RNA–Protein interactions for RNA: ENSMUST00000041643.3

Pcif1-201, Transcript of Phosphorylated CTD-interacting factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcif1, Length 5,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1-201ENSMUST00000041643 P4ha1Q60715 534 aa13.52□□□□□ -0.25
Pcif1-201ENSMUST00000041643 Luc7l2Q7TNC4 392 aaKnown RBP13.52□□□□□ -0.25
Pcif1-201ENSMUST00000041643 Q8C6G1 249 aa13.52□□□□□ -0.25
Pcif1-201ENSMUST00000041643 Plcb3P51432 1234 aaKnown RBP13.51□□□□□ -0.25
Pcif1-201ENSMUST00000041643 Exoc8Q6PGF7 716 aa13.51□□□□□ -0.25
Pcif1-201ENSMUST00000041643 Ino80Q6ZPV2 1559 aa13.51□□□□□ -0.25
Pcif1-201ENSMUST00000041643 Ripor2Q80U16 1078 aa13.51□□□□□ -0.25
Pcif1-201ENSMUST00000041643 IqcgQ80W32 419 aa13.51□□□□□ -0.25
Pcif1-201ENSMUST00000041643 Rbm33Q9CXK9 1231 aaKnown RBP13.51□□□□□ -0.25
Pcif1-201ENSMUST00000041643 Col15a1O35206 1367 aa13.51□□□□□ -0.25
Pcif1-201ENSMUST00000041643 Zbtb7aO88939 569 aaKnown RBP13.51□□□□□ -0.25
Pcif1-201ENSMUST00000041643 Ccdc191J3QQ27 883 aa13.51□□□□□ -0.25
Pcif1-201ENSMUST00000041643 Hexim1Q8R409 356 aaKnown RBP13.51□□□□□ -0.25
Pcif1-201ENSMUST00000041643 Gm45015A0A140LII9 184 aa13.5□□□□□ -0.25
Pcif1-201ENSMUST00000041643 Gm18336A0A140LIU8 765 aa13.5□□□□□ -0.25
Pcif1-201ENSMUST00000041643 Ugt1a5B2RT14 529 aa13.5□□□□□ -0.25
Pcif1-201ENSMUST00000041643 Tyro3P55144 880 aa13.5□□□□□ -0.25
Pcif1-201ENSMUST00000041643 Gm28047Q3US59 414 aa13.5□□□□□ -0.25
Pcif1-201ENSMUST00000041643 Kif22Q3V300 660 aa13.5□□□□□ -0.25
Pcif1-201ENSMUST00000041643 Ankrd40Q5SUE8 363 aa13.5□□□□□ -0.25
Pcif1-201ENSMUST00000041643 Iqsec2Q5DU25 1478 aa13.5□□□□□ -0.25
Pcif1-201ENSMUST00000041643 Abcc4E9Q236 1325 aa13.5□□□□□ -0.25
Pcif1-201ENSMUST00000041643 Trim25Q61510 634 aaKnown RBP13.5□□□□□ -0.25
Pcif1-201ENSMUST00000041643 Rbm10Q99KG3 930 aaKnown RBP13.5□□□□□ -0.25
Pcif1-201ENSMUST00000041643 Ccdc129Q14B48 1034 aa13.5□□□□□ -0.25
Pcif1-201ENSMUST00000041643 AdpgkQ8VDL4 496 aa13.5□□□□□ -0.25
Pcif1-201ENSMUST00000041643 Emilin1Q99K41 1017 aa13.5□□□□□ -0.25
Pcif1-201ENSMUST00000041643 Glt1d1A4FUP9 346 aa13.5□□□□□ -0.25
Pcif1-201ENSMUST00000041643 Pde11aP0C1Q2 933 aa13.5□□□□□ -0.25
Pcif1-201ENSMUST00000041643 Ift88Q61371 824 aa13.5□□□□□ -0.25
Pcif1-201ENSMUST00000041643 Kcnh4A2A5F7 1018 aa13.49□□□□□ -0.25
Pcif1-201ENSMUST00000041643 Ano10Q8BH79 659 aa13.49□□□□□ -0.25
Pcif1-201ENSMUST00000041643 Otud6bQ8K2H2 294 aa13.49□□□□□ -0.25
Pcif1-201ENSMUST00000041643 Azi2Q9QYP6 405 aa13.49□□□□□ -0.25
Pcif1-201ENSMUST00000041643 Gm4758L7N258 96 aa13.49□□□□□ -0.25
Pcif1-201ENSMUST00000041643 Ipo4Q8VI75 1082 aa13.49□□□□□ -0.25
Pcif1-201ENSMUST00000041643 Syt10Q9R0N4 523 aa13.49□□□□□ -0.25
Pcif1-201ENSMUST00000041643 Pex1Q5BL07 1284 aa13.49□□□□□ -0.25
Pcif1-201ENSMUST00000041643 Exoc1Q8R3S6 894 aa13.49□□□□□ -0.25
Pcif1-201ENSMUST00000041643 Cd248Q91V98 765 aa13.49□□□□□ -0.25
Pcif1-201ENSMUST00000041643 Popdc2Q9ES82 367 aa13.49□□□□□ -0.25
Pcif1-201ENSMUST00000041643 TxlnbQ8VBT1 685 aa13.49□□□□□ -0.25
Pcif1-201ENSMUST00000041643 Trmt44Q9D2Q2 713 aa13.49□□□□□ -0.25
Pcif1-201ENSMUST00000041643 Eya3P97480 510 aa13.49□□□□□ -0.25
Pcif1-201ENSMUST00000041643 Cdca7lQ922M5 438 aa13.49□□□□□ -0.25
Pcif1-201ENSMUST00000041643 Cabp5Q9JLK3 173 aa13.49□□□□□ -0.25
Pcif1-201ENSMUST00000041643 Pagr1bF6V0H0 108 aa13.48□□□□□ -0.25
Pcif1-201ENSMUST00000041643 Pagr1aQ99L02 253 aa13.48□□□□□ -0.25
Pcif1-201ENSMUST00000041643 Kcnj14Q8JZN3 434 aa13.48□□□□□ -0.25
Pcif1-201ENSMUST00000041643 Hip1rQ9JKY5 1068 aa13.48□□□□□ -0.25
Pcif1-201ENSMUST00000041643 Anp32eP97822 260 aaKnown RBP13.48□□□□□ -0.25
Pcif1-201ENSMUST00000041643 Pls1Q3V0K9 630 aa13.48□□□□□ -0.25
Pcif1-201ENSMUST00000041643 Cyp26a1O55127 497 aa13.48□□□□□ -0.25
Pcif1-201ENSMUST00000041643 Nap1l4Q78ZA7 375 aaKnown RBP13.48□□□□□ -0.25
Pcif1-201ENSMUST00000041643 Cyp4f39Q8BGU0 532 aa13.48□□□□□ -0.25
Pcif1-201ENSMUST00000041643 Erlin2Q8BFZ9 340 aa13.47□□□□□ -0.25
Pcif1-201ENSMUST00000041643 Klhl30Q8C3F7 581 aa13.47□□□□□ -0.25
Pcif1-201ENSMUST00000041643 Sept14Q9DA97 430 aa13.47□□□□□ -0.25
Pcif1-201ENSMUST00000041643 Cetn1P41209 172 aa13.47□□□□□ -0.25
Pcif1-201ENSMUST00000041643 Pkp1P97350 728 aaKnown RBP13.47□□□□□ -0.25
Pcif1-201ENSMUST00000041643 Mtmr2Q9Z2D1 643 aa13.47□□□□□ -0.25
Pcif1-201ENSMUST00000041643 Med23Q80YQ2 1367 aa13.47□□□□□ -0.25
Pcif1-201ENSMUST00000041643 Prkg1P0C605 671 aa13.47□□□□□ -0.25
Pcif1-201ENSMUST00000041643 SsbP32067 415 aaKnown RBP13.47□□□□□ -0.25
Pcif1-201ENSMUST00000041643 Calml3Q9D6P8 149 aa13.47□□□□□ -0.25
Pcif1-201ENSMUST00000041643 Tfcp2Q9ERA0 502 aa13.47□□□□□ -0.25
Pcif1-201ENSMUST00000041643 MypnQ5DTJ9 1315 aa13.47□□□□□ -0.25
Pcif1-201ENSMUST00000041643 Wdr93Q402B2 695 aa13.47□□□□□ -0.25
Pcif1-201ENSMUST00000041643 Olfr118Q7TRJ6 321 aa13.47□□□□□ -0.25
Pcif1-201ENSMUST00000041643 Cyp3a57D3YYZ0 503 aa13.47□□□□□ -0.25
Pcif1-201ENSMUST00000041643 PparaP23204 468 aa13.47□□□□□ -0.25
Pcif1-201ENSMUST00000041643 Leo1Q5XJE5 667 aa13.47□□□□□ -0.25
Pcif1-201ENSMUST00000041643 Ncapg2Q6DFV1 1138 aa13.47□□□□□ -0.25
Pcif1-201ENSMUST00000041643 Chd1lQ9CXF7 900 aa13.47□□□□□ -0.25
Pcif1-201ENSMUST00000041643 Mipol1Q9D9F8 279 aa13.47□□□□□ -0.25
Pcif1-201ENSMUST00000041643 Fam83bQ0VBM2 1012 aa13.46□□□□□ -0.25
Pcif1-201ENSMUST00000041643 Ppp2r5bQ6PD28 497 aa13.46□□□□□ -0.25
Pcif1-201ENSMUST00000041643 Stac3Q8BZ71 360 aa13.46□□□□□ -0.25
Pcif1-201ENSMUST00000041643 Lzts2Q91YU6 671 aa13.46□□□□□ -0.25
Pcif1-201ENSMUST00000041643 NapaQ9DB05 295 aa13.46□□□□□ -0.25
Pcif1-201ENSMUST00000041643 Mroh6V9GX81 722 aa13.46□□□□□ -0.25
Pcif1-201ENSMUST00000041643 Nrxn1Q9CS84 1514 aa13.46□□□□□ -0.25
Pcif1-201ENSMUST00000041643 Armc2Q3URY6 854 aa13.46□□□□□ -0.25
Pcif1-201ENSMUST00000041643 Rnf34Q99KR6 376 aa13.46□□□□□ -0.25
Pcif1-201ENSMUST00000041643 Hs6st3Q9QYK4 470 aa13.46□□□□□ -0.25
Pcif1-201ENSMUST00000041643 Parp14Q2EMV9 1817 aa13.46□□□□□ -0.25
Pcif1-201ENSMUST00000041643 Arhgap33Q80YF9 1305 aa13.46□□□□□ -0.25
Pcif1-201ENSMUST00000041643 Dpp7Q9ET22 506 aa13.46□□□□□ -0.26
Pcif1-201ENSMUST00000041643 Zscan18E9PUD6 809 aa13.45□□□□□ -0.26
Pcif1-201ENSMUST00000041643 Oxr1Q4KMM3 866 aa13.45□□□□□ -0.26
Pcif1-201ENSMUST00000041643 ErmnQ5EBJ4 281 aa13.45□□□□□ -0.26
Pcif1-201ENSMUST00000041643 Znf219Q6IQX8 726 aa13.45□□□□□ -0.26
Pcif1-201ENSMUST00000041643 Dpp8Q80YA7 892 aa13.45□□□□□ -0.26
Pcif1-201ENSMUST00000041643 Kiaa1211Q5PR69 1207 aa13.45□□□□□ -0.26
Pcif1-201ENSMUST00000041643 Taok2Q6ZQ29 1240 aa13.45□□□□□ -0.26
Pcif1-201ENSMUST00000041643 Kiaa1524Q8BWY9 907 aa13.45□□□□□ -0.26
Pcif1-201ENSMUST00000041643 Uba5Q8VE47 403 aa13.45□□□□□ -0.26
Pcif1-201ENSMUST00000041643 Tbc1d4Q8BYJ6 1307 aa13.45□□□□□ -0.26
Pcif1-201ENSMUST00000041643 Tbc1d2B1AVH7 922 aa13.45□□□□□ -0.26
Pcif1-201ENSMUST00000041643 Vmn2r68L7N2B3 851 aa13.45□□□□□ -0.26
Retrieved 100 of 22,080 RNA–protein pairs in 19.2 ms