RNA–Protein interactions for RNA: ENSMUST00000062439.4

Ccdc54-201, Transcript of Coiled-coil domain-containing protein 54, mousemouse

APPRIS P1 BASIC

Gene Ccdc54, Length 1,296 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc54-201ENSMUST00000062439 Znf865Q3U3I9 1058 aa10.41□□□□□ -0.74
Ccdc54-201ENSMUST00000062439 Pak4Q8BTW9 593 aa10.41□□□□□ -0.74
Ccdc54-201ENSMUST00000062439 BbxQ8VBW5 907 aa10.41□□□□□ -0.74
Ccdc54-201ENSMUST00000062439 Cdca3Q99M54 266 aa10.41□□□□□ -0.74
Ccdc54-201ENSMUST00000062439 4931400O07RikQ9D4M5 137 aa10.41□□□□□ -0.74
Ccdc54-201ENSMUST00000062439 Top2aQ01320 1528 aaKnown RBP10.41□□□□□ -0.74
Ccdc54-201ENSMUST00000062439 Ect2lA0A140LIP2 953 aa10.4□□□□□ -0.74
Ccdc54-201ENSMUST00000062439 Dsg3O35902 993 aa10.4□□□□□ -0.74
Ccdc54-201ENSMUST00000062439 Vti1aO89116 217 aa10.4□□□□□ -0.74
Ccdc54-201ENSMUST00000062439 Pdia4P08003 638 aaKnown RBP10.4□□□□□ -0.74
Ccdc54-201ENSMUST00000062439 Cers3Q1A3B0 383 aa10.4□□□□□ -0.74
Ccdc54-201ENSMUST00000062439 Gas2l3Q3UWW6 683 aa10.4□□□□□ -0.74
Ccdc54-201ENSMUST00000062439 Scube1Q6NZL8 1018 aa10.4□□□□□ -0.74
Ccdc54-201ENSMUST00000062439 Efcab3Q80X60 432 aa10.4□□□□□ -0.74
Ccdc54-201ENSMUST00000062439 Nim1kQ8BHI9 436 aa10.4□□□□□ -0.74
Ccdc54-201ENSMUST00000062439 Kiaa1024Q8K3V7 917 aa10.4□□□□□ -0.74
Ccdc54-201ENSMUST00000062439 PlvapQ91VC4 438 aa10.4□□□□□ -0.74
Ccdc54-201ENSMUST00000062439 Cdca5Q9CPY3 264 aa10.4□□□□□ -0.74
Ccdc54-201ENSMUST00000062439 TarsQ9D0R2 722 aaKnown RBP10.4□□□□□ -0.74
Ccdc54-201ENSMUST00000062439 Ccdc88bQ4QRL3 1481 aa10.4□□□□□ -0.74
Ccdc54-201ENSMUST00000062439 Gm3618D3Z4P5 127 aa10.39□□□□□ -0.75
Ccdc54-201ENSMUST00000062439 Atp2b1G5E829 1220 aa10.39□□□□□ -0.75
Ccdc54-201ENSMUST00000062439 ArsaP50428 506 aa10.39□□□□□ -0.75
Ccdc54-201ENSMUST00000062439 Rnf43Q5NCP0 784 aa10.39□□□□□ -0.75
Ccdc54-201ENSMUST00000062439 Gpr20Q8BYC4 358 aa10.39□□□□□ -0.75
Ccdc54-201ENSMUST00000062439 Rab11fip3Q8CHD8 1047 aa10.39□□□□□ -0.75
Ccdc54-201ENSMUST00000062439 Klhl36Q8R124 613 aa10.39□□□□□ -0.75
Ccdc54-201ENSMUST00000062439 Txnrd1Q9JMH6 613 aa10.39□□□□□ -0.75
Ccdc54-201ENSMUST00000062439 Gpr161B2RPY5 545 aa10.38□□□□□ -0.75
Ccdc54-201ENSMUST00000062439 Kdelc2G5E897 503 aa10.38□□□□□ -0.75
Ccdc54-201ENSMUST00000062439 Gm42641I6L9G2 585 aa10.38□□□□□ -0.75
Ccdc54-201ENSMUST00000062439 Zap70P43404 618 aa10.38□□□□□ -0.75
Ccdc54-201ENSMUST00000062439 Kcnj6P48542 425 aa10.38□□□□□ -0.75
Ccdc54-201ENSMUST00000062439 SgcbP82349 320 aa10.38□□□□□ -0.75
Ccdc54-201ENSMUST00000062439 Kcnf1Q7TSH7 493 aa10.38□□□□□ -0.75
Ccdc54-201ENSMUST00000062439 Adamtsl2Q7TSK7 957 aa10.38□□□□□ -0.75
Ccdc54-201ENSMUST00000062439 AtripQ8BMG1 785 aa10.38□□□□□ -0.75
Ccdc54-201ENSMUST00000062439 Adgra1Q8C4G9 578 aa10.38□□□□□ -0.75
Ccdc54-201ENSMUST00000062439 Il17rcQ8K4C2 698 aa10.38□□□□□ -0.75
Ccdc54-201ENSMUST00000062439 Disp1Q3TDN0 1521 aa10.38□□□□□ -0.75
Ccdc54-201ENSMUST00000062439 Efcab5A0JP43 1406 aa10.37□□□□□ -0.75
Ccdc54-201ENSMUST00000062439 AlyrefO08583 255 aaKnown RBP10.37□□□□□ -0.75
Ccdc54-201ENSMUST00000062439 Gm12185Q5NCB2 835 aa10.37□□□□□ -0.75
Ccdc54-201ENSMUST00000062439 Znf830Q8R1N0 363 aaKnown RBP10.37□□□□□ -0.75
Ccdc54-201ENSMUST00000062439 Pcdhb10Q91VE5 797 aa10.37□□□□□ -0.75
Ccdc54-201ENSMUST00000062439 Anapc16Q9CPV2 110 aa10.37□□□□□ -0.75
Ccdc54-201ENSMUST00000062439 CrotQ9DC50 612 aa10.37□□□□□ -0.75
Ccdc54-201ENSMUST00000062439 Ern1Q9EQY0 977 aa10.37□□□□□ -0.75
Ccdc54-201ENSMUST00000062439 MvkQ9R008 395 aa10.37□□□□□ -0.75
Ccdc54-201ENSMUST00000062439 Pcsk2P21661 637 aa10.36□□□□□ -0.75
Ccdc54-201ENSMUST00000062439 HdcP23738 662 aa10.36□□□□□ -0.75
Ccdc54-201ENSMUST00000062439 Cdk11bP24788 784 aaKnown RBP10.36□□□□□ -0.75
Ccdc54-201ENSMUST00000062439 Id3P41133 119 aa10.36□□□□□ -0.75
Ccdc54-201ENSMUST00000062439 Slc45a2P58355 530 aa10.36□□□□□ -0.75
Ccdc54-201ENSMUST00000062439 Plcl1Q3USB7 1096 aa10.36□□□□□ -0.75
Ccdc54-201ENSMUST00000062439 Cyp2c67Q569X9 491 aa10.36□□□□□ -0.75
Ccdc54-201ENSMUST00000062439 Moxd2Q7TT41 619 aa10.36□□□□□ -0.75
Ccdc54-201ENSMUST00000062439 ApipQ9WVQ5 241 aa10.36□□□□□ -0.75
Ccdc54-201ENSMUST00000062439 Nup160Q9Z0W3 1402 aaKnown RBP10.35□□□□□ -0.75
Ccdc54-201ENSMUST00000062439 Lbhd1A0A087WPA0 259 aa10.35□□□□□ -0.75
Ccdc54-201ENSMUST00000062439 Gm36176A0A1W2P8D5 158 aa10.35□□□□□ -0.75
Ccdc54-201ENSMUST00000062439 Eif6O55135 245 aa10.35□□□□□ -0.75
Ccdc54-201ENSMUST00000062439 P01648 108 aa10.35□□□□□ -0.75
Ccdc54-201ENSMUST00000062439 Lamp2P17047 415 aa10.35□□□□□ -0.75
Ccdc54-201ENSMUST00000062439 St8sia5P70126 412 aa10.35□□□□□ -0.75
Ccdc54-201ENSMUST00000062439 Pank2Q3U4S0 443 aa10.35□□□□□ -0.75
Ccdc54-201ENSMUST00000062439 Cep44Q5HZK1 386 aa10.35□□□□□ -0.75
Ccdc54-201ENSMUST00000062439 Kif18bQ6PFD6 834 aa10.35□□□□□ -0.75
Ccdc54-201ENSMUST00000062439 Ubash3bQ8BGG7 638 aa10.35□□□□□ -0.75
Ccdc54-201ENSMUST00000062439 Tmem260Q8BMD6 703 aa10.35□□□□□ -0.75
Ccdc54-201ENSMUST00000062439 Zmynd15Q8C0R7 736 aa10.35□□□□□ -0.75
Ccdc54-201ENSMUST00000062439 Yipf4Q8C407 246 aa10.35□□□□□ -0.75
Ccdc54-201ENSMUST00000062439 Cwf19l1Q8CI33 537 aa10.35□□□□□ -0.75
Ccdc54-201ENSMUST00000062439 Adam1bQ8R534 806 aa10.35□□□□□ -0.75
Ccdc54-201ENSMUST00000062439 Smg8Q8VE18 991 aa10.35□□□□□ -0.75
Ccdc54-201ENSMUST00000062439 Lce1mQ9CR91 182 aa10.35□□□□□ -0.75
Ccdc54-201ENSMUST00000062439 Tpd52l2Q9CYZ2 220 aaKnown RBP10.35□□□□□ -0.75
Ccdc54-201ENSMUST00000062439 NrkQ9R0G8 1455 aa10.35□□□□□ -0.75
Ccdc54-201ENSMUST00000062439 Gm21936A0A1Y7VJE9 144 aa10.34□□□□□ -0.75
Ccdc54-201ENSMUST00000062439 Gm5788A0A1Y7VK80 144 aa10.34□□□□□ -0.75
Ccdc54-201ENSMUST00000062439 Gm5039J3QNT6 144 aa10.34□□□□□ -0.75
Ccdc54-201ENSMUST00000062439 Gm2035J3QP87 144 aa10.34□□□□□ -0.75
Ccdc54-201ENSMUST00000062439 CtshP49935 333 aa10.34□□□□□ -0.75
Ccdc54-201ENSMUST00000062439 Gm2016Q3TQZ4 144 aa10.34□□□□□ -0.75
Ccdc54-201ENSMUST00000062439 Gm8332Q3UTA4 144 aa10.34□□□□□ -0.75
Ccdc54-201ENSMUST00000062439 Aoc2Q812C9 757 aa10.34□□□□□ -0.75
Ccdc54-201ENSMUST00000062439 Gm5662Q8BX20 144 aa10.34□□□□□ -0.75
Ccdc54-201ENSMUST00000062439 Pabpc6Q9D4E6 643 aaKnown RBP10.34□□□□□ -0.75
Ccdc54-201ENSMUST00000062439 Ripk3Q9QZL0 486 aa10.34□□□□□ -0.75
Ccdc54-201ENSMUST00000062439 P84750 121 aa10.33□□□□□ -0.76
Ccdc54-201ENSMUST00000062439 Bmp3Q8BHE5 468 aa10.33□□□□□ -0.76
Ccdc54-201ENSMUST00000062439 Naa30Q8CES0 364 aa10.33□□□□□ -0.76
Ccdc54-201ENSMUST00000062439 Tmem192Q9CXT7 266 aa10.33□□□□□ -0.76
Ccdc54-201ENSMUST00000062439 Ngly1Q9JI78 651 aa10.33□□□□□ -0.76
Ccdc54-201ENSMUST00000062439 ReckQ9Z0J1 971 aa10.33□□□□□ -0.76
Ccdc54-201ENSMUST00000062439 Cc2d2bA0A286YDU8 1405 aa10.33□□□□□ -0.76
Ccdc54-201ENSMUST00000062439 OgdhlE9Q7L0 1029 aa10.32□□□□□ -0.76
Ccdc54-201ENSMUST00000062439 Tmem173Q3TBT3 378 aa10.32□□□□□ -0.76
Ccdc54-201ENSMUST00000062439 Slc9a2Q3ZAS0 814 aa10.32□□□□□ -0.76
Ccdc54-201ENSMUST00000062439 Dll1Q61483 722 aa10.32□□□□□ -0.76
Retrieved 100 of 22,080 RNA–protein pairs in 27.2 ms