RNA–Protein interactions for RNA: ENST00000640728.1

SPIN3-244, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 1,954 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-244ENST00000640728 TRBV7-1A0A0A6YYK4 115 aa16.58■□□□□ 0.25
SPIN3-244ENST00000640728 FAM223BA6NKX1 122 aa16.58■□□□□ 0.25
SPIN3-244ENST00000640728 H3BUA1 57 aa16.58■□□□□ 0.25
SPIN3-244ENST00000640728 NDUFB4O95168 129 aa16.58■□□□□ 0.25
SPIN3-244ENST00000640728 PNRC1Q12796 327 aaPredicted RBP16.58■□□□□ 0.25
SPIN3-244ENST00000640728 LEMD1Q68G75 181 aa16.58■□□□□ 0.25
SPIN3-244ENST00000640728 FAM223AQ8IWN6 122 aa16.58■□□□□ 0.25
SPIN3-244ENST00000640728 TEX29Q8N6K0 151 aa16.58■□□□□ 0.25
SPIN3-244ENST00000640728 SHANK2-AS3Q9BTD1 123 aa16.58■□□□□ 0.25
SPIN3-244ENST00000640728 GAR1Q9NY12 217 aaKnown RBP16.58■□□□□ 0.25
SPIN3-244ENST00000640728 TEX15Q9BXT5 2789 aa16.58■□□□□ 0.24
SPIN3-244ENST00000640728 GPR183P32249 361 aa16.58■□□□□ 0.24
SPIN3-244ENST00000640728 TMEM241Q24JQ0 296 aa16.58■□□□□ 0.24
SPIN3-244ENST00000640728 ZNF343Q6P1L6 599 aa16.58■□□□□ 0.24
SPIN3-244ENST00000640728 NAT8Q9UHE5 227 aa16.58■□□□□ 0.24
SPIN3-244ENST00000640728 FASNP49327 2511 aaKnown RBP16.57■□□□□ 0.24
SPIN3-244ENST00000640728 SCO2A0A1W2PP80 73 aa16.57■□□□□ 0.24
SPIN3-244ENST00000640728 TRGV3P03979 118 aa16.57■□□□□ 0.24
SPIN3-244ENST00000640728 GP9P14770 177 aa16.57■□□□□ 0.24
SPIN3-244ENST00000640728 KRTAP1-1Q07627 177 aa16.57■□□□□ 0.24
SPIN3-244ENST00000640728 USF2Q15853 346 aaPredicted RBP16.57■□□□□ 0.24
SPIN3-244ENST00000640728 C11orf52Q96A22 123 aa16.57■□□□□ 0.24
SPIN3-244ENST00000640728 ZNF414Q96IQ9 312 aa16.57■□□□□ 0.24
SPIN3-244ENST00000640728 GGTLC3B5MD39 225 aa16.57■□□□□ 0.24
SPIN3-244ENST00000640728 H3BRN7 92 aa16.57■□□□□ 0.24
SPIN3-244ENST00000640728 HOXA3O43365 443 aaPredicted RBP16.57■□□□□ 0.24
SPIN3-244ENST00000640728 ATP6V0BQ99437 205 aa16.57■□□□□ 0.24
SPIN3-244ENST00000640728 TMEM14CQ9P0S9 112 aa16.57■□□□□ 0.24
SPIN3-244ENST00000640728 CFHR3Q02985 330 aa16.56■□□□□ 0.24
SPIN3-244ENST00000640728 CLEC19AQ6UXS0 136 aa16.56■□□□□ 0.24
SPIN3-244ENST00000640728 DERL1Q9BUN8 251 aa16.56■□□□□ 0.24
SPIN3-244ENST00000640728 SMCO4Q9NRQ5 59 aa16.56■□□□□ 0.24
SPIN3-244ENST00000640728 ZNF469Q96JG9 3925 aaPredicted RBP16.56■□□□□ 0.24
SPIN3-244ENST00000640728 SUMO1P63165 101 aaKnown RBP16.55■□□□□ 0.24
SPIN3-244ENST00000640728 B4DEV8 164 aa16.55■□□□□ 0.24
SPIN3-244ENST00000640728 IGLV1-40P01703 118 aa16.55■□□□□ 0.24
SPIN3-244ENST00000640728 NBEAP1P0C6P0 100 aa16.55■□□□□ 0.24
SPIN3-244ENST00000640728 ZNF600Q6ZNG1 722 aa16.55■□□□□ 0.24
SPIN3-244ENST00000640728 IL17RELQ6ZVW7 336 aa16.55■□□□□ 0.24
SPIN3-244ENST00000640728 CD5LO43866 347 aa16.54■□□□□ 0.24
SPIN3-244ENST00000640728 TPPP2P59282 170 aa16.54■□□□□ 0.24
SPIN3-244ENST00000640728 S100A7AQ86SG5 101 aa16.54■□□□□ 0.24
SPIN3-244ENST00000640728 HECTD1Q9ULT8 2610 aa16.54■□□□□ 0.24
SPIN3-244ENST00000640728 A0A087WWC5 75 aa16.53■□□□□ 0.24
SPIN3-244ENST00000640728 TGOLN2O43493 480 aa16.53■□□□□ 0.24
SPIN3-244ENST00000640728 SNRPCP09234 159 aaKnown RBP16.53■□□□□ 0.24
SPIN3-244ENST00000640728 USMG5Q96IX5 58 aa16.53■□□□□ 0.24
SPIN3-244ENST00000640728 ZNF98A6NK75 572 aa16.53■□□□□ 0.24
SPIN3-244ENST00000640728 CRYBB3P26998 211 aa16.53■□□□□ 0.24
SPIN3-244ENST00000640728 RPL23P62829 140 aaKnown RBP16.53■□□□□ 0.24
SPIN3-244ENST00000640728 SIGLECL1Q8N7X8 197 aa16.53■□□□□ 0.24
SPIN3-244ENST00000640728 ELOVL1Q9BW60 279 aa16.53■□□□□ 0.24
SPIN3-244ENST00000640728 KLK15Q9H2R5 256 aa16.53■□□□□ 0.24
SPIN3-244ENST00000640728 TUBA4BQ9H853 241 aa16.53■□□□□ 0.24
SPIN3-244ENST00000640728 MYCNOSP40205 109 aa16.52■□□□□ 0.24
SPIN3-244ENST00000640728 TMEM95Q3KNT9 176 aa16.52■□□□□ 0.24
SPIN3-244ENST00000640728 TOMM20LQ6UXN7 152 aa16.52■□□□□ 0.24
SPIN3-244ENST00000640728 BLNKQ8WV28 456 aa16.52■□□□□ 0.24
SPIN3-244ENST00000640728 FLNAP21333 2647 aaKnown RBP16.52■□□□□ 0.23
SPIN3-244ENST00000640728 IGHV3-35A0A0C4DH35 117 aa16.51■□□□□ 0.23
SPIN3-244ENST00000640728 HIST1H1EP10412 219 aaKnown RBP16.51■□□□□ 0.23
SPIN3-244ENST00000640728 ZNF329Q86UD4 541 aa16.51■□□□□ 0.23
SPIN3-244ENST00000640728 PF4V1P10720 104 aa16.51■□□□□ 0.23
SPIN3-244ENST00000640728 RANP62826 216 aaKnown RBP16.51■□□□□ 0.23
SPIN3-244ENST00000640728 ADIRFQ15847 76 aa16.51■□□□□ 0.23
SPIN3-244ENST00000640728 BPIFA4PQ86YQ2 179 aa16.51■□□□□ 0.23
SPIN3-244ENST00000640728 PRSS22Q9GZN4 317 aa16.51■□□□□ 0.23
SPIN3-244ENST00000640728 ZFAND3Q9H8U3 227 aa16.51■□□□□ 0.23
SPIN3-244ENST00000640728 GNB4Q9HAV0 340 aa16.51■□□□□ 0.23
SPIN3-244ENST00000640728 TRBV20OR9-2A0A075B6H5 130 aa16.5■□□□□ 0.23
SPIN3-244ENST00000640728 MRPS12O15235 138 aaKnown RBP16.5■□□□□ 0.23
SPIN3-244ENST00000640728 C2CD4CQ8TF44 421 aa16.5■□□□□ 0.23
SPIN3-244ENST00000640728 NPFFR1Q9GZQ6 430 aa16.5■□□□□ 0.23
SPIN3-244ENST00000640728 ZNF586Q9NXT0 402 aa16.5■□□□□ 0.23
SPIN3-244ENST00000640728 TLN2Q9Y4G6 2542 aa16.5■□□□□ 0.23
SPIN3-244ENST00000640728 BMPR1BO00238 502 aa16.49■□□□□ 0.23
SPIN3-244ENST00000640728 TSPAN4O14817 238 aa16.49■□□□□ 0.23
SPIN3-244ENST00000640728 SRP14P37108 136 aaKnown RBP16.49■□□□□ 0.23
SPIN3-244ENST00000640728 RAB9AP51151 201 aa16.49■□□□□ 0.23
SPIN3-244ENST00000640728 ZNF702PQ9H963 129 aa16.49■□□□□ 0.23
SPIN3-244ENST00000640728 RABAC1Q9UI14 185 aa16.49■□□□□ 0.23
SPIN3-244ENST00000640728 TMA7Q9Y2S6 64 aaKnown RBP16.49■□□□□ 0.23
SPIN3-244ENST00000640728 IGHG4P01861 327 aa16.49■□□□□ 0.23
SPIN3-244ENST00000640728 RPL35P42766 123 aaKnown RBP16.49■□□□□ 0.23
SPIN3-244ENST00000640728 LINC01551Q86U37 167 aa16.49■□□□□ 0.23
SPIN3-244ENST00000640728 YAE1D1Q9NRH1 226 aa16.49■□□□□ 0.23
SPIN3-244ENST00000640728 IGLC2P0DOY2 106 aa16.48■□□□□ 0.23
SPIN3-244ENST00000640728 RELQ04864 619 aaPredicted RBP16.48■□□□□ 0.23
SPIN3-244ENST00000640728 TMEM86BQ8N661 226 aa16.48■□□□□ 0.23
SPIN3-244ENST00000640728 RNF24Q9Y225 148 aa16.48■□□□□ 0.23
SPIN3-244ENST00000640728 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP16.47■□□□□ 0.23
SPIN3-244ENST00000640728 HELTA6NFD8 242 aa16.47■□□□□ 0.23
SPIN3-244ENST00000640728 COLCA2A8K830 154 aa16.47■□□□□ 0.23
SPIN3-244ENST00000640728 PPP5D1E7EU14 171 aa16.47■□□□□ 0.23
SPIN3-244ENST00000640728 H3BTX0 84 aa16.47■□□□□ 0.23
SPIN3-244ENST00000640728 ISOC2Q96AB3 205 aa16.47■□□□□ 0.23
SPIN3-244ENST00000640728 TCEAL7Q9BRU2 100 aa16.47■□□□□ 0.23
SPIN3-244ENST00000640728 TMEM242Q9NWH2 141 aa16.47■□□□□ 0.23
SPIN3-244ENST00000640728 MXRA5Q9NR99 2828 aa16.47■□□□□ 0.23
SPIN3-244ENST00000640728 IGHV3OR16-8A0A075B7F1 116 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms