RNA–Protein interactions for RNA: ENST00000621562.1

U1.39-201, humanhuman

BASIC

Gene U1, Length 146 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U1.39-201ENST00000621562 LYNX1P0DP58 116 aa2.56□□□□□ -2
U1.39-201ENST00000621562 MGST1P10620 155 aaKnown RBP2.56□□□□□ -2
U1.39-201ENST00000621562 GRNP28799 593 aaKnown RBP2.56□□□□□ -2
U1.39-201ENST00000621562 BRS3P32247 399 aa2.56□□□□□ -2
U1.39-201ENST00000621562 MC5RP33032 325 aa2.56□□□□□ -2
U1.39-201ENST00000621562 CA7P43166 264 aa2.56□□□□□ -2
U1.39-201ENST00000621562 LGALS7P47929 136 aa2.56□□□□□ -2
U1.39-201ENST00000621562 CASP6P55212 293 aa2.56□□□□□ -2
U1.39-201ENST00000621562 SLC35B1P78383 322 aa2.56□□□□□ -2
U1.39-201ENST00000621562 ERHP84090 104 aaKnown RBP2.56□□□□□ -2
U1.39-201ENST00000621562 PRB3Q04118 309 aaPredicted RBP2.56□□□□□ -2
U1.39-201ENST00000621562 RBPJQ06330 500 aa2.56□□□□□ -2
U1.39-201ENST00000621562 VMA21Q3ZAQ7 101 aa2.56□□□□□ -2
U1.39-201ENST00000621562 FBXL19-AS1Q494R0 122 aa2.56□□□□□ -2
U1.39-201ENST00000621562 LRRC10Q5BKY1 277 aa2.56□□□□□ -2
U1.39-201ENST00000621562 C11orf71Q6IPW1 123 aa2.56□□□□□ -2
U1.39-201ENST00000621562 EBLN2Q6P2I7 272 aa2.56□□□□□ -2
U1.39-201ENST00000621562 TOMM20LQ6UXN7 152 aa2.56□□□□□ -2
U1.39-201ENST00000621562 GFRALQ6UXV0 394 aa2.56□□□□□ -2
U1.39-201ENST00000621562 ASCL5Q7RTU5 278 aa2.56□□□□□ -2
U1.39-201ENST00000621562 LINC00305Q7Z4B0 112 aa2.56□□□□□ -2
U1.39-201ENST00000621562 ATP5L2Q7Z4Y8 100 aa2.56□□□□□ -2
U1.39-201ENST00000621562 LHFPL4Q7Z7J7 247 aa2.56□□□□□ -2
U1.39-201ENST00000621562 KIR3DL3Q8N743 410 aa2.56□□□□□ -2
U1.39-201ENST00000621562 C5orf17Q8NAS9 161 aa2.56□□□□□ -2
U1.39-201ENST00000621562 GATD1Q8NB37 220 aa2.56□□□□□ -2
U1.39-201ENST00000621562 LY6G5BQ8NDX9 201 aa2.56□□□□□ -2
U1.39-201ENST00000621562 OR4B1Q8NGF8 309 aa2.56□□□□□ -2
U1.39-201ENST00000621562 OR8B3Q8NGG8 313 aa2.56□□□□□ -2
U1.39-201ENST00000621562 VN1R17PQ8TDU5 208 aa2.56□□□□□ -2
U1.39-201ENST00000621562 TSKUQ8WUA8 353 aa2.56□□□□□ -2
U1.39-201ENST00000621562 GTSF1Q8WW33 167 aa2.56□□□□□ -2
U1.39-201ENST00000621562 SMIM12Q96EX1 92 aa2.56□□□□□ -2
U1.39-201ENST00000621562 PERPQ96FX8 193 aa2.56□□□□□ -2
U1.39-201ENST00000621562 ABHD17AQ96GS6 310 aa2.56□□□□□ -2
U1.39-201ENST00000621562 OR8B2Q96RD0 313 aa2.56□□□□□ -2
U1.39-201ENST00000621562 MIEN1Q9BRT3 115 aa2.56□□□□□ -2
U1.39-201ENST00000621562 ATG101Q9BSB4 218 aa2.56□□□□□ -2
U1.39-201ENST00000621562 ALKBH7Q9BT30 221 aaPredicted RBP2.56□□□□□ -2
U1.39-201ENST00000621562 GSX1Q9H4S2 264 aaPredicted RBP2.56□□□□□ -2
U1.39-201ENST00000621562 TNFRSF19Q9NS68 423 aa2.56□□□□□ -2
U1.39-201ENST00000621562 ZNF586Q9NXT0 402 aa2.56□□□□□ -2
U1.39-201ENST00000621562 C1RLQ9NZP8 487 aa2.56□□□□□ -2
U1.39-201ENST00000621562 TMEM14CQ9P0S9 112 aa2.56□□□□□ -2
U1.39-201ENST00000621562 NAT8BQ9UHF3 227 aa2.56□□□□□ -2
U1.39-201ENST00000621562 EPDR1Q9UM22 224 aa2.56□□□□□ -2
U1.39-201ENST00000621562 POLQO75417 2590 aa2.56□□□□□ -2
U1.39-201ENST00000621562 USP24Q9UPU5 2620 aa2.56□□□□□ -2
U1.39-201ENST00000621562 CMYA5Q8N3K9 4069 aa2.56□□□□□ -2
U1.39-201ENST00000621562 FAM208BQ5VWN6 2430 aa2.56□□□□□ -2
U1.39-201ENST00000621562 IGHV3-21A0A0B4J1V1 117 aa2.55□□□□□ -2
U1.39-201ENST00000621562 WI2-2373I1.2A0A1W2PRP0 233 aa2.55□□□□□ -2
U1.39-201ENST00000621562 SH2D7A6NKC9 451 aaPredicted RBP2.55□□□□□ -2
U1.39-201ENST00000621562 A6NNC1 897 aa2.55□□□□□ -2
U1.39-201ENST00000621562 HIGD1CA8MV81 97 aa2.55□□□□□ -2
U1.39-201ENST00000621562 ZNF705FA8MVS1 300 aaPredicted RBP2.55□□□□□ -2
U1.39-201ENST00000621562 B9A039 149 aa2.55□□□□□ -2
U1.39-201ENST00000621562 DIRC3C9JPN6 131 aa2.55□□□□□ -2
U1.39-201ENST00000621562 F8W735 103 aaPredicted RBP2.55□□□□□ -2
U1.39-201ENST00000621562 H3BTX0 84 aa2.55□□□□□ -2
U1.39-201ENST00000621562 M0R143 59 aa2.55□□□□□ -2
U1.39-201ENST00000621562 HLA-DRB1P01911 266 aa2.55□□□□□ -2
U1.39-201ENST00000621562 APCSP02743 223 aa2.55□□□□□ -2
U1.39-201ENST00000621562 TCRAP04437 139 aa2.55□□□□□ -2
U1.39-201ENST00000621562 SLC25A5P05141 298 aaKnown RBP2.55□□□□□ -2
U1.39-201ENST00000621562 NBEAP1P0C6P0 100 aa2.55□□□□□ -2
U1.39-201ENST00000621562 FAM87AP0C7U9 286 aa2.55□□□□□ -2
U1.39-201ENST00000621562 ZNF705DP0CH99 300 aaPredicted RBP2.55□□□□□ -2
U1.39-201ENST00000621562 ZNF705BP0CI00 300 aaPredicted RBP2.55□□□□□ -2
U1.39-201ENST00000621562 IGLC2P0DOY2 106 aa2.55□□□□□ -2
U1.39-201ENST00000621562 IGLC3P0DOY3 106 aa2.55□□□□□ -2
U1.39-201ENST00000621562 PMCHP20382 165 aa2.55□□□□□ -2
U1.39-201ENST00000621562 APOBEC3AP31941 199 aaPredicted RBP2.55□□□□□ -2
U1.39-201ENST00000621562 AMTP48728 403 aa2.55□□□□□ -2
U1.39-201ENST00000621562 SUB1P53999 127 aaKnown RBP eCLIP2.55□□□□□ -2
U1.39-201ENST00000621562 PRRX1P54821 245 aa2.55□□□□□ -2
U1.39-201ENST00000621562 NDPQ00604 133 aa2.55□□□□□ -2
U1.39-201ENST00000621562 CDSNQ15517 529 aa2.55□□□□□ -2
U1.39-201ENST00000621562 MMDQ15546 238 aa2.55□□□□□ -2
U1.39-201ENST00000621562 USF2Q15853 346 aaPredicted RBP2.55□□□□□ -2
U1.39-201ENST00000621562 TNXAQ16473 311 aa2.55□□□□□ -2
U1.39-201ENST00000621562 KLK9Q2XQG4 91 aa2.55□□□□□ -2
U1.39-201ENST00000621562 PRR31Q5SQ13 230 aa2.55□□□□□ -2
U1.39-201ENST00000621562 LEMD1Q68G75 181 aa2.55□□□□□ -2
U1.39-201ENST00000621562 SIGLEC15Q6ZMC9 328 aa2.55□□□□□ -2
U1.39-201ENST00000621562 LINC00173Q6ZV60 143 aa2.55□□□□□ -2
U1.39-201ENST00000621562 TCF24Q7RTU0 167 aa2.55□□□□□ -2
U1.39-201ENST00000621562 ABCA12Q86UK0 2595 aa2.55□□□□□ -2
U1.39-201ENST00000621562 PPP1R27Q86WC6 154 aa2.55□□□□□ -2
U1.39-201ENST00000621562 BAGE3Q86Y29 109 aa2.55□□□□□ -2
U1.39-201ENST00000621562 BAGE2Q86Y30 109 aa2.55□□□□□ -2
U1.39-201ENST00000621562 FAM19A2Q8N3H0 131 aa2.55□□□□□ -2
U1.39-201ENST00000621562 Q8N6K4 173 aa2.55□□□□□ -2
U1.39-201ENST00000621562 NPBQ8NG41 125 aa2.55□□□□□ -2
U1.39-201ENST00000621562 IGFBPL1Q8WX77 278 aa2.55□□□□□ -2
U1.39-201ENST00000621562 SRSF12Q8WXF0 261 aaKnown RBP2.55□□□□□ -2
U1.39-201ENST00000621562 CCL17Q92583 94 aa2.55□□□□□ -2
U1.39-201ENST00000621562 FMC1Q96HJ9 113 aa2.55□□□□□ -2
U1.39-201ENST00000621562 AJUBAQ96IF1 538 aa2.55□□□□□ -2
U1.39-201ENST00000621562 C17orf77Q96MU5 243 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms