RNA–Protein interactions for RNA: ENST00000628646.2

SYNGAP1-207, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,264 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-207ENST00000628646 NPIPB3Q92617 1050 aa9.89□□□□□ -0.83
SYNGAP1-207ENST00000628646 SEC14L6B5MCN3 397 aa9.89□□□□□ -0.83
SYNGAP1-207ENST00000628646 CSN1S1P47710 185 aa9.89□□□□□ -0.83
SYNGAP1-207ENST00000628646 ZNF562Q6V9R5 426 aa9.89□□□□□ -0.83
SYNGAP1-207ENST00000628646 C12orf54Q6X4T0 127 aa9.89□□□□□ -0.83
SYNGAP1-207ENST00000628646 OR1B1Q8NGR6 318 aa9.89□□□□□ -0.83
SYNGAP1-207ENST00000628646 RITA1Q96K30 269 aa9.89□□□□□ -0.83
SYNGAP1-207ENST00000628646 OR4F17Q8NGA8 305 aa9.88□□□□□ -0.83
SYNGAP1-207ENST00000628646 BORCS7Q96B45 105 aa9.88□□□□□ -0.83
SYNGAP1-207ENST00000628646 STAG3L2P0CL84 134 aa9.88□□□□□ -0.83
SYNGAP1-207ENST00000628646 STAG3L3P0CL85 134 aa9.88□□□□□ -0.83
SYNGAP1-207ENST00000628646 RHOGP84095 191 aa9.88□□□□□ -0.83
SYNGAP1-207ENST00000628646 GCSAMLQ5JQS6 135 aa9.88□□□□□ -0.83
SYNGAP1-207ENST00000628646 ST6GALNAC6Q969X2 333 aa9.88□□□□□ -0.83
SYNGAP1-207ENST00000628646 ZNF331Q9NQX6 463 aaPredicted RBP9.88□□□□□ -0.83
SYNGAP1-207ENST00000628646 APCP25054 2843 aa9.88□□□□□ -0.83
SYNGAP1-207ENST00000628646 A0A0G2JLM5 398 aa9.88□□□□□ -0.83
SYNGAP1-207ENST00000628646 HIST1H2BKO60814 126 aa9.88□□□□□ -0.83
SYNGAP1-207ENST00000628646 HIST1H2BJP06899 126 aa9.88□□□□□ -0.83
SYNGAP1-207ENST00000628646 HIST1H2BOP23527 126 aa9.88□□□□□ -0.83
SYNGAP1-207ENST00000628646 HIST1H2BBP33778 126 aa9.88□□□□□ -0.83
SYNGAP1-207ENST00000628646 HIST1H2BDP58876 126 aa9.88□□□□□ -0.83
SYNGAP1-207ENST00000628646 HIST1H2BCP62807 126 aa9.88□□□□□ -0.83
SYNGAP1-207ENST00000628646 HIST2H2BEQ16778 126 aa9.88□□□□□ -0.83
SYNGAP1-207ENST00000628646 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.88□□□□□ -0.83
SYNGAP1-207ENST00000628646 HIST1H2BHQ93079 126 aa9.88□□□□□ -0.83
SYNGAP1-207ENST00000628646 HIST1H2BNQ99877 126 aa9.88□□□□□ -0.83
SYNGAP1-207ENST00000628646 HIST1H2BMQ99879 126 aa9.88□□□□□ -0.83
SYNGAP1-207ENST00000628646 RPH3ALQ9UNE2 315 aa9.88□□□□□ -0.83
SYNGAP1-207ENST00000628646 CELSR2Q9HCU4 2923 aa9.88□□□□□ -0.83
SYNGAP1-207ENST00000628646 ATRQ13535 2644 aa9.88□□□□□ -0.83
SYNGAP1-207ENST00000628646 TRAV30A0A087WSZ9 112 aa9.87□□□□□ -0.83
SYNGAP1-207ENST00000628646 SMIM6P0DI80 62 aa9.87□□□□□ -0.83
SYNGAP1-207ENST00000628646 HOXA5P20719 270 aa9.87□□□□□ -0.83
SYNGAP1-207ENST00000628646 IER3P46695 156 aa9.87□□□□□ -0.83
SYNGAP1-207ENST00000628646 SUMO1P63165 101 aaKnown RBP9.87□□□□□ -0.83
SYNGAP1-207ENST00000628646 GAR1Q9NY12 217 aaKnown RBP9.87□□□□□ -0.83
SYNGAP1-207ENST00000628646 IGKV3-7A0A075B6H7 116 aa9.87□□□□□ -0.83
SYNGAP1-207ENST00000628646 SLC25A5P05141 298 aaKnown RBP9.87□□□□□ -0.83
SYNGAP1-207ENST00000628646 MFAP4P55083 255 aa9.87□□□□□ -0.83
SYNGAP1-207ENST00000628646 PAX2Q02962 417 aa9.87□□□□□ -0.83
SYNGAP1-207ENST00000628646 ZNF600Q6ZNG1 722 aa9.87□□□□□ -0.83
SYNGAP1-207ENST00000628646 OR51G1Q8NGK1 321 aa9.87□□□□□ -0.83
SYNGAP1-207ENST00000628646 PYGO2Q9BRQ0 406 aa9.87□□□□□ -0.83
SYNGAP1-207ENST00000628646 LSM4Q9Y4Z0 139 aaKnown RBP9.87□□□□□ -0.83
SYNGAP1-207ENST00000628646 LYZP61626 148 aa9.87□□□□□ -0.83
SYNGAP1-207ENST00000628646 OR5AU1Q8NGC0 362 aa9.87□□□□□ -0.83
SYNGAP1-207ENST00000628646 EEF1AKMT3Q96AZ1 226 aa9.87□□□□□ -0.83
SYNGAP1-207ENST00000628646 AREGP15514 252 aa9.87□□□□□ -0.83
SYNGAP1-207ENST00000628646 FAM3BP58499 235 aaPredicted RBP9.87□□□□□ -0.83
SYNGAP1-207ENST00000628646 TEX38Q6PEX7 206 aa9.87□□□□□ -0.83
SYNGAP1-207ENST00000628646 MGST2Q99735 147 aa9.87□□□□□ -0.83
SYNGAP1-207ENST00000628646 HIGD1AQ9Y241 93 aa9.87□□□□□ -0.83
SYNGAP1-207ENST00000628646 PFN1P07737 140 aaKnown RBP9.86□□□□□ -0.83
SYNGAP1-207ENST00000628646 HIST1H1BP16401 226 aaKnown RBP9.86□□□□□ -0.83
SYNGAP1-207ENST00000628646 RPEL1Q2QD12 228 aa9.86□□□□□ -0.83
SYNGAP1-207ENST00000628646 TENM4Q6N022 2769 aa9.86□□□□□ -0.83
SYNGAP1-207ENST00000628646 TRBV24-1A0A075B6N3 115 aa9.86□□□□□ -0.83
SYNGAP1-207ENST00000628646 GPR183P32249 361 aa9.86□□□□□ -0.83
SYNGAP1-207ENST00000628646 CLEC19AQ6UXS0 136 aa9.86□□□□□ -0.83
SYNGAP1-207ENST00000628646 Q6YL49 198 aa9.86□□□□□ -0.83
SYNGAP1-207ENST00000628646 RPL23P62829 140 aaKnown RBP9.86□□□□□ -0.83
SYNGAP1-207ENST00000628646 RNF114Q9Y508 228 aa9.86□□□□□ -0.83
SYNGAP1-207ENST00000628646 RNASE2P10153 161 aaKnown RBP9.85□□□□□ -0.83
SYNGAP1-207ENST00000628646 ZNF137PP52743 207 aa9.85□□□□□ -0.83
SYNGAP1-207ENST00000628646 FAM209BQ5JX69 171 aa9.85□□□□□ -0.83
