RikQ8BII3 405 aa11.45□□□□□ -0.58
Lig4-201ENSMUST00000095476 Stx17Q9D0I4 301 aa11.45□□□□□ -0.58
Lig4-201ENSMUST00000095476 Pik3ap1Q9EQ32 811 aa11.45□□□□□ -0.58
Lig4-201ENSMUST00000095476 ErmapQ9JLN5 566 aa11.45□□□□□ -0.58
Lig4-201ENSMUST00000095476 WizO88286 1684 aaKnown RBP11.45□□□□□ -0.58
Lig4-201ENSMUST00000095476 RpsaP14206 295 aaKnown RBP11.45□□□□□ -0.58
Lig4-201ENSMUST00000095476 SkiQ60698 725 aa11.45□□□□□ -0.58
Lig4-201ENSMUST00000095476 Fam133bQ9CVI2 245 aaKnown RBP11.45□□□□□ -0.58
Lig4-201ENSMUST00000095476 Arid5bQ8BM75 1188 aaKnown RBP11.45□□□□□ -0.58
Lig4-201ENSMUST00000095476 Arhgap18Q8K0Q5 663 aa11.45□□□□□ -0.58
Lig4-201ENSMUST00000095476 Nek9Q8K1R7 984 aa11.45□□□□□ -0.58
Lig4-201ENSMUST00000095476 Cep83Q9D5R3 692 aa11.45□□□□□ -0.58
Lig4-201ENSMUST00000095476 Senp1P59110 640 aa11.44□□□□□ -0.58
Lig4-201ENSMUST00000095476 Gm5935Q497S0 212 aa11.44□□□□□ -0.58
Lig4-201ENSMUST00000095476 Ppp4r3aQ6P2K6 820 aa11.44□□□□□ -0.58
Lig4-201ENSMUST00000095476 Nek5Q7TSC3 627 aa11.44□□□□□ -0.58
Lig4-201ENSMUST00000095476 IkQ9Z1M8 557 aaKnown RBP11.44□□□□□ -0.58
Lig4-201ENSMUST00000095476 RcvrnP34057 202 aa11.44□□□□□ -0.58
Lig4-201ENSMUST00000095476 IntuQ059U7 942 aa11.44□□□□□ -0.58
Lig4-201ENSMUST00000095476 Tcerg1lQ3B807 590 aa11.44□□□□□ -0.58
Lig4-201ENSMUST00000095476 Ifit1Q64282 463 aa11.44□□□□□ -0.58
Lig4-201ENSMUST00000095476 Sf3a3Q9D554 501 aaKnown RBP11.44□□□□□ -0.58
Lig4-201ENSMUST00000095476 Plagl1Q9JLQ4 704 aa11.44□□□□□ -0.58
Lig4-201ENSMUST00000095476 Slc1a4O35874 532 aa11.44□□□□□ -0.58
Lig4-201ENSMUST00000095476 Tcp1P11983 556 aaKnown RBP11.44□□□□□ -0.58
Lig4-201ENSMUST00000095476 Cct6aP80317 531 aaKnown RBP11.44□□□□□ -0.58
Lig4-201ENSMUST00000095476 TchpQ3TVW5 497 aa11.44□□□□□ -0.58
Lig4-201ENSMUST00000095476 Rint1Q8BZ36 792 aa11.44□□□□□ -0.58
Lig4-201ENSMUST00000095476 4930449I24RikQ9D5E3 319 aa11.44□□□□□ -0.58
Lig4-201ENSMUST00000095476 Kdm3aQ6PCM1 1323 aa11.44□□□□□ -0.58
Lig4-201ENSMUST00000095476 RilpQ5ND29 369 aa11.44□□□□□ -0.58
Lig4-201ENSMUST00000095476 Ovgp1Q62010 721 aa11.44□□□□□ -0.58
Lig4-201ENSMUST00000095476 Cnot10Q8BH15 744 aa11.44□□□□□ -0.58
Lig4-201ENSMUST00000095476 Ranbp6Q8BIV3 1105 aa11.44□□□□□ -0.58
Lig4-201ENSMUST00000095476 Apol7aB2RT54 418 aa11.43□□□□□ -0.58
Lig4-201ENSMUST00000095476 Sh3d21Q7TSG5 549 aa11.43□□□□□ -0.58
Lig4-201ENSMUST00000095476 Cdca7lQ922M5 438 aa11.43□□□□□ -0.58
Lig4-201ENSMUST00000095476 Cfap57Q9D180 1249 aa11.43□□□□□ -0.58
Lig4-201ENSMUST00000095476 Tpcn1Q9EQJ0 817 aa11.43□□□□□ -0.58
Lig4-201ENSMUST00000095476 AdnpQ9Z103 1108 aaKnown RBP11.43□□□□□ -0.58
Lig4-201ENSMUST00000095476 Zbtb12Q9Z150 459 aa11.43□□□□□ -0.58
Lig4-201ENSMUST00000095476 Lrrc9Q8CDN9 1456 aa11.43□□□□□ -0.58
Lig4-201ENSMUST00000095476 Eef2P58252 858 aaKnown RBP11.43□□□□□ -0.58
Lig4-201ENSMUST00000095476 Ccdc110Q3V125 848 aa11.43□□□□□ -0.58
Lig4-201ENSMUST00000095476 Mtus1Q5HZI1 1210 aa11.43□□□□□ -0.58
Lig4-201ENSMUST00000095476 Anks6Q6GQX6 883 aa11.43□□□□□ -0.58
Lig4-201ENSMUST00000095476 Fam228aQ8CDW1 299 aa11.43□□□□□ -0.58
Lig4-201ENSMUST00000095476 Dtnbp1Q91WZ8 352 aa11.43□□□□□ -0.58
Lig4-201ENSMUST00000095476 Basp1Q91XV3 226 aa11.43□□□□□ -0.58
Lig4-201ENSMUST00000095476 Lmbr1lQ9D1E5 489 aa11.43□□□□□ -0.58
Lig4-201ENSMUST00000095476 Gm29094F6Q785 221 aa11.43□□□□□ -0.58
Lig4-201ENSMUST00000095476 Gm5862K7N5V5 267 aa11.43□□□□□ -0.58
Lig4-201ENSMUST00000095476 Gm10220K7N660 267 aa11.43□□□□□ -0.58
Lig4-201ENSMUST00000095476 Ggt6Q6PDE7 497 aa11.43□□□□□ -0.58
Retrieved 100 of 22,080 RNA–protein pairs in 23.6 ms