RNA–Protein interactions for RNA: ENST00000622697.4

GABRB3-215, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 5,876 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-215ENST00000622697 DEFB104AQ8WTQ1 72 aa13.18□□□□□ -0.3
GABRB3-215ENST00000622697 TMEM219Q86XT9 240 aa13.18□□□□□ -0.3
GABRB3-215ENST00000622697 RAX2Q96IS3 184 aa13.18□□□□□ -0.3
GABRB3-215ENST00000622697 TMEM167AQ8TBQ9 72 aa13.18□□□□□ -0.3
GABRB3-215ENST00000622697 PSMB11A5LHX3 300 aa13.18□□□□□ -0.3
GABRB3-215ENST00000622697 UBE2L6O14933 153 aa13.18□□□□□ -0.3
GABRB3-215ENST00000622697 CACNG7P62955 275 aa13.18□□□□□ -0.3
GABRB3-215ENST00000622697 NCR2O95944 276 aa13.17□□□□□ -0.3
GABRB3-215ENST00000622697 TSPOP30536 169 aa13.17□□□□□ -0.3
GABRB3-215ENST00000622697 ADIPOQQ15848 244 aa13.17□□□□□ -0.3
GABRB3-215ENST00000622697 C19orf54Q5BKX5 351 aa13.17□□□□□ -0.3
GABRB3-215ENST00000622697 NUP35Q8NFH5 326 aa13.17□□□□□ -0.3
GABRB3-215ENST00000622697 ZNF256Q9Y2P7 627 aaPredicted RBP13.17□□□□□ -0.3
GABRB3-215ENST00000622697 RNASE2P10153 161 aaKnown RBP13.17□□□□□ -0.3
GABRB3-215ENST00000622697 ZNF138P52744 262 aa13.17□□□□□ -0.3
GABRB3-215ENST00000622697 SHANK1Q9Y566 2161 aa13.17□□□□□ -0.3
GABRB3-215ENST00000622697 A0A1B0GW15 77 aa13.16□□□□□ -0.3
GABRB3-215ENST00000622697 MCRIP2Q9BUT9 160 aaKnown RBP13.16□□□□□ -0.3
GABRB3-215ENST00000622697 TCRAP04437 139 aa13.16□□□□□ -0.3
GABRB3-215ENST00000622697 SFTA2Q6UW10 78 aa13.16□□□□□ -0.3
GABRB3-215ENST00000622697 TGFAP01135 160 aa13.16□□□□□ -0.3
GABRB3-215ENST00000622697 COL8A2P25067 703 aa13.16□□□□□ -0.3
GABRB3-215ENST00000622697 H3BUT2 72 aa13.16□□□□□ -0.3
GABRB3-215ENST00000622697 ZNF664Q8N3J9 261 aa13.16□□□□□ -0.3
GABRB3-215ENST00000622697 JKAMPQ9P055 326 aa13.16□□□□□ -0.3
GABRB3-215ENST00000622697 ATP5LO75964 103 aa13.15□□□□□ -0.3
GABRB3-215ENST00000622697 VMO1Q7Z5L0 202 aa13.15□□□□□ -0.3
GABRB3-215ENST00000622697 Q8TAT8 98 aa13.15□□□□□ -0.3
GABRB3-215ENST00000622697 TNFSF13O75888 250 aa13.15□□□□□ -0.3
GABRB3-215ENST00000622697 FAM181BA6NEQ2 426 aa13.15□□□□□ -0.3
GABRB3-215ENST00000622697 C15orf32Q32M92 178 aa13.15□□□□□ -0.3
GABRB3-215ENST00000622697 OR5AN1Q8NGI8 311 aa13.15□□□□□ -0.3
GABRB3-215ENST00000622697 TTC9CQ8N5M4 171 aa13.15□□□□□ -0.31
GABRB3-215ENST00000622697 MRPL16Q9NX20 251 aaKnown RBP13.15□□□□□ -0.31
GABRB3-215ENST00000622697 DOPEY2Q9Y3R5 2298 aa13.14□□□□□ -0.31
GABRB3-215ENST00000622697 CACNA1BQ00975 2339 aa13.14□□□□□ -0.31
GABRB3-215ENST00000622697 TRAV40A0A0B4J280 105 aa13.14□□□□□ -0.31
GABRB3-215ENST00000622697 A0A0G2JLM5 398 aa13.14□□□□□ -0.31
GABRB3-215ENST00000622697 ZNF418Q8TF45 676 aaPredicted RBP13.14□□□□□ -0.31
GABRB3-215ENST00000622697 TNFRSF14Q92956 283 aa13.14□□□□□ -0.31
GABRB3-215ENST00000622697 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.14□□□□□ -0.31
GABRB3-215ENST00000622697 HBDP02042 147 aa13.14□□□□□ -0.31
GABRB3-215ENST00000622697 ASPHD1Q5U4P2 390 aa13.14□□□□□ -0.31
GABRB3-215ENST00000622697 FNDC4Q9H6D8 234 aaPredicted RBP13.14□□□□□ -0.31
GABRB3-215ENST00000622697 GEMIN7Q9H840 131 aaKnown RBP13.14□□□□□ -0.31
GABRB3-215ENST00000622697 SIGLEC9Q9Y336 463 aa13.14□□□□□ -0.31
GABRB3-215ENST00000622697 A0A1B0GWJ7 208 aa13.14□□□□□ -0.31
GABRB3-215ENST00000622697 IGLV3-1P01715 115 aa13.14□□□□□ -0.31
GABRB3-215ENST00000622697 TYMSP04818 313 aa13.14□□□□□ -0.31
GABRB3-215ENST00000622697 TPTE2P1Q5T6R2 138 aa13.14□□□□□ -0.31
GABRB3-215ENST00000622697 ITLN2Q8WWU7 325 aaPredicted RBP13.14□□□□□ -0.31
GABRB3-215ENST00000622697 APOMO95445 188 aa13.13□□□□□ -0.31
GABRB3-215ENST00000622697 BUB1B-PAK6H3BSN5 160 aa13.13□□□□□ -0.31
GABRB3-215ENST00000622697 PRR30Q53SZ7 412 aaPredicted RBP13.13□□□□□ -0.31
GABRB3-215ENST00000622697 D6R8Y8 96 aa13.13□□□□□ -0.31
GABRB3-215ENST00000622697 CD7P09564 240 aa13.13□□□□□ -0.31
GABRB3-215ENST00000622697 COX6CP09669 75 aa13.13□□□□□ -0.31
GABRB3-215ENST00000622697 HAPLN4Q86UW8 402 aa13.13□□□□□ -0.31
GABRB3-215ENST00000622697 hDV102S1A0JD36 115 aa13.13□□□□□ -0.31
GABRB3-215ENST00000622697 C3orf79P0CE67 100 aa13.13□□□□□ -0.31
GABRB3-215ENST00000622697 C1orf194Q5T5A4 169 aa13.13□□□□□ -0.31
GABRB3-215ENST00000622697 KIAA1671Q9BY89 1806 aa13.13□□□□□ -0.31
GABRB3-215ENST00000622697 NDPQ00604 133 aa13.13□□□□□ -0.31
GABRB3-215ENST00000622697 LYZL1Q6UWQ5 148 aa13.13□□□□□ -0.31
GABRB3-215ENST00000622697 NUP37Q8NFH4 326 aa13.13□□□□□ -0.31
GABRB3-215ENST00000622697 TRGV9Q99603 122 aa13.13□□□□□ -0.31
GABRB3-215ENST00000622697 SPCS1Q9Y6A9 102 aa13.13□□□□□ -0.31
GABRB3-215ENST00000622697 CNTFRP26992 372 aa13.12□□□□□ -0.31
GABRB3-215ENST00000622697 Q6ZS92 163 aa13.12□□□□□ -0.31
GABRB3-215ENST00000622697 A0A1W2PRX2 142 aa13.12□□□□□ -0.31
GABRB3-215ENST00000622697 LMO1P25800 156 aa13.12□□□□□ -0.31
GABRB3-215ENST00000622697 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.12□□□□□ -0.31
GABRB3-215ENST00000622697 ALKBH7Q9BT30 221 aaPredicted RBP13.12□□□□□ -0.31
GABRB3-215ENST00000622697 NPFFO15130 113 aa13.12□□□□□ -0.31
GABRB3-215ENST00000622697 MEIG1Q5JSS6 88 aa13.12□□□□□ -0.31
GABRB3-215ENST00000622697 ATP5L2Q7Z4Y8 100 aa13.12□□□□□ -0.31
GABRB3-215ENST00000622697 NAA38Q9BRA0 125 aaKnown RBP13.12□□□□□ -0.31
GABRB3-215ENST00000622697 SLC50A1Q9BRV3 221 aa13.12□□□□□ -0.31
GABRB3-215ENST00000622697 MED13LQ71F56 2210 aa13.12□□□□□ -0.31
GABRB3-215ENST00000622697 A0A1W2PPI3 338 aa13.11□□□□□ -0.31
GABRB3-215ENST00000622697 PFN1P07737 140 aaKnown RBP13.11□□□□□ -0.31
GABRB3-215ENST00000622697 ZNF329Q86UD4 541 aa13.11□□□□□ -0.31
GABRB3-215ENST00000622697 DUX3Q96PT4 197 aa13.11□□□□□ -0.31
GABRB3-215ENST00000622697 C10orf91Q5T1B1 145 aa13.11□□□□□ -0.31
GABRB3-215ENST00000622697 TNFRSF18Q9Y5U5 241 aa13.11□□□□□ -0.31
GABRB3-215ENST00000622697 ZNF134P52741 427 aa13.11□□□□□ -0.31
GABRB3-215ENST00000622697 ERVK11-1P61568 191 aa13.11□□□□□ -0.31
GABRB3-215ENST00000622697 IL15RAQ13261 267 aa13.11□□□□□ -0.31
GABRB3-215ENST00000622697 JMJD8Q96S16 334 aa13.11□□□□□ -0.31
GABRB3-215ENST00000622697 NHP2Q9NX24 153 aaKnown RBP13.11□□□□□ -0.31
GABRB3-215ENST00000622697 BRD3OSQ6XYD6 125 aa13.11□□□□□ -0.31
GABRB3-215ENST00000622697 CHCHD1Q96BP2 118 aaKnown RBP13.11□□□□□ -0.31
GABRB3-215ENST00000622697 ABCA1O95477 2261 aa13.1□□□□□ -0.31
GABRB3-215ENST00000622697 E7EQL1 145 aa13.1□□□□□ -0.31
GABRB3-215ENST00000622697 SUMO2P61956 95 aaKnown RBP13.1□□□□□ -0.31
GABRB3-215ENST00000622697 PAX8Q06710 450 aa13.1□□□□□ -0.31
GABRB3-215ENST00000622697 ZNF114Q8NC26 417 aa13.1□□□□□ -0.31
GABRB3-215ENST00000622697 IFI27L1Q96BM0 104 aa13.1□□□□□ -0.31
GABRB3-215ENST00000622697 MMP23AO75900 390 aa13.09□□□□□ -0.31
GABRB3-215ENST00000622697 LSM4Q9Y4Z0 139 aaKnown RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms