RNA–Protein interactions for RNA: ENST00000641023.1

PHGDH-208, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,096 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-208ENST00000641023 CD99P14209 185 aa13.51□□□□□ -0.25
PHGDH-208ENST00000641023 RANP62826 216 aaKnown RBP13.51□□□□□ -0.25
PHGDH-208ENST00000641023 BLNKQ8WV28 456 aa13.51□□□□□ -0.25
PHGDH-208ENST00000641023 SHANK2-AS3Q9BTD1 123 aa13.51□□□□□ -0.25
PHGDH-208ENST00000641023 LY96Q9Y6Y9 160 aa13.51□□□□□ -0.25
PHGDH-208ENST00000641023 PGPEP1LA6NFU8 196 aa13.5□□□□□ -0.25
PHGDH-208ENST00000641023 IGF1P05019 195 aa13.5□□□□□ -0.25
PHGDH-208ENST00000641023 ZNF600Q6ZNG1 722 aa13.5□□□□□ -0.25
PHGDH-208ENST00000641023 BPIFA4PQ86YQ2 179 aa13.5□□□□□ -0.25
PHGDH-208ENST00000641023 OCC1Q8TAD7 63 aa13.5□□□□□ -0.25
PHGDH-208ENST00000641023 ZNF502Q8TBZ5 544 aa13.5□□□□□ -0.25
PHGDH-208ENST00000641023 C2CD4CQ8TF44 421 aa13.5□□□□□ -0.25
PHGDH-208ENST00000641023 OR5B12Q96R08 314 aa13.5□□□□□ -0.25
PHGDH-208ENST00000641023 LOC105371267A0A1B0GV96 52 aa13.49□□□□□ -0.25
PHGDH-208ENST00000641023 IGHG2P01859 326 aa13.49□□□□□ -0.25
PHGDH-208ENST00000641023 SNRPCP09234 159 aaKnown RBP13.49□□□□□ -0.25
PHGDH-208ENST00000641023 GNG4P50150 75 aa13.49□□□□□ -0.25
PHGDH-208ENST00000641023 ZNF329Q86UD4 541 aa13.49□□□□□ -0.25
PHGDH-208ENST00000641023 AURKAIP1Q9NWT8 199 aaPredicted RBP13.49□□□□□ -0.25
PHGDH-208ENST00000641023 RNF24Q9Y225 148 aa13.49□□□□□ -0.25
PHGDH-208ENST00000641023 DOPEY2Q9Y3R5 2298 aa13.49□□□□□ -0.25
PHGDH-208ENST00000641023 H3BRN7 92 aa13.49□□□□□ -0.25
PHGDH-208ENST00000641023 PPP1R2P9O14990 202 aa13.49□□□□□ -0.25
PHGDH-208ENST00000641023 FLI1Q01543 452 aaPredicted RBP13.49□□□□□ -0.25
PHGDH-208ENST00000641023 MS4A10Q96PG2 267 aa13.49□□□□□ -0.25
PHGDH-208ENST00000641023 TENM4Q6N022 2769 aa13.48□□□□□ -0.25
PHGDH-208ENST00000641023 C1orf196B1AJZ1 125 aa13.48□□□□□ -0.25
PHGDH-208ENST00000641023 CLEC3BP05452 202 aa13.48□□□□□ -0.25
PHGDH-208ENST00000641023 HIST1H1EP10412 219 aaKnown RBP13.48□□□□□ -0.25
PHGDH-208ENST00000641023 S100PP25815 95 aa13.48□□□□□ -0.25
PHGDH-208ENST00000641023 USF2Q15853 346 aaPredicted RBP13.48□□□□□ -0.25
PHGDH-208ENST00000641023 DEFB112Q30KQ8 113 aa13.48□□□□□ -0.25
PHGDH-208ENST00000641023 C19orf54Q5BKX5 351 aa13.48□□□□□ -0.25
PHGDH-208ENST00000641023 EEF1AKMT3Q96AZ1 226 aa13.48□□□□□ -0.25
PHGDH-208ENST00000641023 TRBV7-1A0A0A6YYK4 115 aa13.48□□□□□ -0.25
PHGDH-208ENST00000641023 MDFIC2A0A1B0GVS7 189 aa13.48□□□□□ -0.25
PHGDH-208ENST00000641023 S100A7P31151 101 aa13.48□□□□□ -0.25
PHGDH-208ENST00000641023 GPR183P32249 361 aa13.48□□□□□ -0.25
PHGDH-208ENST00000641023 MYCNOSP40205 109 aa13.48□□□□□ -0.25
PHGDH-208ENST00000641023 RAB5BP61020 215 aa13.48□□□□□ -0.25
PHGDH-208ENST00000641023 SFRP2Q96HF1 295 aa13.48□□□□□ -0.25
PHGDH-208ENST00000641023 CHRDL1Q9BU40 450 aa13.48□□□□□ -0.25
PHGDH-208ENST00000641023 LINC00527Q9UJ94 153 aa13.48□□□□□ -0.25
PHGDH-208ENST00000641023 TGIF2-C20orf24A0A0A6YYL0 155 aa13.47□□□□□ -0.25
PHGDH-208ENST00000641023 PGPA6NDG6 321 aa13.47□□□□□ -0.25
PHGDH-208ENST00000641023 CXCL1P09341 107 aa13.47□□□□□ -0.25
PHGDH-208ENST00000641023 ADMP35318 185 aa13.47□□□□□ -0.25
PHGDH-208ENST00000641023 GALR1P47211 349 aa13.47□□□□□ -0.25
PHGDH-208ENST00000641023 CNN1P51911 297 aaKnown RBP13.47□□□□□ -0.25
PHGDH-208ENST00000641023 CENPWQ5EE01 88 aa13.47□□□□□ -0.25
PHGDH-208ENST00000641023 CYB5R2Q6BCY4 276 aa13.47□□□□□ -0.25
PHGDH-208ENST00000641023 BCL6BQ8N143 479 aaPredicted RBP13.47□□□□□ -0.25
PHGDH-208ENST00000641023 OR4F17Q8NGA8 305 aa13.47□□□□□ -0.25
PHGDH-208ENST00000641023 CSPG4Q6UVK1 2322 aa13.47□□□□□ -0.25
PHGDH-208ENST00000641023 ZNF98A6NK75 572 aa13.46□□□□□ -0.25
PHGDH-208ENST00000641023 FAM223BA6NKX1 122 aa13.46□□□□□ -0.25
PHGDH-208ENST00000641023 RPS10P46783 165 aaKnown RBP13.46□□□□□ -0.25
PHGDH-208ENST00000641023 TAS2R60P59551 318 aa13.46□□□□□ -0.25
PHGDH-208ENST00000641023 BLCAPP62952 87 aa13.46□□□□□ -0.25
PHGDH-208ENST00000641023 ATP5G2Q06055 141 aa13.46□□□□□ -0.25
PHGDH-208ENST00000641023 KRTAP1-3Q8IUG1 177 aa13.46□□□□□ -0.25
PHGDH-208ENST00000641023 FAM223AQ8IWN6 122 aa13.46□□□□□ -0.25
PHGDH-208ENST00000641023 CDC42EP3Q9UKI2 254 aa13.46□□□□□ -0.25
PHGDH-208ENST00000641023 APCP25054 2843 aa13.46□□□□□ -0.25
PHGDH-208ENST00000641023 TRBV24-1A0A075B6N3 115 aa13.46□□□□□ -0.26
PHGDH-208ENST00000641023 NBPF19A0A087WUL8 3843 aa13.46□□□□□ -0.26
PHGDH-208ENST00000641023 PEX7O00628 323 aa13.46□□□□□ -0.26
PHGDH-208ENST00000641023 SLC25A5P05141 298 aaKnown RBP13.46□□□□□ -0.26
PHGDH-208ENST00000641023 HNF1AP20823 631 aa13.46□□□□□ -0.26
PHGDH-208ENST00000641023 ATP6V0BQ99437 205 aa13.46□□□□□ -0.26
PHGDH-208ENST00000641023 EPDR1Q9UM22 224 aa13.46□□□□□ -0.26
PHGDH-208ENST00000641023 AP4M1O00189 453 aa13.45□□□□□ -0.26
PHGDH-208ENST00000641023 PFN1P07737 140 aaKnown RBP13.45□□□□□ -0.26
PHGDH-208ENST00000641023 IER3P46695 156 aa13.45□□□□□ -0.26
PHGDH-208ENST00000641023 HIST2H2BCQ6DN03 193 aa13.45□□□□□ -0.26
PHGDH-208ENST00000641023 TEX38Q6PEX7 206 aa13.45□□□□□ -0.26
PHGDH-208ENST00000641023 OR5R1Q8NH85 324 aa13.45□□□□□ -0.26
PHGDH-208ENST00000641023 FAM210BQ96KR6 192 aa13.45□□□□□ -0.26
PHGDH-208ENST00000641023 Q9H3A6 140 aa13.45□□□□□ -0.26
PHGDH-208ENST00000641023 ZNF586Q9NXT0 402 aa13.45□□□□□ -0.26
PHGDH-208ENST00000641023 H3BUA1 57 aa13.44□□□□□ -0.26
PHGDH-208ENST00000641023 BMPR1BO00238 502 aa13.44□□□□□ -0.26
PHGDH-208ENST00000641023 FSHBP01225 129 aa13.44□□□□□ -0.26
PHGDH-208ENST00000641023 IGHV4-59P01825 116 aa13.44□□□□□ -0.26
PHGDH-208ENST00000641023 KCNIP4Q6PIL6 250 aa13.44□□□□□ -0.26
PHGDH-208ENST00000641023 CLEC19AQ6UXS0 136 aa13.44□□□□□ -0.26
PHGDH-208ENST00000641023 C9orf139Q6ZV77 190 aa13.44□□□□□ -0.26
PHGDH-208ENST00000641023 C1QL4Q86Z23 238 aa13.44□□□□□ -0.26
PHGDH-208ENST00000641023 C5orf17Q8NAS9 161 aa13.44□□□□□ -0.26
PHGDH-208ENST00000641023 CCDC140Q96MF4 163 aa13.44□□□□□ -0.26
PHGDH-208ENST00000641023 RABAC1Q9UI14 185 aa13.44□□□□□ -0.26
PHGDH-208ENST00000641023 K7EN84 100 aa13.44□□□□□ -0.26
PHGDH-208ENST00000641023 BRI3O95415 125 aa13.44□□□□□ -0.26
PHGDH-208ENST00000641023 TRGV3P03979 118 aa13.44□□□□□ -0.26
PHGDH-208ENST00000641023 PPIFP30405 207 aaKnown RBP13.44□□□□□ -0.26
PHGDH-208ENST00000641023 SRP14P37108 136 aaKnown RBP13.44□□□□□ -0.26
PHGDH-208ENST00000641023 OR10G8Q8NGN5 311 aa13.44□□□□□ -0.26
PHGDH-208ENST00000641023 TMEM190Q8WZ59 177 aa13.44□□□□□ -0.26
PHGDH-208ENST00000641023 GNB4Q9HAV0 340 aa13.44□□□□□ -0.26
PHGDH-208ENST00000641023 CR1P17927 2039 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms