RNA–Protein interactions for RNA: ENST00000621856.1

SPAST-204, Transcript of spastin, humanhuman

TSL 1 (best) BASIC

Gene SPAST, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-204ENST00000621856 TRBV7-1A0A0A6YYK4 115 aa16.7■□□□□ 0.26
SPAST-204ENST00000621856 CLEC19AQ6UXS0 136 aa16.7■□□□□ 0.26
SPAST-204ENST00000621856 S100A7AQ86SG5 101 aa16.7■□□□□ 0.26
SPAST-204ENST00000621856 TMA7Q9Y2S6 64 aaKnown RBP16.7■□□□□ 0.26
SPAST-204ENST00000621856 H3BUA1 57 aa16.7■□□□□ 0.26
SPAST-204ENST00000621856 HOXA3O43365 443 aaPredicted RBP16.7■□□□□ 0.26
SPAST-204ENST00000621856 CLEC3BP05452 202 aa16.7■□□□□ 0.26
SPAST-204ENST00000621856 TPPP2P59282 170 aa16.7■□□□□ 0.26
SPAST-204ENST00000621856 CCDC140Q96MF4 163 aa16.7■□□□□ 0.26
SPAST-204ENST00000621856 SHANK2-AS3Q9BTD1 123 aa16.7■□□□□ 0.26
SPAST-204ENST00000621856 GNB4Q9HAV0 340 aa16.7■□□□□ 0.26
SPAST-204ENST00000621856 SMCO4Q9NRQ5 59 aa16.7■□□□□ 0.26
SPAST-204ENST00000621856 CSMD1Q96PZ7 3565 aa16.69■□□□□ 0.26
SPAST-204ENST00000621856 H3BRN7 92 aa16.69■□□□□ 0.26
SPAST-204ENST00000621856 PPIFP30405 207 aaKnown RBP16.69■□□□□ 0.26
SPAST-204ENST00000621856 ADMP35318 185 aa16.69■□□□□ 0.26
SPAST-204ENST00000621856 USF2Q15853 346 aaPredicted RBP16.69■□□□□ 0.26
SPAST-204ENST00000621856 CCDC168Q8NDH2 2452 aa16.69■□□□□ 0.26
SPAST-204ENST00000621856 GGTLC3B5MD39 225 aa16.68■□□□□ 0.26
SPAST-204ENST00000621856 SNRPCP09234 159 aaKnown RBP16.68■□□□□ 0.26
SPAST-204ENST00000621856 GP9P14770 177 aa16.68■□□□□ 0.26
SPAST-204ENST00000621856 SRP14P37108 136 aaKnown RBP16.68■□□□□ 0.26
SPAST-204ENST00000621856 SUMO1P63165 101 aaKnown RBP16.68■□□□□ 0.26
SPAST-204ENST00000621856 ADIRFQ15847 76 aa16.68■□□□□ 0.26
SPAST-204ENST00000621856 ZNF600Q6ZNG1 722 aa16.68■□□□□ 0.26
SPAST-204ENST00000621856 BLNKQ8WV28 456 aa16.68■□□□□ 0.26
SPAST-204ENST00000621856 DERL1Q9BUN8 251 aa16.68■□□□□ 0.26
SPAST-204ENST00000621856 PRDM13Q9H4Q3 707 aa16.68■□□□□ 0.26
SPAST-204ENST00000621856 UNC79Q9P2D8 2635 aa16.68■□□□□ 0.26
SPAST-204ENST00000621856 PF4V1P10720 104 aa16.67■□□□□ 0.26
SPAST-204ENST00000621856 C11orf52Q96A22 123 aa16.67■□□□□ 0.26
SPAST-204ENST00000621856 B4DEV8 164 aa16.67■□□□□ 0.26
SPAST-204ENST00000621856 TSPAN4O14817 238 aa16.67■□□□□ 0.26
SPAST-204ENST00000621856 TGOLN2O43493 480 aa16.67■□□□□ 0.26
SPAST-204ENST00000621856 NBEAP1P0C6P0 100 aa16.67■□□□□ 0.26
SPAST-204ENST00000621856 TMEM95Q3KNT9 176 aa16.67■□□□□ 0.26
SPAST-204ENST00000621856 SIGLECL1Q8N7X8 197 aa16.67■□□□□ 0.26
SPAST-204ENST00000621856 TMEM14CQ9P0S9 112 aa16.67■□□□□ 0.26
SPAST-204ENST00000621856 IGHV3-35A0A0C4DH35 117 aa16.66■□□□□ 0.26
SPAST-204ENST00000621856 CD5LO43866 347 aa16.66■□□□□ 0.26
SPAST-204ENST00000621856 BRI3O95415 125 aa16.66■□□□□ 0.26
SPAST-204ENST00000621856 ZNF580Q9UK33 172 aa16.66■□□□□ 0.26
SPAST-204ENST00000621856 TEX15Q9BXT5 2789 aa16.66■□□□□ 0.26
SPAST-204ENST00000621856 CRYBB3P26998 211 aa16.65■□□□□ 0.26
SPAST-204ENST00000621856 RPL23P62829 140 aaKnown RBP16.65■□□□□ 0.26
SPAST-204ENST00000621856 PRSS22Q9GZN4 317 aa16.65■□□□□ 0.26
SPAST-204ENST00000621856 YAE1D1Q9NRH1 226 aa16.65■□□□□ 0.26
SPAST-204ENST00000621856 RABAC1Q9UI14 185 aa16.65■□□□□ 0.26
SPAST-204ENST00000621856 ZNF98A6NK75 572 aa16.65■□□□□ 0.26
SPAST-204ENST00000621856 BMPR1BO00238 502 aa16.65■□□□□ 0.26
SPAST-204ENST00000621856 RANP62826 216 aaKnown RBP16.65■□□□□ 0.26
SPAST-204ENST00000621856 BPIFA4PQ86YQ2 179 aa16.65■□□□□ 0.26
SPAST-204ENST00000621856 USMG5Q96IX5 58 aa16.65■□□□□ 0.26
SPAST-204ENST00000621856 ATP6V0BQ99437 205 aa16.65■□□□□ 0.26
SPAST-204ENST00000621856 ELOVL1Q9BW60 279 aa16.65■□□□□ 0.26
SPAST-204ENST00000621856 NPFFR1Q9GZQ6 430 aa16.65■□□□□ 0.26
SPAST-204ENST00000621856 A0A087WWC5 75 aa16.64■□□□□ 0.25
SPAST-204ENST00000621856 KRTAP1-1Q07627 177 aa16.64■□□□□ 0.25
SPAST-204ENST00000621856 ZNF329Q86UD4 541 aa16.64■□□□□ 0.25
SPAST-204ENST00000621856 H3BTX0 84 aa16.63■□□□□ 0.25
SPAST-204ENST00000621856 IGLV1-40P01703 118 aa16.63■□□□□ 0.25
SPAST-204ENST00000621856 HIST1H1EP10412 219 aaKnown RBP16.63■□□□□ 0.25
SPAST-204ENST00000621856 S100A7P31151 101 aa16.63■□□□□ 0.25
SPAST-204ENST00000621856 CFHR3Q02985 330 aa16.63■□□□□ 0.25
SPAST-204ENST00000621856 RELQ04864 619 aaPredicted RBP16.63■□□□□ 0.25
SPAST-204ENST00000621856 ZNF343Q6P1L6 599 aa16.63■□□□□ 0.25
SPAST-204ENST00000621856 TOMM20LQ6UXN7 152 aa16.63■□□□□ 0.25
SPAST-204ENST00000621856 OR4F17Q8NGA8 305 aa16.63■□□□□ 0.25
SPAST-204ENST00000621856 KLK15Q9H2R5 256 aa16.63■□□□□ 0.25
SPAST-204ENST00000621856 ITPR2Q14571 2701 aa16.63■□□□□ 0.25
SPAST-204ENST00000621856 DUX5Q96PT3 197 aa16.62■□□□□ 0.25
SPAST-204ENST00000621856 IGHV3OR16-8A0A075B7F1 116 aa16.62■□□□□ 0.25
SPAST-204ENST00000621856 PPP5D1E7EU14 171 aa16.62■□□□□ 0.25
SPAST-204ENST00000621856 ISOC2Q96AB3 205 aa16.62■□□□□ 0.25
SPAST-204ENST00000621856 ZNF586Q9NXT0 402 aa16.62■□□□□ 0.25
SPAST-204ENST00000621856 RNF24Q9Y225 148 aa16.62■□□□□ 0.25
SPAST-204ENST00000621856 FLNAP21333 2647 aaKnown RBP16.61■□□□□ 0.25
SPAST-204ENST00000621856 ZFHX3Q15911 3703 aa16.61■□□□□ 0.25
SPAST-204ENST00000621856 ARL3P36405 182 aa16.61■□□□□ 0.25
SPAST-204ENST00000621856 RPL35P42766 123 aaKnown RBP16.61■□□□□ 0.25
SPAST-204ENST00000621856 ZNF414Q96IQ9 312 aa16.61■□□□□ 0.25
SPAST-204ENST00000621856 TUBA4BQ9H853 241 aa16.61■□□□□ 0.25
SPAST-204ENST00000621856 ZFAND3Q9H8U3 227 aa16.61■□□□□ 0.25
SPAST-204ENST00000621856 A0A0G2JLM5 398 aa16.6■□□□□ 0.25
SPAST-204ENST00000621856 PGPA6NDG6 321 aa16.6■□□□□ 0.25
SPAST-204ENST00000621856 HELTA6NFD8 242 aa16.6■□□□□ 0.25
SPAST-204ENST00000621856 IGHV3-11P01762 117 aa16.6■□□□□ 0.25
SPAST-204ENST00000621856 SLC25A5P05141 298 aaKnown RBP16.6■□□□□ 0.25
SPAST-204ENST00000621856 RAB9AP51151 201 aa16.6■□□□□ 0.25
SPAST-204ENST00000621856 RNF212Q495C1 297 aa16.6■□□□□ 0.25
SPAST-204ENST00000621856 LCNL1Q6ZST4 164 aa16.6■□□□□ 0.25
SPAST-204ENST00000621856 ZNF702PQ9H963 129 aa16.6■□□□□ 0.25
SPAST-204ENST00000621856 TRBV20OR9-2A0A075B6H5 130 aa16.59■□□□□ 0.25
SPAST-204ENST00000621856 MT-ND4LP03901 98 aa16.59■□□□□ 0.25
SPAST-204ENST00000621856 HNF1AP20823 631 aa16.59■□□□□ 0.25
SPAST-204ENST00000621856 LINC01551Q86U37 167 aa16.59■□□□□ 0.25
SPAST-204ENST00000621856 C15orf54Q8N8G6 183 aa16.59■□□□□ 0.25
SPAST-204ENST00000621856 C2CD4CQ8TF44 421 aa16.59■□□□□ 0.25
SPAST-204ENST00000621856 Q9H3A6 140 aa16.59■□□□□ 0.25
SPAST-204ENST00000621856 AURKAIP1Q9NWT8 199 aaPredicted RBP16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms