RNA–Protein interactions for RNA: ENSMUST00000061279.9

Pcdhga11-201, Transcript of Protocadherin gamma A11, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdhga11, Length 4,756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga11-201ENSMUST00000061279 Lmbr1lQ9D1E5 489 aa13.72□□□□□ -0.21
Pcdhga11-201ENSMUST00000061279 Dydc1Q9D9T0 175 aa13.72□□□□□ -0.21
Pcdhga11-201ENSMUST00000061279 Cbx6Q9DBY5 414 aa13.72□□□□□ -0.21
Pcdhga11-201ENSMUST00000061279 SyncQ9EPM5 470 aa13.72□□□□□ -0.21
Pcdhga11-201ENSMUST00000061279 Vmn2r23E9PXI5 849 aa13.72□□□□□ -0.21
Pcdhga11-201ENSMUST00000061279 Rbm17Q8JZX4 405 aaKnown RBP13.72□□□□□ -0.21
Pcdhga11-201ENSMUST00000061279 Vps16Q920Q4 839 aa13.72□□□□□ -0.21
Pcdhga11-201ENSMUST00000061279 Gps2Q921N8 327 aa13.72□□□□□ -0.21
Pcdhga11-201ENSMUST00000061279 PhaxQ9JJT9 385 aaKnown RBP13.72□□□□□ -0.21
Pcdhga11-201ENSMUST00000061279 Atf5O70191 283 aa13.71□□□□□ -0.21
Pcdhga11-201ENSMUST00000061279 Grin1P35438 938 aa13.71□□□□□ -0.21
Pcdhga11-201ENSMUST00000061279 Tubb6Q922F4 447 aa13.71□□□□□ -0.21
Pcdhga11-201ENSMUST00000061279 Eps8l2Q99K30 729 aa13.71□□□□□ -0.21
Pcdhga11-201ENSMUST00000061279 Cep83Q9D5R3 692 aa13.71□□□□□ -0.21
Pcdhga11-201ENSMUST00000061279 Prex1Q69ZK0 1650 aa13.71□□□□□ -0.21
Pcdhga11-201ENSMUST00000061279 Cacna2d1O08532 1103 aa13.71□□□□□ -0.21
Pcdhga11-201ENSMUST00000061279 Cct6aP80317 531 aaKnown RBP13.71□□□□□ -0.21
Pcdhga11-201ENSMUST00000061279 CoilQ5SU73 570 aa13.71□□□□□ -0.21
Pcdhga11-201ENSMUST00000061279 DbnlQ62418 436 aa13.71□□□□□ -0.21
Pcdhga11-201ENSMUST00000061279 Top1Q04750 767 aaKnown RBP13.71□□□□□ -0.21
Pcdhga11-201ENSMUST00000061279 Spag7Q7TNE3 227 aaKnown RBP13.71□□□□□ -0.21
Pcdhga11-201ENSMUST00000061279 Nek11Q8C0Q4 628 aa13.71□□□□□ -0.21
Pcdhga11-201ENSMUST00000061279 Ptcd1Q8C2E4 695 aaKnown RBP13.71□□□□□ -0.21
Pcdhga11-201ENSMUST00000061279 Ndufab1Q9CR21 156 aa13.71□□□□□ -0.21
Pcdhga11-201ENSMUST00000061279 NapgQ9CWZ7 312 aa13.71□□□□□ -0.21
Pcdhga11-201ENSMUST00000061279 Ankrd35E9Q9D8 996 aa13.71□□□□□ -0.22
Pcdhga11-201ENSMUST00000061279 NntQ61941 1086 aaKnown RBP13.71□□□□□ -0.22
Pcdhga11-201ENSMUST00000061279 TxlnbQ8VBT1 685 aa13.71□□□□□ -0.22
Pcdhga11-201ENSMUST00000061279 Filip1Q9CS72 1211 aa13.71□□□□□ -0.22
Pcdhga11-201ENSMUST00000061279 Fndc1E9Q043 1732 aa13.7□□□□□ -0.22
Pcdhga11-201ENSMUST00000061279 Traf1P39428 409 aa13.7□□□□□ -0.22
Pcdhga11-201ENSMUST00000061279 Ccdc129Q14B48 1034 aa13.7□□□□□ -0.22
Pcdhga11-201ENSMUST00000061279 Prl2c1Q5SVL9 228 aa13.7□□□□□ -0.22
Pcdhga11-201ENSMUST00000061279 Nck2O55033 380 aa13.7□□□□□ -0.22
Pcdhga11-201ENSMUST00000061279 Nkx2-5P42582 318 aa13.7□□□□□ -0.22
Pcdhga11-201ENSMUST00000061279 Fermt3Q8K1B8 665 aa13.7□□□□□ -0.22
Pcdhga11-201ENSMUST00000061279 CenphQ9QYM8 241 aa13.7□□□□□ -0.22
Pcdhga11-201ENSMUST00000061279 Sdc2P43407 202 aa13.7□□□□□ -0.22
Pcdhga11-201ENSMUST00000061279 Pcdhb14Q6PB90 796 aa13.7□□□□□ -0.22
Pcdhga11-201ENSMUST00000061279 Lmod1Q8BVA4 595 aa13.7□□□□□ -0.22
Pcdhga11-201ENSMUST00000061279 Tpm3-rs7D3Z2H9 248 aa13.7□□□□□ -0.22
Pcdhga11-201ENSMUST00000061279 Gm21671G3UY31 267 aa13.7□□□□□ -0.22
Pcdhga11-201ENSMUST00000061279 Rc3h1Q4VGL6 1130 aaKnown RBP13.7□□□□□ -0.22
Pcdhga11-201ENSMUST00000061279 Pex1Q5BL07 1284 aa13.7□□□□□ -0.22
Pcdhga11-201ENSMUST00000061279 Asnsd1Q8BFS9 627 aa13.7□□□□□ -0.22
Pcdhga11-201ENSMUST00000061279 Trim59Q922Y2 403 aa13.7□□□□□ -0.22
Pcdhga11-201ENSMUST00000061279 Mageb16Q9CWV4 363 aa13.7□□□□□ -0.22
Pcdhga11-201ENSMUST00000061279 HnrnpmQ9D0E1 729 aaKnown RBP13.7□□□□□ -0.22
Pcdhga11-201ENSMUST00000061279 SarnpQ9D1J3 210 aaKnown RBP13.7□□□□□ -0.22
Pcdhga11-201ENSMUST00000061279 PigoQ9JJI6 1093 aa13.7□□□□□ -0.22
Pcdhga11-201ENSMUST00000061279 Abca17E9PX95 1733 aa13.69□□□□□ -0.22
Pcdhga11-201ENSMUST00000061279 BrapQ99MP8 591 aa13.69□□□□□ -0.22
Pcdhga11-201ENSMUST00000061279 Ccdc39Q9D5Y1 937 aa13.69□□□□□ -0.22
Pcdhga11-201ENSMUST00000061279 Polr2dQ9D7M8 142 aaKnown RBP13.69□□□□□ -0.22
Pcdhga11-201ENSMUST00000061279 Kcnh3Q9WVJ0 1095 aa13.69□□□□□ -0.22
Pcdhga11-201ENSMUST00000061279 PtprmP28828 1452 aa13.69□□□□□ -0.22
Pcdhga11-201ENSMUST00000061279 Cyp2j7A0A140T8U1 504 aa13.69□□□□□ -0.22
Pcdhga11-201ENSMUST00000061279 Tdo2P48776 406 aa13.69□□□□□ -0.22
Pcdhga11-201ENSMUST00000061279 Usp5P56399 858 aaKnown RBP13.69□□□□□ -0.22
Pcdhga11-201ENSMUST00000061279 Adora1Q60612 326 aa13.69□□□□□ -0.22
Pcdhga11-201ENSMUST00000061279 Naif1Q6PFD7 327 aa13.69□□□□□ -0.22
Pcdhga11-201ENSMUST00000061279 Luc7l2Q7TNC4 392 aaKnown RBP13.69□□□□□ -0.22
Pcdhga11-201ENSMUST00000061279 Q8BT18 775 aa13.69□□□□□ -0.22
Pcdhga11-201ENSMUST00000061279 Sash3Q8K352 380 aa13.69□□□□□ -0.22
Pcdhga11-201ENSMUST00000061279 Dnajc28Q8VCE1 385 aa13.69□□□□□ -0.22
Pcdhga11-201ENSMUST00000061279 FancaQ9JL70 1439 aa13.69□□□□□ -0.22
Pcdhga11-201ENSMUST00000061279 Znf518aB2RRF6 1478 aaKnown RBP13.69□□□□□ -0.22
Pcdhga11-201ENSMUST00000061279 Rassf6Q80UQ2 353 aa13.69□□□□□ -0.22
Pcdhga11-201ENSMUST00000061279 Tcp11Q01755 566 aa13.68□□□□□ -0.22
Pcdhga11-201ENSMUST00000061279 PsdQ5DTT2 1024 aa13.68□□□□□ -0.22
Pcdhga11-201ENSMUST00000061279 Prdm1Q60636 856 aa13.68□□□□□ -0.22
Pcdhga11-201ENSMUST00000061279 Ift122Q6NWV3 1182 aa13.68□□□□□ -0.22
Pcdhga11-201ENSMUST00000061279 Trim56Q80VI1 734 aaKnown RBP13.68□□□□□ -0.22
Pcdhga11-201ENSMUST00000061279 Bpifb6Q8BU51 449 aa13.68□□□□□ -0.22
Pcdhga11-201ENSMUST00000061279 Cdc45Q9Z1X9 566 aa13.68□□□□□ -0.22
Pcdhga11-201ENSMUST00000061279 Pnpla7A2AJ88 1352 aa13.68□□□□□ -0.22
Pcdhga11-201ENSMUST00000061279 Ttc13A0A1L1SSC7 844 aa13.68□□□□□ -0.22
Pcdhga11-201ENSMUST00000061279 Sco1Q5SUC9 284 aa13.68□□□□□ -0.22
Pcdhga11-201ENSMUST00000061279 Elf1Q60775 612 aa13.68□□□□□ -0.22
Pcdhga11-201ENSMUST00000061279 PnocQ64387 187 aa13.68□□□□□ -0.22
Pcdhga11-201ENSMUST00000061279 Mb21d2Q8C525 428 aa13.68□□□□□ -0.22
Pcdhga11-201ENSMUST00000061279 Prpf6Q91YR7 941 aaKnown RBP13.68□□□□□ -0.22
Pcdhga11-201ENSMUST00000061279 Gm29094F6Q785 221 aa13.68□□□□□ -0.22
Pcdhga11-201ENSMUST00000061279 Ezh2Q61188 746 aaKnown RBP13.68□□□□□ -0.22
Pcdhga11-201ENSMUST00000061279 Haus7Q8BKT8 364 aa13.68□□□□□ -0.22
Pcdhga11-201ENSMUST00000061279 Trap1Q9CQN1 706 aaKnown RBP13.68□□□□□ -0.22
Pcdhga11-201ENSMUST00000061279 MthfsQ9D110 203 aa13.68□□□□□ -0.22
Pcdhga11-201ENSMUST00000061279 Echdc1Q9D9V3 322 aa13.68□□□□□ -0.22
Pcdhga11-201ENSMUST00000061279 Dctpp1Q9QY93 170 aa13.68□□□□□ -0.22
Pcdhga11-201ENSMUST00000061279 Tbx2Q60707 711 aa13.68□□□□□ -0.22
Pcdhga11-201ENSMUST00000061279 Leng8Q8CBY3 785 aaKnown RBP13.68□□□□□ -0.22
Pcdhga11-201ENSMUST00000061279 Mettl5Q8K1A0 209 aa13.68□□□□□ -0.22
Pcdhga11-201ENSMUST00000061279 Frmpd2A0A140LI67 1392 aa13.67□□□□□ -0.22
Pcdhga11-201ENSMUST00000061279 GpkowQ56A08 488 aa13.67□□□□□ -0.22
Pcdhga11-201ENSMUST00000061279 Nf2P46662 596 aa13.67□□□□□ -0.22
Pcdhga11-201ENSMUST00000061279 Timm10P62073 90 aa13.67□□□□□ -0.22
Pcdhga11-201ENSMUST00000061279 Gm28047Q3US59 414 aa13.67□□□□□ -0.22
Pcdhga11-201ENSMUST00000061279 CgasQ8C6L5 507 aa13.67□□□□□ -0.22
Pcdhga11-201ENSMUST00000061279 Trp53inp1Q9QXE4 239 aa13.67□□□□□ -0.22
Pcdhga11-201ENSMUST00000061279 Letm1Q9Z2I0 738 aa13.67□□□□□ -0.22
Retrieved 100 of 22,080 RNA–protein pairs in 15.1 ms