RNA–Protein interactions for RNA: ENSMUST00000044166.8

Cdc40-201, Transcript of Pre-mRNA-processing factor 17, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cdc40, Length 3,534 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40-201ENSMUST00000044166 Acot9Q9R0X4 439 aaKnown RBP9.43□□□□□ -0.9
Cdc40-201ENSMUST00000044166 Wdr19Q3UGF1 1341 aa9.43□□□□□ -0.9
Cdc40-201ENSMUST00000044166 Gm29094F6Q785 221 aa9.43□□□□□ -0.9
Cdc40-201ENSMUST00000044166 Ccng2O08918 344 aa9.43□□□□□ -0.9
Cdc40-201ENSMUST00000044166 LtkP08923 888 aa9.43□□□□□ -0.9
Cdc40-201ENSMUST00000044166 NefhP19246 1090 aa9.43□□□□□ -0.9
Cdc40-201ENSMUST00000044166 G3bp2P97379 482 aaKnown RBP9.43□□□□□ -0.9
Cdc40-201ENSMUST00000044166 Ric8aQ3TIR3 530 aa9.43□□□□□ -0.9
Cdc40-201ENSMUST00000044166 Gnat3Q3V3I2 354 aa9.43□□□□□ -0.9
Cdc40-201ENSMUST00000044166 Cep131Q62036 1060 aa9.43□□□□□ -0.9
Cdc40-201ENSMUST00000044166 Spty2d1Q68FG3 682 aa9.43□□□□□ -0.9
Cdc40-201ENSMUST00000044166 Ankib1Q6ZPS6 1085 aa9.43□□□□□ -0.9
Cdc40-201ENSMUST00000044166 Tmco3Q8BH01 678 aa9.43□□□□□ -0.9
Cdc40-201ENSMUST00000044166 Fam163bQ8BUM6 167 aa9.43□□□□□ -0.9
Cdc40-201ENSMUST00000044166 MthfsQ9D110 203 aa9.43□□□□□ -0.9
Cdc40-201ENSMUST00000044166 LratQ9JI60 231 aa9.43□□□□□ -0.9
Cdc40-201ENSMUST00000044166 Myo3bQ1EG27 1305 aa9.43□□□□□ -0.9
Cdc40-201ENSMUST00000044166 Sycp2lA0A0M3U1B0 842 aa9.43□□□□□ -0.9
Cdc40-201ENSMUST00000044166 Ccdc191J3QQ27 883 aa9.43□□□□□ -0.9
Cdc40-201ENSMUST00000044166 Myo1bP46735 1107 aa9.43□□□□□ -0.9
Cdc40-201ENSMUST00000044166 Washc4Q3UMB9 1173 aa9.43□□□□□ -0.9
Cdc40-201ENSMUST00000044166 Ripor2Q80U16 1078 aa9.43□□□□□ -0.9
Cdc40-201ENSMUST00000044166 Def6Q8C2K1 630 aa9.43□□□□□ -0.9
Cdc40-201ENSMUST00000044166 Nat10Q8K224 1024 aaKnown RBP9.43□□□□□ -0.9
Cdc40-201ENSMUST00000044166 Pdia6Q922R8 440 aaKnown RBP9.43□□□□□ -0.9
Cdc40-201ENSMUST00000044166 Cep89Q9CZX2 791 aa9.43□□□□□ -0.9
Cdc40-201ENSMUST00000044166 Riok3Q9DBU3 519 aaKnown RBP9.43□□□□□ -0.9
Cdc40-201ENSMUST00000044166 Ddx60E9PZQ1 1711 aa9.42□□□□□ -0.9
Cdc40-201ENSMUST00000044166 Diaph1O08808 1255 aa9.42□□□□□ -0.9
Cdc40-201ENSMUST00000044166 Cyp2d10P24456 504 aa9.42□□□□□ -0.9
Cdc40-201ENSMUST00000044166 Igfbp6P47880 238 aa9.42□□□□□ -0.9
Cdc40-201ENSMUST00000044166 Foxd1Q61345 456 aa9.42□□□□□ -0.9
Cdc40-201ENSMUST00000044166 Ddx58Q6Q899 926 aa9.42□□□□□ -0.9
Cdc40-201ENSMUST00000044166 IqcgQ80W32 419 aa9.42□□□□□ -0.9
Cdc40-201ENSMUST00000044166 Prkag3Q8BGM7 489 aa9.42□□□□□ -0.9
Cdc40-201ENSMUST00000044166 Ehd2Q8BH64 543 aa9.42□□□□□ -0.9
Cdc40-201ENSMUST00000044166 Efcab8Q8C9R9 203 aa9.42□□□□□ -0.9
Cdc40-201ENSMUST00000044166 TefQ9JLC6 301 aa9.42□□□□□ -0.9
Cdc40-201ENSMUST00000044166 DonsonQ9QXP4 560 aa9.42□□□□□ -0.9
Cdc40-201ENSMUST00000044166 Ttll7A4Q9F0 912 aa9.42□□□□□ -0.9
Cdc40-201ENSMUST00000044166 Cyp2d34L7N463 504 aa9.42□□□□□ -0.9
Cdc40-201ENSMUST00000044166 Impdh2P24547 514 aa9.42□□□□□ -0.9
Cdc40-201ENSMUST00000044166 Cd209bQ8CJ91 325 aa9.42□□□□□ -0.9
Cdc40-201ENSMUST00000044166 Alg3Q8K2A8 438 aa9.42□□□□□ -0.9
Cdc40-201ENSMUST00000044166 Psmd2Q8VDM4 908 aa9.42□□□□□ -0.9
Cdc40-201ENSMUST00000044166 Chmp3Q9CQ10 224 aa9.42□□□□□ -0.9
Cdc40-201ENSMUST00000044166 Dnajc10Q9DC23 793 aa9.42□□□□□ -0.9
Cdc40-201ENSMUST00000044166 Sos2Q02384 1333 aa9.42□□□□□ -0.9
Cdc40-201ENSMUST00000044166 Ankrd35E9Q9D8 996 aa9.42□□□□□ -0.9
Cdc40-201ENSMUST00000044166 Nat1P50294 290 aa9.42□□□□□ -0.9
Cdc40-201ENSMUST00000044166 Cplx1P63040 134 aa9.42□□□□□ -0.9
Cdc40-201ENSMUST00000044166 Cnnm1Q0GA42 951 aa9.42□□□□□ -0.9
Cdc40-201ENSMUST00000044166 Iqsec3Q3TES0 1195 aa9.42□□□□□ -0.9
Cdc40-201ENSMUST00000044166 NfkbibQ60778 359 aa9.42□□□□□ -0.9
Cdc40-201ENSMUST00000044166 Npdc1Q64322 332 aa9.42□□□□□ -0.9
Cdc40-201ENSMUST00000044166 Soga3Q6NZL0 945 aa9.42□□□□□ -0.9
Cdc40-201ENSMUST00000044166 Klhl30Q8C3F7 581 aa9.42□□□□□ -0.9
Cdc40-201ENSMUST00000044166 Rdm1Q9CQK3 281 aa9.42□□□□□ -0.9
Cdc40-201ENSMUST00000044166 Large1Q9Z1M7 756 aa9.42□□□□□ -0.9
Cdc40-201ENSMUST00000044166 Sall1Q9ER74 1322 aa9.41□□□□□ -0.9
Cdc40-201ENSMUST00000044166 Col22a1E9Q7P1 1613 aa9.41□□□□□ -0.9
Cdc40-201ENSMUST00000044166 Dnajc25A2ALW5 357 aa9.41□□□□□ -0.9
Cdc40-201ENSMUST00000044166 Usp13Q5BKP2 858 aa9.41□□□□□ -0.9
Cdc40-201ENSMUST00000044166 Brsk2Q69Z98 735 aa9.41□□□□□ -0.9
Cdc40-201ENSMUST00000044166 Cep55Q8BT07 462 aa9.41□□□□□ -0.9
Cdc40-201ENSMUST00000044166 Rbm17Q8JZX4 405 aaKnown RBP9.41□□□□□ -0.9
Cdc40-201ENSMUST00000044166 Nek9Q8K1R7 984 aa9.41□□□□□ -0.9
Cdc40-201ENSMUST00000044166 Krt25Q8VCW2 446 aa9.41□□□□□ -0.9
Cdc40-201ENSMUST00000044166 Atp12aQ9Z1W8 1035 aa9.41□□□□□ -0.9
Cdc40-201ENSMUST00000044166 Npc1l1Q6T3U4 1333 aa9.41□□□□□ -0.9
Cdc40-201ENSMUST00000044166 Prl3d3A0A0M6L0J6 224 aa9.41□□□□□ -0.9
Cdc40-201ENSMUST00000044166 Vmn2r23E9PXI5 849 aa9.41□□□□□ -0.9
Cdc40-201ENSMUST00000044166 Sult6b1P0CC03 303 aa9.41□□□□□ -0.9
Cdc40-201ENSMUST00000044166 Cep126Q0VBV7 1103 aa9.41□□□□□ -0.9
Cdc40-201ENSMUST00000044166 Mpp4Q6P7F1 635 aa9.41□□□□□ -0.9
Cdc40-201ENSMUST00000044166 Znf653Q6YND2 615 aa9.41□□□□□ -0.9
Cdc40-201ENSMUST00000044166 Shank2Q80Z38 1476 aa9.4□□□□□ -0.9
Cdc40-201ENSMUST00000044166 Cnbd1B1AWM0 430 aa9.4□□□□□ -0.9
Cdc40-201ENSMUST00000044166 Cep120Q7TSG1 988 aa9.4□□□□□ -0.9
Cdc40-201ENSMUST00000044166 Suds3Q8BR65 328 aa9.4□□□□□ -0.9
Cdc40-201ENSMUST00000044166 Chmp7Q8R1T1 451 aa9.4□□□□□ -0.9
Cdc40-201ENSMUST00000044166 AmotQ8VHG2 1126 aa9.4□□□□□ -0.9
Cdc40-201ENSMUST00000044166 Ctnnbl1Q9CWL8 563 aaKnown RBP9.4□□□□□ -0.9
Cdc40-201ENSMUST00000044166 MypnQ5DTJ9 1315 aa9.4□□□□□ -0.9
Cdc40-201ENSMUST00000044166 Rsrc2A2RTL5 376 aaKnown RBP9.4□□□□□ -0.9
Cdc40-201ENSMUST00000044166 Gm10471E9Q1C7 252 aa9.4□□□□□ -0.9
Cdc40-201ENSMUST00000044166 Hspa2P17156 633 aa9.4□□□□□ -0.9
Cdc40-201ENSMUST00000044166 Timm10P62073 90 aa9.4□□□□□ -0.9
Cdc40-201ENSMUST00000044166 Pald1P70261 859 aa9.4□□□□□ -0.9
Cdc40-201ENSMUST00000044166 Hand2Q61039 217 aa9.4□□□□□ -0.9
Cdc40-201ENSMUST00000044166 Prpf4bQ61136 1007 aaKnown RBP9.4□□□□□ -0.9
Cdc40-201ENSMUST00000044166 Fkbp5Q64378 456 aa9.4□□□□□ -0.9
Cdc40-201ENSMUST00000044166 Iqcb1Q8BP00 598 aa9.4□□□□□ -0.9
Cdc40-201ENSMUST00000044166 Pdzd9Q9D9M4 266 aa9.4□□□□□ -0.9
Cdc40-201ENSMUST00000044166 Slit1Q80TR4 1531 aa9.4□□□□□ -0.9
Cdc40-201ENSMUST00000044166 GclcP97494 637 aa9.4□□□□□ -0.91
Cdc40-201ENSMUST00000044166 Fbxo41Q6NS60 873 aa9.4□□□□□ -0.91
Cdc40-201ENSMUST00000044166 Prkab2Q6PAM0 271 aa9.4□□□□□ -0.91
Cdc40-201ENSMUST00000044166 Tpcn2Q8BWC0 731 aa9.4□□□□□ -0.91
Cdc40-201ENSMUST00000044166 Fsd2Q8BZ52 692 aa9.4□□□□□ -0.91
Retrieved 100 of 22,080 RNA–protein pairs in 24.3 ms