RNA–Protein interactions for RNA: ENSMUST00000070487.11

Cpsf4-201, Transcript of Cleavage and polyadenylation specificity factor subunit 4, mousemouse

TSL 1 (best) BASIC

Gene Cpsf4, Length 1,606 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4-201ENSMUST00000070487 Cyp2d10P24456 504 aa29.55■■■□□ 2.32
Cpsf4-201ENSMUST00000070487 Ankrd13cQ3UX43 541 aa29.55■■■□□ 2.32
Cpsf4-201ENSMUST00000070487 RubcnQ80U62 956 aa29.55■■■□□ 2.32
Cpsf4-201ENSMUST00000070487 KnstrnQ9D9Z1 312 aaKnown RBP29.55■■■□□ 2.32
Cpsf4-201ENSMUST00000070487 Tmod2Q9JKK7 351 aa29.55■■■□□ 2.32
Cpsf4-201ENSMUST00000070487 Myh6Q02566 1938 aaKnown RBP29.54■■■□□ 2.32
Cpsf4-201ENSMUST00000070487 Pcdhb9E9Q5G2 828 aa29.54■■■□□ 2.32
Cpsf4-201ENSMUST00000070487 Cyp2d9P11714 504 aa29.54■■■□□ 2.32
Cpsf4-201ENSMUST00000070487 PaoxQ8C0L6 504 aa29.54■■■□□ 2.32
Cpsf4-201ENSMUST00000070487 Clrn2B2RVW2 232 aa29.53■■■□□ 2.32
Cpsf4-201ENSMUST00000070487 CalcaP70160 136 aa29.53■■■□□ 2.32
Cpsf4-201ENSMUST00000070487 Ccdc148Q6P5U8 527 aa29.53■■■□□ 2.32
Cpsf4-201ENSMUST00000070487 Erc1Q99MI1 1120 aa29.53■■■□□ 2.32
Cpsf4-201ENSMUST00000070487 Pold4Q9CWP8 107 aa29.53■■■□□ 2.32
Cpsf4-201ENSMUST00000070487 L1camP11627 1260 aa29.53■■■□□ 2.32
Cpsf4-201ENSMUST00000070487 Tex2Q6ZPJ0 1128 aaKnown RBP29.53■■■□□ 2.32
Cpsf4-201ENSMUST00000070487 Add2Q9QYB8 725 aa29.53■■■□□ 2.32
Cpsf4-201ENSMUST00000070487 VegfbP49766 207 aa29.52■■■□□ 2.32
Cpsf4-201ENSMUST00000070487 Klhdc9Q3USL1 350 aa29.52■■■□□ 2.32
Cpsf4-201ENSMUST00000070487 Ncbp1Q3UYV9 790 aaKnown RBP29.52■■■□□ 2.32
Cpsf4-201ENSMUST00000070487 Trmt2aQ8BNV1 574 aaKnown RBP29.52■■■□□ 2.32
Cpsf4-201ENSMUST00000070487 Bcorl1A2AQH4 1781 aa29.52■■■□□ 2.32
Cpsf4-201ENSMUST00000070487 Gm11437Q5QR91 290 aa29.51■■■□□ 2.31
Cpsf4-201ENSMUST00000070487 Mapk4Q6P5G0 583 aa29.51■■■□□ 2.31
Cpsf4-201ENSMUST00000070487 Cog6Q8R3I3 657 aa29.51■■■□□ 2.31
Cpsf4-201ENSMUST00000070487 DnttP09838 530 aa29.5■■■□□ 2.31
Cpsf4-201ENSMUST00000070487 Slc4a4O88343 1079 aa29.49■■■□□ 2.31
Cpsf4-201ENSMUST00000070487 Mdm2P23804 489 aa29.49■■■□□ 2.31
Cpsf4-201ENSMUST00000070487 Gnat2P50149 354 aa29.49■■■□□ 2.31
Cpsf4-201ENSMUST00000070487 Eef2P58252 858 aaKnown RBP29.49■■■□□ 2.31
Cpsf4-201ENSMUST00000070487 Mum1l1Q4VA55 681 aa29.49■■■□□ 2.31
Cpsf4-201ENSMUST00000070487 Prune1Q8BIW1 454 aa29.49■■■□□ 2.31
Cpsf4-201ENSMUST00000070487 Adam1bQ8R534 806 aa29.49■■■□□ 2.31
Cpsf4-201ENSMUST00000070487 Q9D2X8 372 aa29.49■■■□□ 2.31
Cpsf4-201ENSMUST00000070487 Mei1Q9D4I2 1268 aa29.49■■■□□ 2.31
Cpsf4-201ENSMUST00000070487 NesQ6P5H2 1864 aaKnown RBP29.48■■■□□ 2.31
Cpsf4-201ENSMUST00000070487 Tbc1d9bQ5SVR0 1263 aa29.48■■■□□ 2.31
Cpsf4-201ENSMUST00000070487 Mb21d2Q8C525 428 aa29.48■■■□□ 2.31
Cpsf4-201ENSMUST00000070487 Atxn7Q8R4I1 867 aa29.48■■■□□ 2.31
Cpsf4-201ENSMUST00000070487 Rai14Q9EP71 979 aaKnown RBP29.48■■■□□ 2.31
Cpsf4-201ENSMUST00000070487 Slain1Q68FF7 579 aa29.47■■■□□ 2.31
Cpsf4-201ENSMUST00000070487 Ddx11Q6AXC6 880 aa29.47■■■□□ 2.31
Cpsf4-201ENSMUST00000070487 Senp5Q6NXL6 749 aa29.47■■■□□ 2.31
Cpsf4-201ENSMUST00000070487 Trim56Q80VI1 734 aaKnown RBP29.47■■■□□ 2.31
Cpsf4-201ENSMUST00000070487 Lmbrd2Q8C561 694 aa29.47■■■□□ 2.31
Cpsf4-201ENSMUST00000070487 Tbc1d7Q9D0K0 293 aa29.47■■■□□ 2.31
Cpsf4-201ENSMUST00000070487 Txnrd2Q9JLT4 524 aa29.47■■■□□ 2.31
Cpsf4-201ENSMUST00000070487 Hap1O35668 628 aa29.46■■■□□ 2.31
Cpsf4-201ENSMUST00000070487 Secisbp2lQ6A098 1086 aaKnown RBP29.46■■■□□ 2.31
Cpsf4-201ENSMUST00000070487 Prpf38aQ4FK66 312 aaKnown RBP29.45■■■□□ 2.31
Cpsf4-201ENSMUST00000070487 Tmc4Q7TQ65 694 aa29.45■■■□□ 2.31
Cpsf4-201ENSMUST00000070487 Spata21Q8BHW6 681 aa29.45■■■□□ 2.31
Cpsf4-201ENSMUST00000070487 Phf20Q8BLG0 1010 aaKnown RBP29.45■■■□□ 2.31
Cpsf4-201ENSMUST00000070487 Tsc2Q61037 1814 aa29.45■■■□□ 2.31
Cpsf4-201ENSMUST00000070487 1700003F12RikA2AKE5 210 aa29.45■■■□□ 2.3
Cpsf4-201ENSMUST00000070487 Prkg1P0C605 671 aa29.45■■■□□ 2.3
Cpsf4-201ENSMUST00000070487 Fam178bQ24JP3 464 aa29.45■■■□□ 2.3
Cpsf4-201ENSMUST00000070487 C8aQ8K182 587 aa29.45■■■□□ 2.3
Cpsf4-201ENSMUST00000070487 Eif5P59325 429 aaKnown RBP29.44■■■□□ 2.3
Cpsf4-201ENSMUST00000070487 Znf697Q569E7 569 aa29.44■■■□□ 2.3
Cpsf4-201ENSMUST00000070487 PhaxQ9JJT9 385 aaKnown RBP29.44■■■□□ 2.3
Cpsf4-201ENSMUST00000070487 S1pr4Q9Z0L1 386 aa29.44■■■□□ 2.3
Cpsf4-201ENSMUST00000070487 Pitpnm2Q6ZPQ6 1335 aa29.44■■■□□ 2.3
Cpsf4-201ENSMUST00000070487 Prss40A6H6T1 365 aa29.43■■■□□ 2.3
Cpsf4-201ENSMUST00000070487 Ppp2r3aB2RXC8 1150 aa29.43■■■□□ 2.3
Cpsf4-201ENSMUST00000070487 Mfap1aC0HKD8 439 aaKnown RBP29.43■■■□□ 2.3
Cpsf4-201ENSMUST00000070487 Mfap1bC0HKD9 439 aaKnown RBP29.43■■■□□ 2.3
Cpsf4-201ENSMUST00000070487 MycnP03966 462 aaKnown RBP29.43■■■□□ 2.3
Cpsf4-201ENSMUST00000070487 Pramel6Q810Y9 485 aa29.43■■■□□ 2.3
Cpsf4-201ENSMUST00000070487 Rbm43Q99J64 343 aa29.43■■■□□ 2.3
Cpsf4-201ENSMUST00000070487 Ak7Q9D2H2 614 aa29.43■■■□□ 2.3
Cpsf4-201ENSMUST00000070487 Arrdc4A0A0B4J1F4 415 aa29.42■■■□□ 2.3
Cpsf4-201ENSMUST00000070487 Ppfia1B2RXQ2 1266 aa29.42■■■□□ 2.3
Cpsf4-201ENSMUST00000070487 Vcam1P29533 739 aa29.42■■■□□ 2.3
Cpsf4-201ENSMUST00000070487 Ireb2Q811J3 963 aaKnown RBP29.42■■■□□ 2.3
Cpsf4-201ENSMUST00000070487 Rgs12Q8CGE9 1381 aa29.42■■■□□ 2.3
Cpsf4-201ENSMUST00000070487 Bnip3O55003 187 aa29.42■■■□□ 2.3
Cpsf4-201ENSMUST00000070487 Bace1P56818 501 aa29.42■■■□□ 2.3
Cpsf4-201ENSMUST00000070487 B4galnt3Q6L8S8 986 aa29.42■■■□□ 2.3
Cpsf4-201ENSMUST00000070487 Pxylp1Q8BHA9 480 aa29.42■■■□□ 2.3
Cpsf4-201ENSMUST00000070487 Ces1dQ8VCT4 565 aa29.42■■■□□ 2.3
Cpsf4-201ENSMUST00000070487 EhhadhQ9DBM2 718 aa29.42■■■□□ 2.3
Cpsf4-201ENSMUST00000070487 Prg3Q9JL95 222 aa29.42■■■□□ 2.3
Cpsf4-201ENSMUST00000070487 Phlpp2Q8BXA7 1320 aa29.42■■■□□ 2.3
Cpsf4-201ENSMUST00000070487 HunkO88866 714 aa29.41■■■□□ 2.3
Cpsf4-201ENSMUST00000070487 Pou3f3P31361 497 aa29.41■■■□□ 2.3
Cpsf4-201ENSMUST00000070487 Exoc8Q6PGF7 716 aa29.41■■■□□ 2.3
Cpsf4-201ENSMUST00000070487 Nek11Q8C0Q4 628 aa29.41■■■□□ 2.3
Cpsf4-201ENSMUST00000070487 AidaQ8C4Q6 305 aa29.41■■■□□ 2.3
Cpsf4-201ENSMUST00000070487 Fam83aQ8K2P2 436 aa29.41■■■□□ 2.3
Cpsf4-201ENSMUST00000070487 CenppQ9CZ92 286 aa29.41■■■□□ 2.3
Cpsf4-201ENSMUST00000070487 Il21rQ9JHX3 529 aa29.41■■■□□ 2.3
Cpsf4-201ENSMUST00000070487 Cacna1fQ9JIS7 1985 aa29.4■■■□□ 2.3
Cpsf4-201ENSMUST00000070487 Atrnl1Q6A051 1378 aa29.4■■■□□ 2.3
Cpsf4-201ENSMUST00000070487 Fam186bD3Z420 943 aa29.4■■■□□ 2.3
Cpsf4-201ENSMUST00000070487 MecomP14404 1042 aa29.4■■■□□ 2.3
Cpsf4-201ENSMUST00000070487 Nkx1-2P42580 305 aa29.4■■■□□ 2.3
Cpsf4-201ENSMUST00000070487 Ehmt1Q5DW34 1296 aa29.4■■■□□ 2.3
Cpsf4-201ENSMUST00000070487 Ppm1gQ61074 542 aa29.4■■■□□ 2.3
Cpsf4-201ENSMUST00000070487 Krt74Q6IFZ9 495 aa29.4■■■□□ 2.3
Retrieved 100 of 22,080 RNA–protein pairs in 40.2 ms