RNA–Protein interactions for RNA: ENSMUST00000040182.12

Ccdc88a-201, Transcript of Girdin, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ccdc88a, Length 9,376 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-201ENSMUST00000040182 Atp8b2P98199 1209 aa18.48■□□□□ 0.55
Ccdc88a-201ENSMUST00000040182 Cnga4Q3UW12 575 aa18.48■□□□□ 0.55
Ccdc88a-201ENSMUST00000040182 Tshz3Q8CGV9 1081 aa18.48■□□□□ 0.55
Ccdc88a-201ENSMUST00000040182 Pprc1Q6NZN1 1644 aa18.48■□□□□ 0.55
Ccdc88a-201ENSMUST00000040182 Slc27a3O88561 667 aa18.48■□□□□ 0.55
Ccdc88a-201ENSMUST00000040182 Plcd1Q8R3B1 756 aa18.48■□□□□ 0.55
Ccdc88a-201ENSMUST00000040182 Tex19.1Q99MV2 351 aa18.48■□□□□ 0.55
Ccdc88a-201ENSMUST00000040182 Prpf31Q8CCF0 499 aaKnown RBP18.48■□□□□ 0.55
Ccdc88a-201ENSMUST00000040182 Sugp2Q8CH09 1067 aa18.48■□□□□ 0.55
Ccdc88a-201ENSMUST00000040182 Exoc5Q3TPX4 708 aa18.48■□□□□ 0.55
Ccdc88a-201ENSMUST00000040182 Ifit1bl2Q3U687 466 aa18.48■□□□□ 0.55
Ccdc88a-201ENSMUST00000040182 Gas2l2Q5SSG4 860 aa18.48■□□□□ 0.55
Ccdc88a-201ENSMUST00000040182 Leo1Q5XJE5 667 aa18.48■□□□□ 0.55
Ccdc88a-201ENSMUST00000040182 Znf830Q8R1N0 363 aaKnown RBP18.48■□□□□ 0.55
Ccdc88a-201ENSMUST00000040182 Ifit2Q64112 472 aa18.48■□□□□ 0.55
Ccdc88a-201ENSMUST00000040182 Clec11aO88200 328 aa18.47■□□□□ 0.55
Ccdc88a-201ENSMUST00000040182 Mybpc2Q5XKE0 1136 aa18.47■□□□□ 0.55
Ccdc88a-201ENSMUST00000040182 Ttc14Q9CSP9 761 aa18.47■□□□□ 0.55
Ccdc88a-201ENSMUST00000040182 Trappc8E9PWG2 1437 aa18.47■□□□□ 0.55
Ccdc88a-201ENSMUST00000040182 Apbb1ipQ8R5A3 670 aa18.47■□□□□ 0.55
Ccdc88a-201ENSMUST00000040182 Dcaf17Q3TUL7 519 aa18.47■□□□□ 0.55
Ccdc88a-201ENSMUST00000040182 Ccdc175E9PVB3 822 aa18.46■□□□□ 0.55
Ccdc88a-201ENSMUST00000040182 Kif5aP33175 1027 aa18.46■□□□□ 0.55
Ccdc88a-201ENSMUST00000040182 Ak2Q9WTP6 239 aa18.46■□□□□ 0.55
Ccdc88a-201ENSMUST00000040182 Pdcd6ipQ9WU78 869 aaKnown RBP18.46■□□□□ 0.55
Ccdc88a-201ENSMUST00000040182 Cd72P21855 354 aa18.46■□□□□ 0.55
Ccdc88a-201ENSMUST00000040182 Krit1Q6S5J6 736 aa18.46■□□□□ 0.55
Ccdc88a-201ENSMUST00000040182 Rbm19Q8R3C6 952 aaKnown RBP18.46■□□□□ 0.55
Ccdc88a-201ENSMUST00000040182 Tmem143Q8VD26 458 aa18.46■□□□□ 0.55
Ccdc88a-201ENSMUST00000040182 Cyp2ab1S4R196 498 aa18.46■□□□□ 0.55
Ccdc88a-201ENSMUST00000040182 Osbpl5Q9ER64 874 aa18.46■□□□□ 0.55
Ccdc88a-201ENSMUST00000040182 Ssh2Q5SW75 1423 aa18.46■□□□□ 0.55
Ccdc88a-201ENSMUST00000040182 Bmp2kQ91Z96 1138 aa18.46■□□□□ 0.55
Ccdc88a-201ENSMUST00000040182 Edc4Q3UJB9 1406 aaKnown RBP18.46■□□□□ 0.55
Ccdc88a-201ENSMUST00000040182 LdhaP06151 332 aaKnown RBP18.46■□□□□ 0.54
Ccdc88a-201ENSMUST00000040182 Trim7Q923T7 510 aa18.46■□□□□ 0.54
Ccdc88a-201ENSMUST00000040182 Tekt3Q6X6Z7 490 aa18.45■□□□□ 0.54
Ccdc88a-201ENSMUST00000040182 Dph6Q9CQ28 267 aa18.45■□□□□ 0.54
Ccdc88a-201ENSMUST00000040182 Cep152A2AUM9 1736 aaKnown RBP18.45■□□□□ 0.54
Ccdc88a-201ENSMUST00000040182 Prim1P20664 417 aa18.45■□□□□ 0.54
Ccdc88a-201ENSMUST00000040182 Tti2Q8BGV4 512 aa18.45■□□□□ 0.54
Ccdc88a-201ENSMUST00000040182 Tmem87aQ8BXN9 555 aa18.45■□□□□ 0.54
Ccdc88a-201ENSMUST00000040182 Spata16Q8C636 571 aa18.45■□□□□ 0.54
Ccdc88a-201ENSMUST00000040182 Pih1h3bQ8C6P5 218 aa18.45■□□□□ 0.54
Ccdc88a-201ENSMUST00000040182 Nup58Q8R332 587 aa18.45■□□□□ 0.54
Ccdc88a-201ENSMUST00000040182 Zbtb16Q3UQ17 673 aa18.45■□□□□ 0.54
Ccdc88a-201ENSMUST00000040182 Gm5168Q4KL04 211 aa18.45■□□□□ 0.54
Ccdc88a-201ENSMUST00000040182 Glg1Q61543 1175 aaKnown RBP18.45■□□□□ 0.54
Ccdc88a-201ENSMUST00000040182 Morc2aQ69ZX6 1030 aa18.45■□□□□ 0.54
Ccdc88a-201ENSMUST00000040182 Kdm4cQ8VCD7 1054 aa18.45■□□□□ 0.54
Ccdc88a-201ENSMUST00000040182 Adcy10Q8C0T9 1614 aa18.45■□□□□ 0.54
Ccdc88a-201ENSMUST00000040182 Snapc4Q8BP86 1333 aa18.45■□□□□ 0.54
Ccdc88a-201ENSMUST00000040182 Taf4E9QAP7 1042 aaKnown RBP18.45■□□□□ 0.54
Ccdc88a-201ENSMUST00000040182 PhbP67778 272 aaKnown RBP18.45■□□□□ 0.54
Ccdc88a-201ENSMUST00000040182 Zranb1Q7M760 708 aa18.45■□□□□ 0.54
Ccdc88a-201ENSMUST00000040182 Ccdc82Q6PG04 518 aa18.45■□□□□ 0.54
Ccdc88a-201ENSMUST00000040182 Ccdc155Q80VJ8 648 aa18.45■□□□□ 0.54
Ccdc88a-201ENSMUST00000040182 Pdzd4Q9QY39 772 aa18.45■□□□□ 0.54
Ccdc88a-201ENSMUST00000040182 Spocd1B1ASB6 936 aa18.44■□□□□ 0.54
Ccdc88a-201ENSMUST00000040182 Tuft1O08970 390 aa18.44■□□□□ 0.54
Ccdc88a-201ENSMUST00000040182 ByslO54825 436 aaKnown RBP18.44■□□□□ 0.54
Ccdc88a-201ENSMUST00000040182 Terf2ipQ91VL8 393 aa18.44■□□□□ 0.54
Ccdc88a-201ENSMUST00000040182 A0A1W2P7S8 802 aa18.44■□□□□ 0.54
Ccdc88a-201ENSMUST00000040182 Wdr93Q402B2 695 aa18.44■□□□□ 0.54
Ccdc88a-201ENSMUST00000040182 Cdc5lQ6A068 802 aaKnown RBP18.44■□□□□ 0.54
Ccdc88a-201ENSMUST00000040182 NapaQ9DB05 295 aa18.44■□□□□ 0.54
Ccdc88a-201ENSMUST00000040182 Pak1O88643 545 aa18.44■□□□□ 0.54
Ccdc88a-201ENSMUST00000040182 Lztfl1Q9JHQ5 299 aa18.44■□□□□ 0.54
Ccdc88a-201ENSMUST00000040182 Skor2A7M7C7 1008 aa18.44■□□□□ 0.54
Ccdc88a-201ENSMUST00000040182 Slc8a1P70414 970 aa18.44■□□□□ 0.54
Ccdc88a-201ENSMUST00000040182 Mum1l1Q4VA55 681 aa18.44■□□□□ 0.54
Ccdc88a-201ENSMUST00000040182 Tmtc2Q56A06 836 aa18.44■□□□□ 0.54
Ccdc88a-201ENSMUST00000040182 Myo6Q64331 1265 aa18.44■□□□□ 0.54
Ccdc88a-201ENSMUST00000040182 GckrQ91X44 587 aa18.44■□□□□ 0.54
Ccdc88a-201ENSMUST00000040182 Psmd6Q99JI4 389 aa18.44■□□□□ 0.54
Ccdc88a-201ENSMUST00000040182 Nip7Q9CXK8 180 aaKnown RBP18.44■□□□□ 0.54
Ccdc88a-201ENSMUST00000040182 Stk36Q69ZM6 1316 aa18.44■□□□□ 0.54
Ccdc88a-201ENSMUST00000040182 PalldQ9ET54 1408 aa18.44■□□□□ 0.54
Ccdc88a-201ENSMUST00000040182 Bpifb4A2BGH0 617 aa18.44■□□□□ 0.54
Ccdc88a-201ENSMUST00000040182 1700006A11RikB9EHI3 544 aa18.44■□□□□ 0.54
Ccdc88a-201ENSMUST00000040182 Rapgef1Q3UHC1 1224 aa18.44■□□□□ 0.54
Ccdc88a-201ENSMUST00000040182 Anp32cQ64G17 123 aa18.44■□□□□ 0.54
Ccdc88a-201ENSMUST00000040182 Asic2Q925H0 512 aa18.44■□□□□ 0.54
Ccdc88a-201ENSMUST00000040182 Mybl2P48972 704 aa18.44■□□□□ 0.54
Ccdc88a-201ENSMUST00000040182 Stat2Q9WVL2 923 aa18.44■□□□□ 0.54
Ccdc88a-201ENSMUST00000040182 Ier5O89113 308 aa18.43■□□□□ 0.54
Ccdc88a-201ENSMUST00000040182 Trim17Q7TPM3 477 aa18.43■□□□□ 0.54
Ccdc88a-201ENSMUST00000040182 HhatQ8BMT9 499 aa18.43■□□□□ 0.54
Ccdc88a-201ENSMUST00000040182 Parp10Q8CIE4 960 aa18.43■□□□□ 0.54
Ccdc88a-201ENSMUST00000040182 Kcnh3Q9WVJ0 1095 aa18.43■□□□□ 0.54
Ccdc88a-201ENSMUST00000040182 Uspl1Q3ULM6 1089 aa18.43■□□□□ 0.54
Ccdc88a-201ENSMUST00000040182 Clcn1Q64347 994 aa18.43■□□□□ 0.54
Ccdc88a-201ENSMUST00000040182 Stac3Q8BZ71 360 aa18.43■□□□□ 0.54
Ccdc88a-201ENSMUST00000040182 Gm5624F6ZZG8 207 aa18.43■□□□□ 0.54
Ccdc88a-201ENSMUST00000040182 Plcb3P51432 1234 aaKnown RBP18.43■□□□□ 0.54
Ccdc88a-201ENSMUST00000040182 Sh3tc1G3X9F6 1346 aa18.43■□□□□ 0.54
Ccdc88a-201ENSMUST00000040182 Nub1P54729 614 aa18.43■□□□□ 0.54
Ccdc88a-201ENSMUST00000040182 Mindy4Q3UQI9 744 aa18.43■□□□□ 0.54
Ccdc88a-201ENSMUST00000040182 Pde5aQ8CG03 865 aa18.43■□□□□ 0.54
Ccdc88a-201ENSMUST00000040182 Thap12Q9CUX1 758 aa18.43■□□□□ 0.54
Retrieved 100 of 22,080 RNA–protein pairs in 51.2 ms