RNA–Protein interactions for RNA: ENSMUST00000038514.14

Nup54-201, Transcript of Nuclear pore complex protein Nup54, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup54, Length 2,352 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54-201ENSMUST00000038514 Tcp11l1Q8BTG3 509 aa17.25■□□□□ 0.35
Nup54-201ENSMUST00000038514 Fam76aQ922G2 307 aa17.25■□□□□ 0.35
Nup54-201ENSMUST00000038514 Ube3bQ9ES34 1070 aa17.25■□□□□ 0.35
Nup54-201ENSMUST00000038514 Diaph1O08808 1255 aa17.25■□□□□ 0.35
Nup54-201ENSMUST00000038514 Plcb3P51432 1234 aaKnown RBP17.25■□□□□ 0.35
Nup54-201ENSMUST00000038514 Adam1aQ60813 791 aa17.25■□□□□ 0.35
Nup54-201ENSMUST00000038514 Med23Q80YQ2 1367 aa17.25■□□□□ 0.35
Nup54-201ENSMUST00000038514 Pnpla2Q8BJ56 486 aa17.25■□□□□ 0.35
Nup54-201ENSMUST00000038514 Stac3Q8BZ71 360 aa17.25■□□□□ 0.35
Nup54-201ENSMUST00000038514 Tada3Q8R0L9 432 aa17.25■□□□□ 0.35
Nup54-201ENSMUST00000038514 Arl8aQ8VEH3 186 aa17.25■□□□□ 0.35
Nup54-201ENSMUST00000038514 Sept12Q9D451 317 aa17.25■□□□□ 0.35
Nup54-201ENSMUST00000038514 Myh2G3UW82 1942 aa17.25■□□□□ 0.35
Nup54-201ENSMUST00000038514 PappaQ8R4K8 1624 aa17.24■□□□□ 0.35
Nup54-201ENSMUST00000038514 Myo1aO88329 1043 aa17.24■□□□□ 0.35
Nup54-201ENSMUST00000038514 Cyp19a1P28649 503 aa17.24■□□□□ 0.35
Nup54-201ENSMUST00000038514 Ric8aQ3TIR3 530 aa17.24■□□□□ 0.35
Nup54-201ENSMUST00000038514 Tbx2Q60707 711 aa17.24■□□□□ 0.35
Nup54-201ENSMUST00000038514 BcanQ61361 883 aa17.24■□□□□ 0.35
Nup54-201ENSMUST00000038514 Mns1Q61884 491 aa17.24■□□□□ 0.35
Nup54-201ENSMUST00000038514 Asnsd1Q8BFS9 627 aa17.24■□□□□ 0.35
Nup54-201ENSMUST00000038514 Brd3Q8K2F0 726 aaKnown RBP17.24■□□□□ 0.35
Nup54-201ENSMUST00000038514 CerkQ8K4Q7 531 aa17.24■□□□□ 0.35
Nup54-201ENSMUST00000038514 Gpr108Q91WD0 569 aa17.24■□□□□ 0.35
Nup54-201ENSMUST00000038514 Gtpbp4Q99ME9 634 aaKnown RBP17.24■□□□□ 0.35
Nup54-201ENSMUST00000038514 Kcnh3Q9WVJ0 1095 aa17.24■□□□□ 0.35
Nup54-201ENSMUST00000038514 Casp12O08736 419 aa17.23■□□□□ 0.35
Nup54-201ENSMUST00000038514 EmbP21995 330 aa17.23■□□□□ 0.35
Nup54-201ENSMUST00000038514 Cplx2P84086 134 aa17.23■□□□□ 0.35
Nup54-201ENSMUST00000038514 Slc7a1Q09143 622 aa17.23■□□□□ 0.35
Nup54-201ENSMUST00000038514 Tshz1Q5DTH5 1084 aa17.23■□□□□ 0.35
Nup54-201ENSMUST00000038514 Atf3Q60765 181 aa17.23■□□□□ 0.35
Nup54-201ENSMUST00000038514 Nlrp9aQ66X03 949 aa17.23■□□□□ 0.35
Nup54-201ENSMUST00000038514 Gnl2Q99LH1 728 aaKnown RBP17.23■□□□□ 0.35
Nup54-201ENSMUST00000038514 Mrps25Q9D125 171 aaKnown RBP17.23■□□□□ 0.35
Nup54-201ENSMUST00000038514 Zranb2Q9R020 330 aaKnown RBP17.23■□□□□ 0.35
Nup54-201ENSMUST00000038514 Lrp5Q91VN0 1614 aa17.23■□□□□ 0.35
Nup54-201ENSMUST00000038514 AW822073A0A0N4SUK1 652 aa17.23■□□□□ 0.35
Nup54-201ENSMUST00000038514 Epb41l2O70318 988 aaKnown RBP17.23■□□□□ 0.35
Nup54-201ENSMUST00000038514 Specc1lQ2KN98 1118 aaKnown RBP17.23■□□□□ 0.35
Nup54-201ENSMUST00000038514 Uri1Q3TLD5 531 aa17.23■□□□□ 0.35
Nup54-201ENSMUST00000038514 Washc4Q3UMB9 1173 aa17.23■□□□□ 0.35
Nup54-201ENSMUST00000038514 Slitrk3Q810B9 980 aa17.23■□□□□ 0.35
Nup54-201ENSMUST00000038514 Ppp2r2cQ8BG02 447 aa17.23■□□□□ 0.35
Nup54-201ENSMUST00000038514 Tbc1d7Q9D0K0 293 aa17.23■□□□□ 0.35
Nup54-201ENSMUST00000038514 Gm5624F6ZZG8 207 aa17.22■□□□□ 0.35
Nup54-201ENSMUST00000038514 Dpf2Q61103 391 aaKnown RBP17.22■□□□□ 0.35
Nup54-201ENSMUST00000038514 Phf20l1Q8CCJ9 1013 aa17.22■□□□□ 0.35
Nup54-201ENSMUST00000038514 GptQ8QZR5 496 aa17.22■□□□□ 0.35
Nup54-201ENSMUST00000038514 Sirt2Q8VDQ8 389 aa17.22■□□□□ 0.35
Nup54-201ENSMUST00000038514 Myh6Q02566 1938 aaKnown RBP17.22■□□□□ 0.35
Nup54-201ENSMUST00000038514 Prl3d1P18121 224 aa17.22■□□□□ 0.35
Nup54-201ENSMUST00000038514 Foxp1P58462 705 aa17.22■□□□□ 0.35
Nup54-201ENSMUST00000038514 Krt39Q6IFX4 482 aa17.22■□□□□ 0.35
Nup54-201ENSMUST00000038514 RbsnQ80Y56 783 aa17.22■□□□□ 0.35
Nup54-201ENSMUST00000038514 Klhl30Q8C3F7 581 aa17.22■□□□□ 0.35
Nup54-201ENSMUST00000038514 Ccdc150Q8CDI7 1110 aa17.22■□□□□ 0.35
Nup54-201ENSMUST00000038514 Mylk2Q8VCR8 613 aa17.22■□□□□ 0.35
Nup54-201ENSMUST00000038514 Pcdhgc5Q91XW9 944 aa17.22■□□□□ 0.35
Nup54-201ENSMUST00000038514 Riok1Q922Q2 567 aa17.22■□□□□ 0.35
Nup54-201ENSMUST00000038514 Ccdc47Q9D024 483 aaKnown RBP17.22■□□□□ 0.35
Nup54-201ENSMUST00000038514 Actn3O88990 900 aaKnown RBP17.21■□□□□ 0.35
Nup54-201ENSMUST00000038514 Luc7l2Q7TNC4 392 aaKnown RBP17.21■□□□□ 0.35
Nup54-201ENSMUST00000038514 Sptlc3Q8BG54 563 aa17.21■□□□□ 0.35
Nup54-201ENSMUST00000038514 Q8CEZ4 452 aa17.21■□□□□ 0.35
Nup54-201ENSMUST00000038514 Tubgcp2Q921G8 905 aa17.21■□□□□ 0.35
Nup54-201ENSMUST00000038514 Rcan1Q9JHG6 198 aa17.21■□□□□ 0.35
Nup54-201ENSMUST00000038514 Ankrd31A0A140LI88 1765 aa17.21■□□□□ 0.35
Nup54-201ENSMUST00000038514 Myl10Q62082 202 aa17.21■□□□□ 0.34
Nup54-201ENSMUST00000038514 Eaf2Q91ZD6 262 aa17.21■□□□□ 0.34
Nup54-201ENSMUST00000038514 AatfQ9JKX4 526 aaKnown RBP17.21■□□□□ 0.34
Nup54-201ENSMUST00000038514 Mast3Q3U214 1321 aa17.2■□□□□ 0.34
Nup54-201ENSMUST00000038514 Grin1P35438 938 aa17.2■□□□□ 0.34
Nup54-201ENSMUST00000038514 VmacQ8BP01 174 aa17.2■□□□□ 0.34
Nup54-201ENSMUST00000038514 Nek9Q8K1R7 984 aa17.2■□□□□ 0.34
Nup54-201ENSMUST00000038514 Zbtb21E9Q444 1094 aa17.2■□□□□ 0.34
Nup54-201ENSMUST00000038514 Gm10134F6ZQC6 126 aa17.2■□□□□ 0.34
Nup54-201ENSMUST00000038514 Ckap2Q3V1H1 664 aa17.2■□□□□ 0.34
Nup54-201ENSMUST00000038514 Bag1Q60739 355 aa17.2■□□□□ 0.34
Nup54-201ENSMUST00000038514 Znf653Q6YND2 615 aa17.2■□□□□ 0.34
Nup54-201ENSMUST00000038514 Krt84Q99M73 603 aa17.2■□□□□ 0.34
Nup54-201ENSMUST00000038514 Trim11Q99PQ2 467 aa17.2■□□□□ 0.34
Nup54-201ENSMUST00000038514 Cap2Q9CYT6 476 aa17.2■□□□□ 0.34
Nup54-201ENSMUST00000038514 Sept1P42209 366 aa17.19■□□□□ 0.34
Nup54-201ENSMUST00000038514 Tpm4Q6IRU2 248 aa17.19■□□□□ 0.34
Nup54-201ENSMUST00000038514 Txnrd1Q9JMH6 613 aa17.19■□□□□ 0.34
Nup54-201ENSMUST00000038514 Cers3Q1A3B0 383 aa17.18■□□□□ 0.34
Nup54-201ENSMUST00000038514 Clec16aQ80U30 1036 aa17.18■□□□□ 0.34
Nup54-201ENSMUST00000038514 Ctdspl2Q8BG15 465 aa17.18■□□□□ 0.34
Nup54-201ENSMUST00000038514 Maats1Q8BRC6 783 aa17.18■□□□□ 0.34
Nup54-201ENSMUST00000038514 Cbx6Q9DBY5 414 aa17.18■□□□□ 0.34
Nup54-201ENSMUST00000038514 Setdb1O88974 1307 aa17.18■□□□□ 0.34
Nup54-201ENSMUST00000038514 Cfap44E9Q5M6 1843 aa17.18■□□□□ 0.34
Nup54-201ENSMUST00000038514 Myh7bA2AQP0 1941 aa17.18■□□□□ 0.34
Nup54-201ENSMUST00000038514 Ampd3O08739 766 aa17.18■□□□□ 0.34
Nup54-201ENSMUST00000038514 Pla2g4bP0C871 782 aa17.18■□□□□ 0.34
Nup54-201ENSMUST00000038514 Plekhf1Q3TB82 279 aa17.18■□□□□ 0.34
Nup54-201ENSMUST00000038514 Olfr119Q7TRJ5 321 aa17.18■□□□□ 0.34
Nup54-201ENSMUST00000038514 Wdr3Q8BHB4 942 aaKnown RBP17.18■□□□□ 0.34
Nup54-201ENSMUST00000038514 Cd209bQ8CJ91 325 aa17.18■□□□□ 0.34
Retrieved 100 of 22,080 RNA–protein pairs in 42.3 ms