RNA–Protein interactions for RNA: ENST00000640640.1

SCARB2-223, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5 BASIC

Gene SCARB2, Length 4,608 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-223ENST00000640640 NPFFR1Q9GZQ6 430 aa14.3□□□□□ -0.12
SCARB2-223ENST00000640640 ZNF106Q9H2Y7 1883 aaKnown RBP14.3□□□□□ -0.12
SCARB2-223ENST00000640640 C7orf71A4D174 169 aa14.3□□□□□ -0.12
SCARB2-223ENST00000640640 TMEM155Q4W5P6 130 aa14.3□□□□□ -0.12
SCARB2-223ENST00000640640 PET117Q6UWS5 81 aa14.3□□□□□ -0.12
SCARB2-223ENST00000640640 TMEM219Q86XT9 240 aa14.3□□□□□ -0.12
SCARB2-223ENST00000640640 TSKUQ8WUA8 353 aa14.3□□□□□ -0.12
SCARB2-223ENST00000640640 GNB1LQ9BYB4 327 aa14.3□□□□□ -0.12
SCARB2-223ENST00000640640 NCOR1P1Q9H4R4 102 aa14.3□□□□□ -0.12
SCARB2-223ENST00000640640 CSPG4Q6UVK1 2322 aa14.3□□□□□ -0.12
SCARB2-223ENST00000640640 RRN3P1Q2M238 152 aa14.3□□□□□ -0.12
SCARB2-223ENST00000640640 LYPD6Q86Y78 171 aa14.29□□□□□ -0.12
SCARB2-223ENST00000640640 EXOC3-AS1Q8N2X6 119 aa14.29□□□□□ -0.12
SCARB2-223ENST00000640640 PRTN3P24158 256 aa14.29□□□□□ -0.12
SCARB2-223ENST00000640640 NUDT10Q8NFP7 164 aa14.29□□□□□ -0.12
SCARB2-223ENST00000640640 NUDT11Q96G61 164 aa14.29□□□□□ -0.12
SCARB2-223ENST00000640640 FNDC10F2Z333 226 aa14.29□□□□□ -0.12
SCARB2-223ENST00000640640 PRB4P10163 310 aaPredicted RBP14.29□□□□□ -0.12
SCARB2-223ENST00000640640 SSC4DQ8WTU2 575 aa14.29□□□□□ -0.12
SCARB2-223ENST00000640640 HIST1H2BLQ99880 126 aa14.29□□□□□ -0.12
SCARB2-223ENST00000640640 COL4A4P53420 1690 aaPredicted RBP14.28□□□□□ -0.12
SCARB2-223ENST00000640640 TRAV41A0A0B4J266 112 aa14.28□□□□□ -0.12
SCARB2-223ENST00000640640 IL15RAQ13261 267 aa14.28□□□□□ -0.12
SCARB2-223ENST00000640640 PRDM13Q9H4Q3 707 aa14.28□□□□□ -0.12
SCARB2-223ENST00000640640 TMEM14BQ9NUH8 114 aa14.28□□□□□ -0.12
SCARB2-223ENST00000640640 MOB4Q9Y3A3 225 aa14.28□□□□□ -0.12
SCARB2-223ENST00000640640 A0A1W2PPI3 338 aa14.28□□□□□ -0.12
SCARB2-223ENST00000640640 PAX8Q06710 450 aa14.28□□□□□ -0.12
SCARB2-223ENST00000640640 C14orf144Q96I85 54 aa14.28□□□□□ -0.12
SCARB2-223ENST00000640640 ZNF324O75467 553 aaPredicted RBP14.28□□□□□ -0.12
SCARB2-223ENST00000640640 GCSHP23434 173 aa14.28□□□□□ -0.12
SCARB2-223ENST00000640640 C17orf58Q2M2W7 97 aa14.28□□□□□ -0.12
SCARB2-223ENST00000640640 GFI1BQ5VTD9 330 aa14.28□□□□□ -0.12
SCARB2-223ENST00000640640 CTAG1AP78358 180 aa14.27□□□□□ -0.12
SCARB2-223ENST00000640640 BPESC1Q9GZL8 116 aa14.27□□□□□ -0.12
SCARB2-223ENST00000640640 C15orf65H3BRN8 121 aa14.27□□□□□ -0.12
SCARB2-223ENST00000640640 OR4X2Q8NGF9 303 aa14.27□□□□□ -0.12
SCARB2-223ENST00000640640 PRSS22Q9GZN4 317 aa14.27□□□□□ -0.12
SCARB2-223ENST00000640640 TCRAP04437 139 aa14.27□□□□□ -0.13
SCARB2-223ENST00000640640 SMAGPQ0VAQ4 97 aa14.27□□□□□ -0.13
SCARB2-223ENST00000640640 NBL1P41271 181 aa14.27□□□□□ -0.13
SCARB2-223ENST00000640640 BRD3OSQ6XYD6 125 aa14.27□□□□□ -0.13
SCARB2-223ENST00000640640 HIST3H2BBQ8N257 126 aa14.26□□□□□ -0.13
SCARB2-223ENST00000640640 TCF21O43680 179 aa14.26□□□□□ -0.13
SCARB2-223ENST00000640640 RPL15P61313 204 aaKnown RBP14.26□□□□□ -0.13
SCARB2-223ENST00000640640 NPIPB5A8MRT5 1133 aa14.26□□□□□ -0.13
SCARB2-223ENST00000640640 AMMECR1LQ6DCA0 310 aa14.26□□□□□ -0.13
SCARB2-223ENST00000640640 GLMPQ8WWB7 406 aa14.26□□□□□ -0.13
SCARB2-223ENST00000640640 CENPFP49454 3210 aa14.25□□□□□ -0.13
SCARB2-223ENST00000640640 PPP1R17O96001 155 aa14.25□□□□□ -0.13
SCARB2-223ENST00000640640 LOXP28300 417 aaPredicted RBP14.25□□□□□ -0.13
SCARB2-223ENST00000640640 ZNF134P52741 427 aa14.25□□□□□ -0.13
SCARB2-223ENST00000640640 SAMD13Q5VXD3 122 aa14.25□□□□□ -0.13
SCARB2-223ENST00000640640 LINC00587B1AMM8 73 aa14.25□□□□□ -0.13
SCARB2-223ENST00000640640 JOSD1Q15040 202 aaPredicted RBP14.25□□□□□ -0.13
SCARB2-223ENST00000640640 OR5AN1Q8NGI8 311 aa14.25□□□□□ -0.13
SCARB2-223ENST00000640640 PCNX3Q9H6A9 2034 aa14.25□□□□□ -0.13
SCARB2-223ENST00000640640 RNASE4P34096 147 aaKnown RBP14.24□□□□□ -0.13
SCARB2-223ENST00000640640 IGFL2Q6UWQ7 119 aa14.24□□□□□ -0.13
SCARB2-223ENST00000640640 Q6ZSR3 168 aa14.24□□□□□ -0.13
SCARB2-223ENST00000640640 FGF23Q9GZV9 251 aaPredicted RBP14.24□□□□□ -0.13
SCARB2-223ENST00000640640 LY96Q9Y6Y9 160 aa14.24□□□□□ -0.13
SCARB2-223ENST00000640640 TMEM238LA0A1B0GVL6 79 aa14.24□□□□□ -0.13
SCARB2-223ENST00000640640 A6NJY4 79 aa14.24□□□□□ -0.13
SCARB2-223ENST00000640640 H3BUX3 64 aa14.24□□□□□ -0.13
SCARB2-223ENST00000640640 NPFFO15130 113 aa14.24□□□□□ -0.13
SCARB2-223ENST00000640640 MMP23AO75900 390 aa14.24□□□□□ -0.13
SCARB2-223ENST00000640640 VDAC2P45880 294 aaPredicted RBP14.24□□□□□ -0.13
SCARB2-223ENST00000640640 PRSS33Q8NF86 280 aa14.24□□□□□ -0.13
SCARB2-223ENST00000640640 TMEM160Q9NX00 188 aa14.24□□□□□ -0.13
SCARB2-223ENST00000640640 PPIFP30405 207 aaKnown RBP14.24□□□□□ -0.13
SCARB2-223ENST00000640640 TEX36Q5VZQ5 186 aa14.24□□□□□ -0.13
SCARB2-223ENST00000640640 BEND2Q8NDZ0 799 aa14.24□□□□□ -0.13
SCARB2-223ENST00000640640 SPRY4Q9C004 299 aa14.24□□□□□ -0.13
SCARB2-223ENST00000640640 B4DSR2 109 aa14.23□□□□□ -0.13
SCARB2-223ENST00000640640 NUTF2P61970 127 aaKnown RBP14.23□□□□□ -0.13
SCARB2-223ENST00000640640 HIST1H4GQ99525 98 aa14.23□□□□□ -0.13
SCARB2-223ENST00000640640 A0A1W2PNU3 283 aaPredicted RBP14.23□□□□□ -0.13
SCARB2-223ENST00000640640 ATP5LO75964 103 aa14.23□□□□□ -0.13
SCARB2-223ENST00000640640 AMBPP02760 352 aa14.23□□□□□ -0.13
SCARB2-223ENST00000640640 ATP5L2Q7Z4Y8 100 aa14.23□□□□□ -0.13
SCARB2-223ENST00000640640 TRAV8-1A0A0A6YYK1 113 aa14.23□□□□□ -0.13
SCARB2-223ENST00000640640 OR11H12B2RN74 326 aa14.23□□□□□ -0.13
SCARB2-223ENST00000640640 LINC00614P0C842 121 aa14.23□□□□□ -0.13
SCARB2-223ENST00000640640 GZMBP10144 247 aa14.23□□□□□ -0.13
SCARB2-223ENST00000640640 OR11H1Q8NG94 326 aa14.23□□□□□ -0.13
SCARB2-223ENST00000640640 OR11H2Q8NH07 326 aa14.23□□□□□ -0.13
SCARB2-223ENST00000640640 RAB37Q96AX2 223 aa14.23□□□□□ -0.13
SCARB2-223ENST00000640640 DSCR9P59020 149 aa14.22□□□□□ -0.13
SCARB2-223ENST00000640640 ITLN2Q8WWU7 325 aaPredicted RBP14.22□□□□□ -0.13
SCARB2-223ENST00000640640 NDUFA4L2Q9NRX3 87 aa14.22□□□□□ -0.13
SCARB2-223ENST00000640640 GAGE10A6NGK3 116 aa14.22□□□□□ -0.13
SCARB2-223ENST00000640640 SAA4P35542 130 aa14.22□□□□□ -0.13
SCARB2-223ENST00000640640 FBLN7Q53RD9 439 aa14.22□□□□□ -0.13
SCARB2-223ENST00000640640 PAPPA-AS1Q5QFB9 102 aa14.22□□□□□ -0.13
SCARB2-223ENST00000640640 K7EM74 188 aa14.22□□□□□ -0.13
SCARB2-223ENST00000640640 PAX1P15863 534 aa14.22□□□□□ -0.13
SCARB2-223ENST00000640640 C11orf53Q8IXP5 236 aa14.22□□□□□ -0.13
SCARB2-223ENST00000640640 IGKV2-40A0A087WW87 121 aaPredicted RBP14.22□□□□□ -0.13
SCARB2-223ENST00000640640 IGKV2D-40P01614 121 aaPredicted RBP14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms