RNA–Protein interactions for RNA: ENST00000639856.1

TRIM3-215, Transcript of tripartite motif containing 3, humanhuman

TSL 5 BASIC

Gene TRIM3, Length 2,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-215ENST00000639856 GP9P14770 177 aa11.92□□□□□ -0.5
TRIM3-215ENST00000639856 CBLN1P23435 193 aa11.92□□□□□ -0.5
TRIM3-215ENST00000639856 SAA4P35542 130 aa11.92□□□□□ -0.5
TRIM3-215ENST00000639856 KRTAP10-9P60411 292 aa11.92□□□□□ -0.5
TRIM3-215ENST00000639856 C5orf64Q2M2E5 130 aa11.92□□□□□ -0.5
TRIM3-215ENST00000639856 DNLZQ5SXM8 178 aa11.92□□□□□ -0.5
TRIM3-215ENST00000639856 OR1L6Q8NGR2 347 aa11.92□□□□□ -0.5
TRIM3-215ENST00000639856 BLNKQ8WV28 456 aa11.92□□□□□ -0.5
TRIM3-215ENST00000639856 RASL11BQ9BPW5 248 aa11.92□□□□□ -0.5
TRIM3-215ENST00000639856 OOSP1A8MZH6 123 aa11.91□□□□□ -0.5
TRIM3-215ENST00000639856 HIST1H1BP16401 226 aaKnown RBP11.91□□□□□ -0.5
TRIM3-215ENST00000639856 ZNF600Q6ZNG1 722 aa11.91□□□□□ -0.5
TRIM3-215ENST00000639856 PIP4P2Q8N4L2 257 aa11.91□□□□□ -0.5
TRIM3-215ENST00000639856 EPDR1Q9UM22 224 aa11.91□□□□□ -0.5
TRIM3-215ENST00000639856 HIGD1AQ9Y241 93 aa11.91□□□□□ -0.5
TRIM3-215ENST00000639856 IGHV3OR16-10A0A075B7F0 116 aa11.9□□□□□ -0.5
TRIM3-215ENST00000639856 IGKV1-17P01599 117 aa11.9□□□□□ -0.5
TRIM3-215ENST00000639856 LYZP61626 148 aa11.9□□□□□ -0.5
TRIM3-215ENST00000639856 CX3CL1P78423 397 aa11.9□□□□□ -0.5
TRIM3-215ENST00000639856 RPL19P84098 196 aaKnown RBP11.9□□□□□ -0.5
TRIM3-215ENST00000639856 PAX8Q06710 450 aa11.9□□□□□ -0.5
TRIM3-215ENST00000639856 BAGE2Q86Y30 109 aa11.9□□□□□ -0.5
TRIM3-215ENST00000639856 NHLRC2Q8NBF2 726 aa11.9□□□□□ -0.5
TRIM3-215ENST00000639856 FAM103A1Q9BTL3 118 aaKnown RBP11.9□□□□□ -0.5
TRIM3-215ENST00000639856 DOPEY2Q9Y3R5 2298 aa11.9□□□□□ -0.5
TRIM3-215ENST00000639856 TRBV9A0A0B4J1U6 114 aa11.9□□□□□ -0.5
TRIM3-215ENST00000639856 TRAV34A0A0B4J273 112 aa11.9□□□□□ -0.5
TRIM3-215ENST00000639856 PGPA6NDG6 321 aa11.9□□□□□ -0.5
TRIM3-215ENST00000639856 SLC25A5P05141 298 aaKnown RBP11.9□□□□□ -0.5
TRIM3-215ENST00000639856 TMEM183BQ1AE95 376 aa11.9□□□□□ -0.5
TRIM3-215ENST00000639856 FAM120AOSQ5T036 256 aa11.9□□□□□ -0.5
TRIM3-215ENST00000639856 LEMD1Q68G75 181 aa11.9□□□□□ -0.5
TRIM3-215ENST00000639856 TMEM18Q96B42 140 aa11.9□□□□□ -0.5
TRIM3-215ENST00000639856 MRPL18Q9H0U6 180 aaKnown RBP11.9□□□□□ -0.5
TRIM3-215ENST00000639856 TBL2Q9Y4P3 447 aaKnown RBP11.9□□□□□ -0.5
TRIM3-215ENST00000639856 CENPVL3A0A0U1RRI6 287 aa11.89□□□□□ -0.51
TRIM3-215ENST00000639856 SMIM27A0A1W2PRY6 76 aa11.89□□□□□ -0.51
TRIM3-215ENST00000639856 IER3P46695 156 aa11.89□□□□□ -0.51
TRIM3-215ENST00000639856 GNG5P63218 68 aa11.89□□□□□ -0.51
TRIM3-215ENST00000639856 NAV2Q8IVL1 2488 aa11.89□□□□□ -0.51
TRIM3-215ENST00000639856 RD3LP0DJH9 198 aa11.89□□□□□ -0.51
TRIM3-215ENST00000639856 JOSD1Q15040 202 aaPredicted RBP11.89□□□□□ -0.51
TRIM3-215ENST00000639856 ZNF562Q6V9R5 426 aa11.89□□□□□ -0.51
TRIM3-215ENST00000639856 FAM231DQ6ZW35 169 aa11.89□□□□□ -0.51
TRIM3-215ENST00000639856 GBGT1Q8N5D6 347 aa11.89□□□□□ -0.51
TRIM3-215ENST00000639856 Q8N6K4 173 aa11.89□□□□□ -0.51
TRIM3-215ENST00000639856 RBM14Q96PK6 669 aaKnown RBP11.89□□□□□ -0.51
TRIM3-215ENST00000639856 GNB1LQ9BYB4 327 aa11.89□□□□□ -0.51
TRIM3-215ENST00000639856 SLC25A39Q9BZJ4 359 aaPredicted RBP11.89□□□□□ -0.51
TRIM3-215ENST00000639856 SERTAD4Q9NUC0 356 aa11.89□□□□□ -0.51
TRIM3-215ENST00000639856 KLF12Q9Y4X4 402 aa11.89□□□□□ -0.51
TRIM3-215ENST00000639856 ZNF705GA8MUZ8 300 aaPredicted RBP11.88□□□□□ -0.51
TRIM3-215ENST00000639856 SNURFLB1AK76 121 aa11.88□□□□□ -0.51
TRIM3-215ENST00000639856 NPFFO15130 113 aa11.88□□□□□ -0.51
TRIM3-215ENST00000639856 FRMD6-AS1P0C7T7 363 aa11.88□□□□□ -0.51
TRIM3-215ENST00000639856 PAX1P15863 534 aa11.88□□□□□ -0.51
TRIM3-215ENST00000639856 UBE2G1P62253 170 aa11.88□□□□□ -0.51
TRIM3-215ENST00000639856 EBI3Q14213 229 aa11.88□□□□□ -0.51
TRIM3-215ENST00000639856 C5orf17Q8NAS9 161 aa11.88□□□□□ -0.51
TRIM3-215ENST00000639856 PRDM13Q9H4Q3 707 aa11.88□□□□□ -0.51
TRIM3-215ENST00000639856 MRPL27Q9P0M9 148 aaKnown RBP11.88□□□□□ -0.51
TRIM3-215ENST00000639856 TMEM14CQ9P0S9 112 aa11.88□□□□□ -0.51
TRIM3-215ENST00000639856 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.88□□□□□ -0.51
TRIM3-215ENST00000639856 NCBP2LA6PVI3 153 aaKnown RBP11.87□□□□□ -0.51
TRIM3-215ENST00000639856 SMIM12Q96EX1 92 aa11.87□□□□□ -0.51
TRIM3-215ENST00000639856 ATG101Q9BSB4 218 aa11.87□□□□□ -0.51
TRIM3-215ENST00000639856 NPIPB5A8MRT5 1133 aa11.87□□□□□ -0.51
TRIM3-215ENST00000639856 TMEM11P17152 192 aa11.87□□□□□ -0.51
TRIM3-215ENST00000639856 TCL1AP56279 114 aa11.87□□□□□ -0.51
TRIM3-215ENST00000639856 COX19Q49B96 90 aa11.87□□□□□ -0.51
TRIM3-215ENST00000639856 ASPHD1Q5U4P2 390 aa11.87□□□□□ -0.51
TRIM3-215ENST00000639856 WDR73Q6P4I2 378 aa11.87□□□□□ -0.51
TRIM3-215ENST00000639856 TMEM256Q8N2U0 113 aa11.87□□□□□ -0.51
TRIM3-215ENST00000639856 OR5R1Q8NH85 324 aa11.87□□□□□ -0.51
TRIM3-215ENST00000639856 ARPC1AQ92747 370 aa11.87□□□□□ -0.51
TRIM3-215ENST00000639856 Q9H3A6 140 aa11.87□□□□□ -0.51
TRIM3-215ENST00000639856 TRAV40A0A0B4J280 105 aa11.86□□□□□ -0.51
TRIM3-215ENST00000639856 A0A1B0GUS0 222 aa11.86□□□□□ -0.51
TRIM3-215ENST00000639856 GRIFINA4D1Z8 144 aa11.86□□□□□ -0.51
TRIM3-215ENST00000639856 SPINK4O60575 86 aa11.86□□□□□ -0.51
TRIM3-215ENST00000639856 MT-ND6P03923 174 aa11.86□□□□□ -0.51
TRIM3-215ENST00000639856 GZMBP10144 247 aa11.86□□□□□ -0.51
TRIM3-215ENST00000639856 KLF17Q5JT82 389 aaPredicted RBP11.86□□□□□ -0.51
TRIM3-215ENST00000639856 BRD3OSQ6XYD6 125 aa11.86□□□□□ -0.51
TRIM3-215ENST00000639856 MBD6Q96DN6 1003 aa11.86□□□□□ -0.51
TRIM3-215ENST00000639856 FANCD2OSQ96PS1 177 aa11.86□□□□□ -0.51
TRIM3-215ENST00000639856 C7orf69Q9H7B7 122 aa11.86□□□□□ -0.51
TRIM3-215ENST00000639856 HELZ2Q9BYK8 2649 aaKnown RBP11.86□□□□□ -0.51
TRIM3-215ENST00000639856 ZANQ9Y493 2812 aa11.86□□□□□ -0.51
TRIM3-215ENST00000639856 IGLV11-55A0A075B6I3 123 aa11.86□□□□□ -0.51
TRIM3-215ENST00000639856 H3BTX0 84 aa11.86□□□□□ -0.51
TRIM3-215ENST00000639856 TOMM40O96008 361 aa11.86□□□□□ -0.51
TRIM3-215ENST00000639856 MSMBP08118 114 aa11.86□□□□□ -0.51
TRIM3-215ENST00000639856 HIST1H1EP10412 219 aaKnown RBP11.86□□□□□ -0.51
TRIM3-215ENST00000639856 CRISP2P16562 243 aa11.86□□□□□ -0.51
TRIM3-215ENST00000639856 SLC35B1P78383 322 aa11.86□□□□□ -0.51
TRIM3-215ENST00000639856 NDPQ00604 133 aa11.86□□□□□ -0.51
TRIM3-215ENST00000639856 NUDT10Q8NFP7 164 aa11.86□□□□□ -0.51
TRIM3-215ENST00000639856 NUDT11Q96G61 164 aa11.86□□□□□ -0.51
TRIM3-215ENST00000639856 TMEM68Q96MH6 324 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms