RNA–Protein interactions for RNA: ENST00000621747.5

VEGFA-229, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-229ENST00000621747 SSSCA1O60232 199 aa18.31■□□□□ 0.52
VEGFA-229ENST00000621747 HLA-DRB4P13762 266 aa18.31■□□□□ 0.52
VEGFA-229ENST00000621747 S100A7P31151 101 aa18.31■□□□□ 0.52
VEGFA-229ENST00000621747 SAMD13Q5VXD3 122 aa18.31■□□□□ 0.52
VEGFA-229ENST00000621747 WDR12Q9GZL7 423 aaKnown RBP18.31■□□□□ 0.52
VEGFA-229ENST00000621747 TBC1D24Q9ULP9 559 aa18.31■□□□□ 0.52
VEGFA-229ENST00000621747 HLA-DRB4X5D2U9 266 aa18.31■□□□□ 0.52
VEGFA-229ENST00000621747 IGHV4-28A0A0C4DH34 117 aa18.3■□□□□ 0.52
VEGFA-229ENST00000621747 TMEM144Q7Z5S9 345 aa18.3■□□□□ 0.52
VEGFA-229ENST00000621747 CSNK1G2-AS1Q8NCQ2 148 aa18.3■□□□□ 0.52
VEGFA-229ENST00000621747 SMIM8Q96KF7 97 aa18.3■□□□□ 0.52
VEGFA-229ENST00000621747 LINC00052Q96N35 136 aa18.3■□□□□ 0.52
VEGFA-229ENST00000621747 AGRNO00468 2067 aa18.3■□□□□ 0.52
VEGFA-229ENST00000621747 SMCO3A2RU48 225 aa18.29■□□□□ 0.52
VEGFA-229ENST00000621747 IAH1Q2TAA2 248 aaPredicted RBP18.29■□□□□ 0.52
VEGFA-229ENST00000621747 MITD1Q8WV92 249 aa18.29■□□□□ 0.52
VEGFA-229ENST00000621747 C20orf85Q9H1P6 137 aa18.29■□□□□ 0.52
VEGFA-229ENST00000621747 HRH4Q9H3N8 390 aa18.29■□□□□ 0.52
VEGFA-229ENST00000621747 X6R8D5 127 aa18.29■□□□□ 0.52
VEGFA-229ENST00000621747 SOCS3O14543 225 aa18.28■□□□□ 0.52
VEGFA-229ENST00000621747 LYRM1O43325 122 aa18.28■□□□□ 0.52
VEGFA-229ENST00000621747 SCGB1D2O95969 90 aa18.28■□□□□ 0.52
VEGFA-229ENST00000621747 RBMY1A1P0DJD3 496 aaKnown RBP18.28■□□□□ 0.52
VEGFA-229ENST00000621747 RBMY1CP0DJD4 496 aa18.28■□□□□ 0.52
VEGFA-229ENST00000621747 ORM2P19652 201 aa18.28■□□□□ 0.52
VEGFA-229ENST00000621747 GALR1P47211 349 aa18.28■□□□□ 0.52
VEGFA-229ENST00000621747 MEOX2P50222 304 aa18.28■□□□□ 0.52
VEGFA-229ENST00000621747 RBMY1FQ15415 496 aaKnown RBP18.28■□□□□ 0.52
VEGFA-229ENST00000621747 FOXI2Q6ZQN5 318 aa18.28■□□□□ 0.52
VEGFA-229ENST00000621747 TMEM147Q9BVK8 224 aa18.28■□□□□ 0.52
VEGFA-229ENST00000621747 ZNF98A6NK75 572 aa18.27■□□□□ 0.52
VEGFA-229ENST00000621747 ISLRO14498 428 aa18.27■□□□□ 0.52
VEGFA-229ENST00000621747 PLA2G10O15496 165 aa18.27■□□□□ 0.52
VEGFA-229ENST00000621747 GATA2P23769 480 aaPredicted RBP18.27■□□□□ 0.52
VEGFA-229ENST00000621747 SAV1Q9H4B6 383 aaPredicted RBP18.27■□□□□ 0.52
VEGFA-229ENST00000621747 SLC25A22Q9H936 323 aa18.27■□□□□ 0.52
VEGFA-229ENST00000621747 XCL2Q9UBD3 114 aa18.27■□□□□ 0.52
VEGFA-229ENST00000621747 SPATA31B1PQ5VZV4 182 aa18.26■□□□□ 0.51
VEGFA-229ENST00000621747 CYP2G1PQ6ZSU1 146 aa18.26■□□□□ 0.51
VEGFA-229ENST00000621747 ZBTB8BQ8NAP8 495 aaPredicted RBP18.26■□□□□ 0.51
VEGFA-229ENST00000621747 OR1B1Q8NGR6 318 aa18.26■□□□□ 0.51
VEGFA-229ENST00000621747 GPR82Q96P67 336 aa18.26■□□□□ 0.51
VEGFA-229ENST00000621747 SLC25A32Q9H2D1 315 aa18.26■□□□□ 0.51
VEGFA-229ENST00000621747 GSKIPQ9P0R6 139 aa18.26■□□□□ 0.51
VEGFA-229ENST00000621747 PMS2P5A8MQ11 134 aa18.25■□□□□ 0.51
VEGFA-229ENST00000621747 C11orf94C9JXX5 98 aa18.25■□□□□ 0.51
VEGFA-229ENST00000621747 IL5P05113 134 aa18.25■□□□□ 0.51
VEGFA-229ENST00000621747 PAX9P55771 341 aa18.25■□□□□ 0.51
VEGFA-229ENST00000621747 TAS2R30P59541 319 aa18.25■□□□□ 0.51
VEGFA-229ENST00000621747 GDF5OSQ5U4N7 250 aa18.25■□□□□ 0.51
VEGFA-229ENST00000621747 TMEM14EPQ6UXP3 125 aa18.25■□□□□ 0.51
VEGFA-229ENST00000621747 TMEM182Q6ZP80 229 aaPredicted RBP18.25■□□□□ 0.51
VEGFA-229ENST00000621747 C2CD4CQ8TF44 421 aa18.25■□□□□ 0.51
VEGFA-229ENST00000621747 C16orf92Q96LL3 132 aa18.25■□□□□ 0.51
VEGFA-229ENST00000621747 METTL15P1P0C7V9 234 aa18.24■□□□□ 0.51
VEGFA-229ENST00000621747 DLK1P80370 383 aa18.24■□□□□ 0.51
VEGFA-229ENST00000621747 CLUHP3Q96NS8 147 aa18.24■□□□□ 0.51
VEGFA-229ENST00000621747 FNDC10F2Z333 226 aa18.23■□□□□ 0.51
VEGFA-229ENST00000621747 TSC22D2O75157 780 aa18.23■□□□□ 0.51
VEGFA-229ENST00000621747 IGKV3-20P01619 116 aa18.23■□□□□ 0.51
VEGFA-229ENST00000621747 TCRBP04435 133 aa18.23■□□□□ 0.51
VEGFA-229ENST00000621747 DEFB1P60022 68 aa18.23■□□□□ 0.51
VEGFA-229ENST00000621747 RRAS2P62070 204 aaPredicted RBP18.23■□□□□ 0.51
VEGFA-229ENST00000621747 SELENOTP62341 195 aa18.23■□□□□ 0.51
VEGFA-229ENST00000621747 EBLN2Q6P2I7 272 aa18.23■□□□□ 0.51
VEGFA-229ENST00000621747 OR10P1Q8NGE3 313 aa18.23■□□□□ 0.51
VEGFA-229ENST00000621747 RSG1Q9BU20 258 aa18.23■□□□□ 0.51
VEGFA-229ENST00000621747 CCDC32Q9BV29 185 aa18.23■□□□□ 0.51
VEGFA-229ENST00000621747 NPVFQ9HCQ7 196 aa18.23■□□□□ 0.51
VEGFA-229ENST00000621747 RPRMQ9NS64 109 aa18.23■□□□□ 0.51
VEGFA-229ENST00000621747 MGAT4CQ9UBM8 478 aa18.23■□□□□ 0.51
VEGFA-229ENST00000621747 ELOA3CA0A087WX78 387 aaPredicted RBP18.22■□□□□ 0.51
VEGFA-229ENST00000621747 TCTAP57738 103 aa18.22■□□□□ 0.51
VEGFA-229ENST00000621747 RAP2BP61225 183 aa18.22■□□□□ 0.51
VEGFA-229ENST00000621747 ZNF846Q147U1 533 aa18.22■□□□□ 0.51
VEGFA-229ENST00000621747 OR4B1Q8NGF8 309 aa18.22■□□□□ 0.51
VEGFA-229ENST00000621747 RCL1Q9Y2P8 373 aaKnown RBP18.22■□□□□ 0.51
VEGFA-229ENST00000621747 TRAV6A0A075B6T7 132 aa18.21■□□□□ 0.51
VEGFA-229ENST00000621747 CCNKO75909 580 aa18.21■□□□□ 0.51
VEGFA-229ENST00000621747 HLA-DMBP28068 263 aa18.21■□□□□ 0.51
VEGFA-229ENST00000621747 LGALS9CQ6DKI2 356 aa18.21■□□□□ 0.51
VEGFA-229ENST00000621747 S100A7AQ86SG5 101 aa18.21■□□□□ 0.51
VEGFA-229ENST00000621747 DOK5Q9P104 306 aa18.21■□□□□ 0.51
VEGFA-229ENST00000621747 HIGD1AQ9Y241 93 aa18.21■□□□□ 0.51
VEGFA-229ENST00000621747 H3BRN7 92 aa18.2■□□□□ 0.5
VEGFA-229ENST00000621747 HYPMO75409 117 aa18.2■□□□□ 0.5
VEGFA-229ENST00000621747 MBPP02686 304 aaPredicted RBP18.2■□□□□ 0.5
VEGFA-229ENST00000621747 LINC00869P0C866 280 aa18.2■□□□□ 0.5
VEGFA-229ENST00000621747 GSG1LQ6UXU4 331 aa18.2■□□□□ 0.5
VEGFA-229ENST00000621747 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa18.2■□□□□ 0.5
VEGFA-229ENST00000621747 SCRT1Q9BWW7 348 aa18.2■□□□□ 0.5
VEGFA-229ENST00000621747 SLC25A39Q9BZJ4 359 aaPredicted RBP18.2■□□□□ 0.5
VEGFA-229ENST00000621747 NUDT15Q9NV35 164 aa18.2■□□□□ 0.5
VEGFA-229ENST00000621747 CCSO14618 274 aa18.19■□□□□ 0.5
VEGFA-229ENST00000621747 FXYD7P58549 80 aa18.19■□□□□ 0.5
VEGFA-229ENST00000621747 PLP1P60201 277 aa18.19■□□□□ 0.5
VEGFA-229ENST00000621747 TEPPQ6URK8 271 aa18.19■□□□□ 0.5
VEGFA-229ENST00000621747 ZNF705AQ6ZN79 300 aaPredicted RBP18.19■□□□□ 0.5
VEGFA-229ENST00000621747 LINC00299Q6ZSB3 139 aa18.19■□□□□ 0.5
VEGFA-229ENST00000621747 ZNF431Q8TF32 576 aaPredicted RBP18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms