RNA–Protein interactions for RNA: ENSMUST00000022646.8

Nkx3-1-201, Transcript of Homeobox protein Nkx-3.1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nkx3-1, Length 3,195 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1-201ENSMUST00000022646 Krt24A1L317 512 aa17.38■□□□□ 0.37
Nkx3-1-201ENSMUST00000022646 Frmd3Q8BHD4 595 aa17.38■□□□□ 0.37
Nkx3-1-201ENSMUST00000022646 Suclg2Q9Z2I8 433 aa17.38■□□□□ 0.37
Nkx3-1-201ENSMUST00000022646 Frat1P70339 274 aa17.38■□□□□ 0.37
Nkx3-1-201ENSMUST00000022646 Prpf4bQ61136 1007 aaKnown RBP17.38■□□□□ 0.37
Nkx3-1-201ENSMUST00000022646 Foxp1P58462 705 aa17.38■□□□□ 0.37
Nkx3-1-201ENSMUST00000022646 Anks1aP59672 1150 aa17.38■□□□□ 0.37
Nkx3-1-201ENSMUST00000022646 Ube3cQ80U95 1083 aa17.38■□□□□ 0.37
Nkx3-1-201ENSMUST00000022646 IqcgQ80W32 419 aa17.38■□□□□ 0.37
Nkx3-1-201ENSMUST00000022646 Kri1Q8VDQ9 704 aaKnown RBP17.38■□□□□ 0.37
Nkx3-1-201ENSMUST00000022646 Grin2dQ03391 1323 aa17.37■□□□□ 0.37
Nkx3-1-201ENSMUST00000022646 U2af2P26369 475 aaKnown RBP17.37■□□□□ 0.37
Nkx3-1-201ENSMUST00000022646 Mtx1P47802 317 aa17.37■□□□□ 0.37
Nkx3-1-201ENSMUST00000022646 Slc44a1Q6X893 653 aa17.37■□□□□ 0.37
Nkx3-1-201ENSMUST00000022646 Miga2Q8BK03 593 aa17.37■□□□□ 0.37
Nkx3-1-201ENSMUST00000022646 FliiQ9JJ28 1271 aa17.37■□□□□ 0.37
Nkx3-1-201ENSMUST00000022646 Myh2G3UW82 1942 aa17.37■□□□□ 0.37
Nkx3-1-201ENSMUST00000022646 Slc4a4O88343 1079 aa17.37■□□□□ 0.37
Nkx3-1-201ENSMUST00000022646 Zbtb7aO88939 569 aaKnown RBP17.37■□□□□ 0.37
Nkx3-1-201ENSMUST00000022646 Slitrk3Q810B9 980 aa17.37■□□□□ 0.37
Nkx3-1-201ENSMUST00000022646 Fam13bQ8K2H3 851 aa17.37■□□□□ 0.37
Nkx3-1-201ENSMUST00000022646 Ankrd1Q9CR42 319 aa17.37■□□□□ 0.37
Nkx3-1-201ENSMUST00000022646 Frmd7A2AD83 703 aa17.36■□□□□ 0.37
Nkx3-1-201ENSMUST00000022646 Tmem87aQ8BXN9 555 aa17.36■□□□□ 0.37
Nkx3-1-201ENSMUST00000022646 Tmem143Q8VD26 458 aa17.36■□□□□ 0.37
Nkx3-1-201ENSMUST00000022646 Pold4Q9CWP8 107 aa17.36■□□□□ 0.37
Nkx3-1-201ENSMUST00000022646 MbipQ99LQ1 341 aa17.36■□□□□ 0.37
Nkx3-1-201ENSMUST00000022646 NenfQ9CQ45 171 aa17.36■□□□□ 0.37
Nkx3-1-201ENSMUST00000022646 Dapk3O54784 448 aa17.36■□□□□ 0.37
Nkx3-1-201ENSMUST00000022646 Cnnm2Q3TWN3 875 aa17.36■□□□□ 0.37
Nkx3-1-201ENSMUST00000022646 Znf568E9PYI1 671 aa17.35■□□□□ 0.37
Nkx3-1-201ENSMUST00000022646 Cep120Q7TSG1 988 aa17.35■□□□□ 0.37
Nkx3-1-201ENSMUST00000022646 Haus7Q8BKT8 364 aa17.35■□□□□ 0.37
Nkx3-1-201ENSMUST00000022646 Hps6Q8BLY7 805 aa17.35■□□□□ 0.37
Nkx3-1-201ENSMUST00000022646 Kcnj14Q8JZN3 434 aa17.35■□□□□ 0.37
Nkx3-1-201ENSMUST00000022646 Ginm1Q91WR6 327 aa17.35■□□□□ 0.37
Nkx3-1-201ENSMUST00000022646 Vnn1Q9Z0K8 512 aa17.35■□□□□ 0.37
Nkx3-1-201ENSMUST00000022646 Ifit1bl2Q3U687 466 aa17.35■□□□□ 0.37
Nkx3-1-201ENSMUST00000022646 Ckap2Q3V1H1 664 aa17.35■□□□□ 0.37
Nkx3-1-201ENSMUST00000022646 Prl2c1Q5SVL9 228 aa17.35■□□□□ 0.37
Nkx3-1-201ENSMUST00000022646 VmacQ8BP01 174 aa17.35■□□□□ 0.37
Nkx3-1-201ENSMUST00000022646 Casz1Q9CWL2 1761 aa17.34■□□□□ 0.37
Nkx3-1-201ENSMUST00000022646 Ythdc1E9Q5K9 736 aaKnown RBP17.34■□□□□ 0.37
Nkx3-1-201ENSMUST00000022646 Znf653Q6YND2 615 aa17.34■□□□□ 0.37
Nkx3-1-201ENSMUST00000022646 Filip1Q9CS72 1211 aa17.34■□□□□ 0.37
Nkx3-1-201ENSMUST00000022646 Cyp2c23E9Q5K4 494 aa17.34■□□□□ 0.37
Nkx3-1-201ENSMUST00000022646 Usp13Q5BKP2 858 aa17.34■□□□□ 0.37
Nkx3-1-201ENSMUST00000022646 Otud6bQ8K2H2 294 aa17.34■□□□□ 0.37
Nkx3-1-201ENSMUST00000022646 Cnpy3Q9DAU1 276 aa17.34■□□□□ 0.37
Nkx3-1-201ENSMUST00000022646 Sycp2lA0A0M3U1B0 842 aa17.34■□□□□ 0.37
Nkx3-1-201ENSMUST00000022646 Slc1a4O35874 532 aa17.34■□□□□ 0.37
Nkx3-1-201ENSMUST00000022646 Tnni2P13412 182 aa17.34■□□□□ 0.37
Nkx3-1-201ENSMUST00000022646 Glis3Q6XP49 780 aa17.34■□□□□ 0.37
Nkx3-1-201ENSMUST00000022646 Larp6Q8BN59 492 aa17.34■□□□□ 0.37
Nkx3-1-201ENSMUST00000022646 Tcp11l1Q8BTG3 509 aa17.34■□□□□ 0.37
Nkx3-1-201ENSMUST00000022646 Rtn1Q8K0T0 780 aa17.34■□□□□ 0.37
Nkx3-1-201ENSMUST00000022646 Evc2Q8K1G2 1220 aa17.34■□□□□ 0.37
Nkx3-1-201ENSMUST00000022646 WtapQ9ER69 396 aa17.34■□□□□ 0.37
Nkx3-1-201ENSMUST00000022646 Kcnh3Q9WVJ0 1095 aa17.34■□□□□ 0.37
Nkx3-1-201ENSMUST00000022646 Atp12aQ9Z1W8 1035 aa17.34■□□□□ 0.37
Nkx3-1-201ENSMUST00000022646 Ces1hD3Z298 562 aa17.33■□□□□ 0.37
Nkx3-1-201ENSMUST00000022646 Cd3dP04235 173 aa17.33■□□□□ 0.37
Nkx3-1-201ENSMUST00000022646 LtkP08923 888 aa17.33■□□□□ 0.37
Nkx3-1-201ENSMUST00000022646 Ms4a1P19437 291 aa17.33■□□□□ 0.37
Nkx3-1-201ENSMUST00000022646 Arhgef16Q3U5C8 713 aa17.33■□□□□ 0.37
Nkx3-1-201ENSMUST00000022646 Olfm5Q8BU90 496 aa17.33■□□□□ 0.37
Nkx3-1-201ENSMUST00000022646 Popdc2Q9ES82 367 aa17.33■□□□□ 0.37
Nkx3-1-201ENSMUST00000022646 Cfap44E9Q5M6 1843 aa17.33■□□□□ 0.36
Nkx3-1-201ENSMUST00000022646 Cbx1P83917 185 aaKnown RBP17.33■□□□□ 0.36
Nkx3-1-201ENSMUST00000022646 Znf496Q5SXI5 585 aa17.33■□□□□ 0.36
Nkx3-1-201ENSMUST00000022646 Sox30Q8CGW4 782 aa17.33■□□□□ 0.36
Nkx3-1-201ENSMUST00000022646 Paf1Q8K2T8 535 aa17.33■□□□□ 0.36
Nkx3-1-201ENSMUST00000022646 Efcc1Q9JJF6 558 aa17.33■□□□□ 0.36
Nkx3-1-201ENSMUST00000022646 GabrdP22933 449 aa17.32■□□□□ 0.36
Nkx3-1-201ENSMUST00000022646 Trim11Q99PQ2 467 aa17.32■□□□□ 0.36
Nkx3-1-201ENSMUST00000022646 Stag1Q9D3E6 1258 aa17.32■□□□□ 0.36
Nkx3-1-201ENSMUST00000022646 Rcan1Q9JHG6 198 aa17.32■□□□□ 0.36
Nkx3-1-201ENSMUST00000022646 Surf1P09925 306 aa17.32■□□□□ 0.36
Nkx3-1-201ENSMUST00000022646 Zfp397Q7TNK4 527 aa17.32■□□□□ 0.36
Nkx3-1-201ENSMUST00000022646 Ankrd23Q812A3 306 aa17.32■□□□□ 0.36
Nkx3-1-201ENSMUST00000022646 Wasf1Q8R5H6 559 aa17.32■□□□□ 0.36
Nkx3-1-201ENSMUST00000022646 Kndc1Q0KK55 1742 aa17.32■□□□□ 0.36
Nkx3-1-201ENSMUST00000022646 FAM186AQ9D9R9 1790 aa17.32■□□□□ 0.36
Nkx3-1-201ENSMUST00000022646 Dennd3A2RT67 1274 aa17.32■□□□□ 0.36
Nkx3-1-201ENSMUST00000022646 Grin1P35438 938 aa17.32■□□□□ 0.36
Nkx3-1-201ENSMUST00000022646 Gnat2P50149 354 aa17.32■□□□□ 0.36
Nkx3-1-201ENSMUST00000022646 NgdnQ9DB96 315 aaKnown RBP17.32■□□□□ 0.36
Nkx3-1-201ENSMUST00000022646 Atp8b5A3FIN4 1183 aa17.31■□□□□ 0.36
Nkx3-1-201ENSMUST00000022646 Panx2Q6IMP4 677 aa17.31■□□□□ 0.36
Nkx3-1-201ENSMUST00000022646 Slc39a11Q8BWY7 342 aa17.31■□□□□ 0.36
Nkx3-1-201ENSMUST00000022646 Dnm3Q8BZ98 863 aa17.31■□□□□ 0.36
Nkx3-1-201ENSMUST00000022646 Ccdc150Q8CDI7 1110 aa17.31■□□□□ 0.36
Nkx3-1-201ENSMUST00000022646 Magi2Q9WVQ1 1275 aa17.31■□□□□ 0.36
Nkx3-1-201ENSMUST00000022646 Dync1i1O88485 628 aa17.31■□□□□ 0.36
Nkx3-1-201ENSMUST00000022646 Cyp24a1Q64441 514 aa17.31■□□□□ 0.36
Nkx3-1-201ENSMUST00000022646 Ttc12Q8BW49 704 aa17.31■□□□□ 0.36
Nkx3-1-201ENSMUST00000022646 Etnk1Q9D4V0 363 aa17.31■□□□□ 0.36
Nkx3-1-201ENSMUST00000022646 Dctpp1Q9QY93 170 aa17.31■□□□□ 0.36
Nkx3-1-201ENSMUST00000022646 Mapk8ip1Q9WVI9 707 aa17.31■□□□□ 0.36
Nkx3-1-201ENSMUST00000022646 Trip6Q9Z1Y4 480 aa17.31■□□□□ 0.36
Retrieved 100 of 22,080 RNA–protein pairs in 17 ms