SYNGAP1-207ENST00000628646 SRSF8Q9BRL6 282 aaKnown RBP9.85□□□□□ -0.83
SYNGAP1-207ENST00000628646 MEGF9Q9H1U4 602 aa9.85□□□□□ -0.83
SYNGAP1-207ENST00000628646 OR51M1Q9H341 326 aa9.85□□□□□ -0.83
SYNGAP1-207ENST00000628646 TRAPPC1Q9Y5R8 145 aa9.85□□□□□ -0.83
SYNGAP1-207ENST00000628646 ARL2-SNX15V9GYD0 113 aa9.85□□□□□ -0.83
SYNGAP1-207ENST00000628646 LCNL1Q6ZST4 164 aa9.85□□□□□ -0.83
SYNGAP1-207ENST00000628646 C21orf62Q9NYP8 219 aa9.85□□□□□ -0.83
SYNGAP1-207ENST00000628646 IGHV3OR16-8A0A075B7F1 116 aa9.85□□□□□ -0.83
SYNGAP1-207ENST00000628646 TRGC2P03986 189 aa9.85□□□□□ -0.83
SYNGAP1-207ENST00000628646 OR10J4P0C629 311 aa9.85□□□□□ -0.83
SYNGAP1-207ENST00000628646 AAMDCQ9H7C9 122 aa9.85□□□□□ -0.83
SYNGAP1-207ENST00000628646 GATCO43716 136 aaKnown RBP9.85□□□□□ -0.83
SYNGAP1-207ENST00000628646 WDR73Q6P4I2 378 aa9.85□□□□□ -0.83
SYNGAP1-207ENST00000628646 NDUFA4L2Q9NRX3 87 aa9.85□□□□□ -0.83
SYNGAP1-207ENST00000628646 CRLF1O75462 422 aa9.84□□□□□ -0.83
SYNGAP1-207ENST00000628646 OR1P1Q8NH06 330 aa9.84□□□□□ -0.83
SYNGAP1-207ENST00000628646 HLA-DRB1P01911 266 aa9.84□□□□□ -0.83
SYNGAP1-207ENST00000628646 CT45A10P0DMU9 189 aa9.84□□□□□ -0.83
SYNGAP1-207ENST00000628646 KLHDC1Q8N7A1 406 aa9.84□□□□□ -0.83
SYNGAP1-207ENST00000628646 Q8N9W7 124 aa9.84□□□□□ -0.83
SYNGAP1-207ENST00000628646 DYNLRB2Q8TF09 96 aa9.84□□□□□ -0.83
SYNGAP1-207ENST00000628646 TMEM190Q8WZ59 177 aa9.84□□□□□ -0.83
SYNGAP1-207ENST00000628646 TMEM18Q96B42 140 aa9.84□□□□□ -0.83
SYNGAP1-207ENST00000628646 A0A1W2PRE2 83 aa9.84□□□□□ -0.83
SYNGAP1-207ENST00000628646 GAMTQ14353 236 aa9.84□□□□□ -0.83
SYNGAP1-207ENST00000628646 C15orf32Q32M92 178 aa9.84□□□□□ -0.83
SYNGAP1-207ENST00000628646 LDLRAD2Q5SZI1 272 aa9.84□□□□□ -0.83
SYNGAP1-207ENST00000628646 SRD5A3Q9H8P0 318 aa9.84□□□□□ -0.83
SYNGAP1-207ENST00000628646 A6NDX4 124 aa9.83□□□□□ -0.84
SYNGAP1-207ENST00000628646 CDX1P47902 265 aaPredicted RBP9.83□□□□□ -0.84
SYNGAP1-207ENST00000628646 GFI1BQ5VTD9 330 aa9.83□□□□□ -0.84
SYNGAP1-207ENST00000628646 KLHL30-AS1Q8NEE0 82 aa9.83□□□□□ -0.84
SYNGAP1-207ENST00000628646 SGMS2Q8NHU3 365 aa9.83□□□□□ -0.84
SYNGAP1-207ENST00000628646 BLNKQ8WV28 456 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms