RNA–Protein interactions for RNA: ENSMUST00000053317.11

Bdnf-201, Transcript of Brain-derived neurotrophic factor, mousemouse

TSL 1 (best) BASIC

Gene Bdnf, Length 4,266 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-201ENSMUST00000053317 Prr7Q3V0I2 269 aa8.12□□□□□ -1.11
Bdnf-201ENSMUST00000053317 Mapk4Q6P5G0 583 aa8.12□□□□□ -1.11
Bdnf-201ENSMUST00000053317 Irgm2A0A140LIF8 407 aa8.11□□□□□ -1.11
Bdnf-201ENSMUST00000053317 Calcoco2A2A6M5 331 aa8.11□□□□□ -1.11
Bdnf-201ENSMUST00000053317 Arid4aF8VPQ2 1261 aaKnown RBP8.11□□□□□ -1.11
Bdnf-201ENSMUST00000053317 LifrP42703 1092 aa8.11□□□□□ -1.11
Bdnf-201ENSMUST00000053317 Fam228bQ497Q6 232 aa8.11□□□□□ -1.11
Bdnf-201ENSMUST00000053317 Tekt3Q6X6Z7 490 aa8.11□□□□□ -1.11
Bdnf-201ENSMUST00000053317 SpidrQ8BGX7 933 aa8.11□□□□□ -1.11
Bdnf-201ENSMUST00000053317 Smc5Q8CG46 1101 aaKnown RBP8.11□□□□□ -1.11
Bdnf-201ENSMUST00000053317 B3galt4Q9Z0F0 371 aa8.11□□□□□ -1.11
Bdnf-201ENSMUST00000053317 Zmynd8A2A484 1235 aaKnown RBP8.11□□□□□ -1.11
Bdnf-201ENSMUST00000053317 Usp5P56399 858 aaKnown RBP8.11□□□□□ -1.11
Bdnf-201ENSMUST00000053317 AcrbpQ3V140 540 aa8.11□□□□□ -1.11
Bdnf-201ENSMUST00000053317 Rnf20Q5DTM8 973 aa8.11□□□□□ -1.11
Bdnf-201ENSMUST00000053317 Krt74Q6IFZ9 495 aa8.11□□□□□ -1.11
Bdnf-201ENSMUST00000053317 Myh1Q5SX40 1942 aa8.11□□□□□ -1.11
Bdnf-201ENSMUST00000053317 Aox4Q3TYQ9 1336 aa8.11□□□□□ -1.11
Bdnf-201ENSMUST00000053317 Ric1Q69ZJ7 1422 aa8.11□□□□□ -1.11
Bdnf-201ENSMUST00000053317 Gm973E9Q295 1059 aa8.11□□□□□ -1.11
Bdnf-201ENSMUST00000053317 Me1P06801 572 aa8.11□□□□□ -1.11
Bdnf-201ENSMUST00000053317 Map3k9Q3U1V8 1077 aa8.11□□□□□ -1.11
Bdnf-201ENSMUST00000053317 Nlgn2Q69ZK9 836 aa8.11□□□□□ -1.11
Bdnf-201ENSMUST00000053317 Znf771Q8BJ90 317 aa8.11□□□□□ -1.11
Bdnf-201ENSMUST00000053317 PaoxQ8C0L6 504 aa8.11□□□□□ -1.11
Bdnf-201ENSMUST00000053317 Slc18a1Q8R090 521 aa8.11□□□□□ -1.11
Bdnf-201ENSMUST00000053317 Ak7Q9D2H2 614 aa8.11□□□□□ -1.11
Bdnf-201ENSMUST00000053317 Ppil2Q9D787 521 aa8.11□□□□□ -1.11
Bdnf-201ENSMUST00000053317 Appbp2Q9DAX9 585 aa8.11□□□□□ -1.11
Bdnf-201ENSMUST00000053317 Usp53P15975 1069 aa8.1□□□□□ -1.11
Bdnf-201ENSMUST00000053317 Fam178bQ24JP3 464 aa8.1□□□□□ -1.11
Bdnf-201ENSMUST00000053317 Aldh8a1Q8BH00 487 aa8.1□□□□□ -1.11
Bdnf-201ENSMUST00000053317 AampJ3QN89 436 aa8.1□□□□□ -1.11
Bdnf-201ENSMUST00000053317 DnttP09838 530 aa8.1□□□□□ -1.11
Bdnf-201ENSMUST00000053317 Evi5P97366 809 aa8.1□□□□□ -1.11
Bdnf-201ENSMUST00000053317 Prdm1Q60636 856 aa8.1□□□□□ -1.11
Bdnf-201ENSMUST00000053317 Yipf1Q91VU1 306 aa8.1□□□□□ -1.11
Bdnf-201ENSMUST00000053317 Lrrfip2Q91WK0 415 aa8.1□□□□□ -1.11
Bdnf-201ENSMUST00000053317 Col20a1Q923P0 1320 aa8.1□□□□□ -1.11
Bdnf-201ENSMUST00000053317 Pus7B7ZNL8 666 aaKnown RBP8.1□□□□□ -1.11
Bdnf-201ENSMUST00000053317 Ces1hD3Z298 562 aa8.1□□□□□ -1.11
Bdnf-201ENSMUST00000053317 L1camP11627 1260 aa8.1□□□□□ -1.11
Bdnf-201ENSMUST00000053317 Psmd1Q3TXS7 953 aa8.1□□□□□ -1.11
Bdnf-201ENSMUST00000053317 Kiaa1211Q5PR69 1207 aa8.1□□□□□ -1.11
Bdnf-201ENSMUST00000053317 Tor1aip2Q8BYU6 502 aa8.1□□□□□ -1.11
Bdnf-201ENSMUST00000053317 Cnot6lQ8VEG6 555 aa8.1□□□□□ -1.11
Bdnf-201ENSMUST00000053317 Ppfia1B2RXQ2 1266 aa8.09□□□□□ -1.11
Bdnf-201ENSMUST00000053317 Tbc1d9Q3UYK3 1264 aa8.09□□□□□ -1.11
Bdnf-201ENSMUST00000053317 Ddx49Q4FZF3 480 aaKnown RBP8.09□□□□□ -1.11
Bdnf-201ENSMUST00000053317 Mum1l1Q4VA55 681 aa8.09□□□□□ -1.11
Bdnf-201ENSMUST00000053317 Sulf1Q8K007 870 aa8.09□□□□□ -1.11
Bdnf-201ENSMUST00000053317 Tbc1d23Q8K0F1 684 aa8.09□□□□□ -1.11
Bdnf-201ENSMUST00000053317 HibadhQ99L13 335 aaKnown RBP8.09□□□□□ -1.11
Bdnf-201ENSMUST00000053317 Odf2lQ9D478 642 aa8.09□□□□□ -1.11
Bdnf-201ENSMUST00000053317 Mei1Q9D4I2 1268 aa8.09□□□□□ -1.11
Bdnf-201ENSMUST00000053317 Tfip11Q9ERA6 838 aaKnown RBP8.09□□□□□ -1.11
Bdnf-201ENSMUST00000053317 Ambra1A2AH22 1300 aa8.09□□□□□ -1.11
Bdnf-201ENSMUST00000053317 Pcdhb9E9Q5G2 828 aa8.09□□□□□ -1.11
Bdnf-201ENSMUST00000053317 Klrg2Q3UM83 387 aa8.09□□□□□ -1.11
Bdnf-201ENSMUST00000053317 Ankrd13cQ3UX43 541 aa8.09□□□□□ -1.11
Bdnf-201ENSMUST00000053317 Mdh1bQ5F204 500 aa8.09□□□□□ -1.11
Bdnf-201ENSMUST00000053317 HelbQ6NVF4 1074 aa8.09□□□□□ -1.11
Bdnf-201ENSMUST00000053317 Acap3Q6NXL5 833 aa8.09□□□□□ -1.11
Bdnf-201ENSMUST00000053317 Fsd2Q8BZ52 692 aa8.09□□□□□ -1.11
Bdnf-201ENSMUST00000053317 Krt84Q99M73 603 aa8.09□□□□□ -1.11
Bdnf-201ENSMUST00000053317 Aldh1b1Q9CZS1 519 aa8.09□□□□□ -1.11
Bdnf-201ENSMUST00000053317 MycP01108 439 aa8.09□□□□□ -1.11
Bdnf-201ENSMUST00000053317 Tacc1Q6Y685 774 aa8.09□□□□□ -1.11
Bdnf-201ENSMUST00000053317 Adck5Q80V03 582 aa8.09□□□□□ -1.11
Bdnf-201ENSMUST00000053317 Plcd3Q8K2J0 785 aa8.09□□□□□ -1.11
Bdnf-201ENSMUST00000053317 Ces1dQ8VCT4 565 aa8.09□□□□□ -1.11
Bdnf-201ENSMUST00000053317 MyocO70624 490 aa8.09□□□□□ -1.12
Bdnf-201ENSMUST00000053317 Mmp20P57748 482 aa8.09□□□□□ -1.12
Bdnf-201ENSMUST00000053317 Eef2P58252 858 aaKnown RBP8.09□□□□□ -1.12
Bdnf-201ENSMUST00000053317 Abhd15Q5F2F2 459 aa8.09□□□□□ -1.12
Bdnf-201ENSMUST00000053317 Tmem130Q6NXM3 419 aa8.09□□□□□ -1.12
Bdnf-201ENSMUST00000053317 Paxip1Q6NZQ4 1056 aa8.09□□□□□ -1.12
Bdnf-201ENSMUST00000053317 HdlbpQ8VDJ3 1268 aaKnown RBP8.09□□□□□ -1.12
Bdnf-201ENSMUST00000053317 Ppp4r3bQ922R5 820 aa8.09□□□□□ -1.12
Bdnf-201ENSMUST00000053317 Telo2Q9DC40 840 aaKnown RBP8.09□□□□□ -1.12
Bdnf-201ENSMUST00000053317 Cxcl11Q9JHH5 100 aa8.09□□□□□ -1.12
Bdnf-201ENSMUST00000053317 Ly6iQ9WU67 134 aa8.09□□□□□ -1.12
Bdnf-201ENSMUST00000053317 Clip2Q9Z0H8 1047 aa8.09□□□□□ -1.12
Bdnf-201ENSMUST00000053317 Homer1Q9Z2Y3 366 aa8.09□□□□□ -1.12
Bdnf-201ENSMUST00000053317 CnpP16330 420 aa8.08□□□□□ -1.12
Bdnf-201ENSMUST00000053317 Rps12P63323 132 aaKnown RBP8.08□□□□□ -1.12
Bdnf-201ENSMUST00000053317 Bend4P86174 541 aa8.08□□□□□ -1.12
Bdnf-201ENSMUST00000053317 Nell2Q61220 819 aa8.08□□□□□ -1.12
Bdnf-201ENSMUST00000053317 Ube2oQ6ZPJ3 1288 aa8.08□□□□□ -1.12
Bdnf-201ENSMUST00000053317 Dpp8Q80YA7 892 aa8.08□□□□□ -1.12
Bdnf-201ENSMUST00000053317 GlmnQ8BZM1 596 aa8.08□□□□□ -1.12
Bdnf-201ENSMUST00000053317 Rfc4Q99J62 364 aa8.08□□□□□ -1.12
Bdnf-201ENSMUST00000053317 Flvcr1B2RXV4 560 aa8.08□□□□□ -1.12
Bdnf-201ENSMUST00000053317 Dnajb6O54946 365 aa8.08□□□□□ -1.12
Bdnf-201ENSMUST00000053317 Thrap3Q569Z6 951 aaKnown RBP8.08□□□□□ -1.12
Bdnf-201ENSMUST00000053317 Krt40Q6IFX3 439 aa8.08□□□□□ -1.12
Bdnf-201ENSMUST00000053317 Spata21Q8BHW6 681 aa8.08□□□□□ -1.12
Bdnf-201ENSMUST00000053317 Fbxo3Q9DC63 480 aa8.08□□□□□ -1.12
Bdnf-201ENSMUST00000053317 Arrdc4A0A0B4J1F4 415 aa8.08□□□□□ -1.12
Bdnf-201ENSMUST00000053317 Palm3A2TJV2 734 aa8.08□□□□□ -1.12
Retrieved 100 of 22,080 RNA–protein pairs in 21.8 ms