RNA–Protein interactions for RNA: ENST00000622138.4

TRIM49B-202, Transcript of tripartite motif containing 49B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49B, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49B-202ENST00000622138 PPP1R35Q8TAP8 253 aa6.07□□□□□ -1.44
TRIM49B-202ENST00000622138 NRGNQ92686 78 aa6.07□□□□□ -1.44
TRIM49B-202ENST00000622138 TMUB1Q9BVT8 246 aa6.07□□□□□ -1.44
TRIM49B-202ENST00000622138 MAP1LC3AQ9H492 121 aa6.07□□□□□ -1.44
TRIM49B-202ENST00000622138 PLEKHA3Q9HB20 300 aa6.07□□□□□ -1.44
TRIM49B-202ENST00000622138 NHP2Q9NX24 153 aaKnown RBP6.07□□□□□ -1.44
TRIM49B-202ENST00000622138 ZDBF2Q9HCK1 2354 aa6.07□□□□□ -1.44
TRIM49B-202ENST00000622138 K7ERJ3 54 aa6.07□□□□□ -1.44
TRIM49B-202ENST00000622138 RPS16P62249 146 aaKnown RBP6.07□□□□□ -1.44
TRIM49B-202ENST00000622138 RPL30P62888 115 aaKnown RBP6.07□□□□□ -1.44
TRIM49B-202ENST00000622138 RRN3P1Q2M238 152 aa6.07□□□□□ -1.44
TRIM49B-202ENST00000622138 CFAP126Q5VTH2 177 aa6.07□□□□□ -1.44
TRIM49B-202ENST00000622138 RPRMLQ8N4K4 120 aa6.07□□□□□ -1.44
TRIM49B-202ENST00000622138 GFRA4Q9GZZ7 299 aa6.07□□□□□ -1.44
TRIM49B-202ENST00000622138 MED13Q9UHV7 2174 aa6.07□□□□□ -1.44
TRIM49B-202ENST00000622138 TRAV5A0A0B4J249 113 aa6.06□□□□□ -1.44
TRIM49B-202ENST00000622138 A0A1W2PNU3 283 aaPredicted RBP6.06□□□□□ -1.44
TRIM49B-202ENST00000622138 NPIPB6E9PJ23 425 aa6.06□□□□□ -1.44
TRIM49B-202ENST00000622138 CCDC179H3BU77 68 aa6.06□□□□□ -1.44
TRIM49B-202ENST00000622138 SLC25A5P05141 298 aaKnown RBP6.06□□□□□ -1.44
TRIM49B-202ENST00000622138 MPV17P39210 176 aa6.06□□□□□ -1.44
TRIM49B-202ENST00000622138 TRAT1Q6PIZ9 186 aa6.06□□□□□ -1.44
TRIM49B-202ENST00000622138 C6orf15Q6UXA7 325 aaPredicted RBP6.06□□□□□ -1.44
TRIM49B-202ENST00000622138 FAM214BQ7L5A3 538 aa6.06□□□□□ -1.44
TRIM49B-202ENST00000622138 H2BFWTQ7Z2G1 175 aa6.06□□□□□ -1.44
TRIM49B-202ENST00000622138 TMEM116Q8NCL8 245 aa6.06□□□□□ -1.44
TRIM49B-202ENST00000622138 FAM173AQ9BQD7 235 aa6.06□□□□□ -1.44
TRIM49B-202ENST00000622138 TTTY12Q9BZ98 90 aa6.06□□□□□ -1.44
TRIM49B-202ENST00000622138 C7orf69Q9H7B7 122 aa6.06□□□□□ -1.44
TRIM49B-202ENST00000622138 CSDC2Q9Y534 153 aaKnown RBP6.06□□□□□ -1.44
TRIM49B-202ENST00000622138 GPR179Q6PRD1 2367 aa6.06□□□□□ -1.44
TRIM49B-202ENST00000622138 FAM90A27PA6NNH2 459 aa6.06□□□□□ -1.44
TRIM49B-202ENST00000622138 NPIPB5A8MRT5 1133 aa6.06□□□□□ -1.44
TRIM49B-202ENST00000622138 J3QT63 122 aa6.06□□□□□ -1.44
TRIM49B-202ENST00000622138 CHEK1O14757 476 aa6.06□□□□□ -1.44
TRIM49B-202ENST00000622138 OR2H2O95918 312 aa6.06□□□□□ -1.44
TRIM49B-202ENST00000622138 TFF1P04155 84 aa6.06□□□□□ -1.44
TRIM49B-202ENST00000622138 PRTN3P24158 256 aa6.06□□□□□ -1.44
TRIM49B-202ENST00000622138 NMUP48645 174 aa6.06□□□□□ -1.44
TRIM49B-202ENST00000622138 MEOX1P50221 254 aa6.06□□□□□ -1.44
TRIM49B-202ENST00000622138 PRR20EP86478 221 aa6.06□□□□□ -1.44
TRIM49B-202ENST00000622138 PRR20CP86479 221 aa6.06□□□□□ -1.44
TRIM49B-202ENST00000622138 PRR20DP86480 221 aa6.06□□□□□ -1.44
TRIM49B-202ENST00000622138 PRR20BP86481 221 aa6.06□□□□□ -1.44
TRIM49B-202ENST00000622138 PRR20AP86496 221 aa6.06□□□□□ -1.44
TRIM49B-202ENST00000622138 DIAPH2-AS1Q14236 149 aa6.06□□□□□ -1.44
TRIM49B-202ENST00000622138 LPAL2Q16609 132 aa6.06□□□□□ -1.44
TRIM49B-202ENST00000622138 ALKBH6Q3KRA9 238 aa6.06□□□□□ -1.44
TRIM49B-202ENST00000622138 TM4SF20Q53R12 229 aa6.06□□□□□ -1.44
TRIM49B-202ENST00000622138 PRR30Q53SZ7 412 aaPredicted RBP6.06□□□□□ -1.44
TRIM49B-202ENST00000622138 ZNF497Q6ZNH5 498 aa6.06□□□□□ -1.44
TRIM49B-202ENST00000622138 MIR17HGQ75NE6 70 aa6.06□□□□□ -1.44
TRIM49B-202ENST00000622138 MDP1Q86V88 176 aa6.06□□□□□ -1.44
TRIM49B-202ENST00000622138 F11RQ9Y624 299 aaKnown RBP6.06□□□□□ -1.44
TRIM49B-202ENST00000622138 URB1O60287 2271 aaKnown RBP6.05□□□□□ -1.44
TRIM49B-202ENST00000622138 USF3Q68DE3 2245 aa6.05□□□□□ -1.44
TRIM49B-202ENST00000622138 APOHP02749 345 aaPredicted RBP6.05□□□□□ -1.44
TRIM49B-202ENST00000622138 RBP4P02753 201 aa6.05□□□□□ -1.44
TRIM49B-202ENST00000622138 ZNF688P0C7X2 276 aa6.05□□□□□ -1.44
TRIM49B-202ENST00000622138 OR1C1Q15619 314 aa6.05□□□□□ -1.44
TRIM49B-202ENST00000622138 LINC00696Q6ZRV3 163 aa6.05□□□□□ -1.44
TRIM49B-202ENST00000622138 PCP2Q8IVA1 136 aa6.05□□□□□ -1.44
TRIM49B-202ENST00000622138 GATD1Q8NB37 220 aa6.05□□□□□ -1.44
TRIM49B-202ENST00000622138 SSMEM1Q8WWF3 244 aa6.05□□□□□ -1.44
TRIM49B-202ENST00000622138 DLX4Q92988 240 aaPredicted RBP6.05□□□□□ -1.44
TRIM49B-202ENST00000622138 RPEQ96AT9 228 aa6.05□□□□□ -1.44
TRIM49B-202ENST00000622138 PPDPFQ9H3Y8 114 aa6.05□□□□□ -1.44
TRIM49B-202ENST00000622138 RPP21Q9H633 154 aaKnown RBP6.05□□□□□ -1.44
TRIM49B-202ENST00000622138 PRRC2CQ9Y520 2896 aaKnown RBP6.05□□□□□ -1.44
TRIM49B-202ENST00000622138 TMEM213A2RRL7 107 aa6.04□□□□□ -1.44
TRIM49B-202ENST00000622138 IFITM1P13164 125 aa6.04□□□□□ -1.44
TRIM49B-202ENST00000622138 CACNG7P62955 275 aa6.04□□□□□ -1.44
TRIM49B-202ENST00000622138 ZNF816Q0VGE8 651 aaPredicted RBP6.04□□□□□ -1.44
TRIM49B-202ENST00000622138 GAGE2BQ13066 116 aa6.04□□□□□ -1.44
TRIM49B-202ENST00000622138 EIF4EBP1Q13541 118 aaPredicted RBP6.04□□□□□ -1.44
TRIM49B-202ENST00000622138 GAGE2EQ4V326 116 aa6.04□□□□□ -1.44
TRIM49B-202ENST00000622138 RBPMS2Q6ZRY4 209 aaKnown RBP6.04□□□□□ -1.44
TRIM49B-202ENST00000622138 TEN1Q86WV5 123 aa6.04□□□□□ -1.44
TRIM49B-202ENST00000622138 COQ2Q96H96 371 aa6.04□□□□□ -1.44
TRIM49B-202ENST00000622138 MRPL32Q9BYC8 188 aaKnown RBP6.04□□□□□ -1.44
TRIM49B-202ENST00000622138 ZNF492Q9P255 531 aa6.04□□□□□ -1.44
TRIM49B-202ENST00000622138 GAGE2DQ9UEU5 116 aa6.04□□□□□ -1.44
TRIM49B-202ENST00000622138 TCF19Q9Y242 345 aa6.04□□□□□ -1.44
TRIM49B-202ENST00000622138 NBEAQ8NFP9 2946 aa6.04□□□□□ -1.44
TRIM49B-202ENST00000622138 ASIPP42127 132 aa6.04□□□□□ -1.44
TRIM49B-202ENST00000622138 BRWD1-AS2P59051 145 aa6.04□□□□□ -1.44
TRIM49B-202ENST00000622138 C12orf74Q32Q52 190 aa6.04□□□□□ -1.44
TRIM49B-202ENST00000622138 TMEM78Q5T7P6 136 aa6.04□□□□□ -1.44
TRIM49B-202ENST00000622138 LYRM7Q5U5X0 104 aa6.04□□□□□ -1.44
TRIM49B-202ENST00000622138 NFE4Q86UQ8 179 aa6.04□□□□□ -1.44
TRIM49B-202ENST00000622138 ABHD12Q8N2K0 398 aa6.04□□□□□ -1.44
TRIM49B-202ENST00000622138 OR8A1Q8NGG7 326 aa6.04□□□□□ -1.44
TRIM49B-202ENST00000622138 GLMPQ8WWB7 406 aa6.04□□□□□ -1.44
TRIM49B-202ENST00000622138 RND1Q92730 232 aa6.04□□□□□ -1.44
TRIM49B-202ENST00000622138 ZNF414Q96IQ9 312 aa6.04□□□□□ -1.44
TRIM49B-202ENST00000622138 DNAJC30Q96LL9 226 aa6.04□□□□□ -1.44
TRIM49B-202ENST00000622138 CDX2Q99626 313 aaPredicted RBP6.04□□□□□ -1.44
TRIM49B-202ENST00000622138 SPRY4Q9C004 299 aa6.04□□□□□ -1.44
TRIM49B-202ENST00000622138 PRR14LQ5THK1 2151 aa6.03□□□□□ -1.44
TRIM49B-202ENST00000622138 LINC01619G3V211 115 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms