RNA–Protein interactions for RNA: ENSMUST00000002043.9

Ccdc47-201, Transcript of Coiled-coil domain-containing protein 47, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc47, Length 5,193 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc47-201ENSMUST00000002043 Drc3Q9D5E4 523 aa10.22□□□□□ -0.77
Ccdc47-201ENSMUST00000002043 Itgb1bp2Q9R000 350 aa10.22□□□□□ -0.77
Ccdc47-201ENSMUST00000002043 Cc2d2aQ8CFW7 1633 aa10.22□□□□□ -0.77
Ccdc47-201ENSMUST00000002043 Naip7Q9JIB3 1402 aa10.22□□□□□ -0.77
Ccdc47-201ENSMUST00000002043 Terf1P70371 421 aa10.21□□□□□ -0.77
Ccdc47-201ENSMUST00000002043 Ccdc174Q3U155 467 aa10.21□□□□□ -0.77
Ccdc47-201ENSMUST00000002043 Dzip1Q8BMD2 852 aa10.21□□□□□ -0.77
Ccdc47-201ENSMUST00000002043 Serpinb12Q9D7P9 423 aa10.21□□□□□ -0.77
Ccdc47-201ENSMUST00000002043 Ncapd2Q8K2Z4 1392 aa10.21□□□□□ -0.77
Ccdc47-201ENSMUST00000002043 Sh3tc1G3X9F6 1346 aa10.21□□□□□ -0.77
Ccdc47-201ENSMUST00000002043 Mroh7A2AVR2 1279 aa10.21□□□□□ -0.77
Ccdc47-201ENSMUST00000002043 Gm4758L7N258 96 aa10.21□□□□□ -0.77
Ccdc47-201ENSMUST00000002043 Pdrg1P59048 133 aa10.21□□□□□ -0.77
Ccdc47-201ENSMUST00000002043 Naip6Q9JIB6 1403 aa10.21□□□□□ -0.77
Ccdc47-201ENSMUST00000002043 Abcb4P21440 1276 aa10.21□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 Xpo5Q924C1 1204 aaKnown RBP10.21□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 Lekr1B2RVN1 116 aa10.21□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 Capn2O08529 700 aa10.21□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 Pak1O88643 545 aa10.21□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 Cracr2aQ3UP38 310 aa10.21□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 Atp2b4Q6Q477 1205 aa10.21□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 Prune1Q8BIW1 454 aa10.21□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 Rps6kb1Q8BSK8 525 aa10.21□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 Gimap5Q8BWF2 308 aa10.21□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 Terf2ipQ91VL8 393 aa10.21□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 Apol11aE9PZG0 334 aa10.2□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 Snd1Q78PY7 910 aaKnown RBP10.2□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 Gbp5Q8CFB4 590 aa10.2□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 Plcd1Q8R3B1 756 aa10.2□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 Asic2Q925H0 512 aa10.2□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 Cd2bp2Q9CWK3 342 aaKnown RBP10.2□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 Appbp2Q9DAX9 585 aa10.2□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 Pdzd4Q9QY39 772 aa10.2□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 Sbno1Q689Z5 1390 aa10.2□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 Vps41Q5KU39 853 aa10.2□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 Fam83gQ5SWY7 812 aa10.2□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 Prpf40bQ80W14 870 aa10.2□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 Ubac1Q8VDI7 409 aa10.2□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 Mis12Q9CY25 206 aa10.2□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 Krt20Q9D312 431 aa10.2□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 Col4a3bpQ9EQG9 624 aa10.2□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 Atp12aQ9Z1W8 1035 aa10.2□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 Plb1Q3TTY0 1478 aa10.2□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 Zscan18E9PUD6 809 aa10.2□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 Mx1P09922 631 aa10.2□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 Zranb1Q7M760 708 aa10.2□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 Naa25Q8BWZ3 972 aa10.2□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 Pcdhb5Q91XZ5 792 aa10.2□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 Krt90E9Q1Z0 538 aa10.2□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 Prl3d2F6R3P9 224 aa10.2□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 Rtel1Q0VGM9 1203 aa10.2□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 Fchsd1Q6PFY1 688 aa10.2□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 Ttc27Q8CD92 847 aa10.2□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 Acot11Q8VHQ9 594 aa10.2□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 Cd274Q9EP73 290 aa10.2□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 Edc4Q3UJB9 1406 aaKnown RBP10.2□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 Myef2Q8C854 591 aaKnown RBP10.2□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 Prpf31Q8CCF0 499 aaKnown RBP10.2□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 Tnpo2Q99LG2 887 aaKnown RBP10.2□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 Serpini1O35684 410 aa10.19□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 Esyt2Q3TZZ7 845 aa10.19□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 Rsad2Q8CBB9 362 aa10.19□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 Zbtb3Q91X45 518 aa10.19□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 SarnpQ9D1J3 210 aaKnown RBP10.19□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 IkbkgO88522 412 aa10.19□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 Tom1O88746 492 aa10.19□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 Rps6ka1P18653 724 aa10.19□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 Slc8a1P70414 970 aa10.19□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 Zrsr1Q64707 428 aa10.19□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 Tpcn2Q8BWC0 731 aa10.19□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 SnrkQ8VDU5 748 aa10.19□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 Bloc1s4Q8VED2 215 aa10.19□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 Synpo2Q91YE8 1087 aaKnown RBP10.19□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 Aox4Q3TYQ9 1336 aa10.19□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 Ubn2Q80WC1 1314 aa10.19□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 Col20a1Q923P0 1320 aa10.19□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 Ssh2Q5SW75 1423 aa10.19□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 Lamc3Q9R0B6 1581 aa10.19□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 Eya2O08575 532 aa10.19□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 Mmp8O70138 465 aa10.19□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 Abtb2Q7TQI7 1024 aa10.19□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 RestQ8VIG1 1082 aa10.19□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 Ssfa2Q922B9 1252 aa10.19□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 Bicc1Q99MQ1 977 aaKnown RBP10.19□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 Trim42Q9D2H5 723 aa10.19□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 NapaQ9DB05 295 aa10.19□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 Stmn1P54227 149 aaKnown RBP10.19□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 Arl1P61211 181 aa10.19□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 Rapgef1Q3UHC1 1224 aa10.19□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 Gbp9Q8BTS3 619 aa10.19□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 Traf3ip3Q8C0G2 513 aa10.19□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 Psma7Q9Z2U0 248 aa10.19□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 MthfslL7N466 203 aa10.18□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 Mdm2P23804 489 aa10.18□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 Atp8a2P98200 1148 aa10.18□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 Rexo1Q7TT28 1213 aa10.18□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 Larp6Q8BN59 492 aa10.18□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 Bst2Q8R2Q8 172 aa10.18□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 Klhl40Q9D783 621 aa10.18□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 Ddx24Q9ESV0 857 aaKnown RBP10.18□□□□□ -0.78
Retrieved 100 of 22,080 RNA–protein pairs in 29.1 ms