RNA–Protein interactions for RNA: ENST00000621217.4

GGA3-222, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 4,181 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-222ENST00000621217 IGKV1D-33P01593 117 aa7.46□□□□□ -1.22
GGA3-222ENST00000621217 IGKV1-33P01594 117 aa7.46□□□□□ -1.22
GGA3-222ENST00000621217 KIR3DL3Q8N743 410 aa7.46□□□□□ -1.22
GGA3-222ENST00000621217 OR4X2Q8NGF9 303 aa7.46□□□□□ -1.22
GGA3-222ENST00000621217 ZNF414Q96IQ9 312 aa7.46□□□□□ -1.22
GGA3-222ENST00000621217 AMMECR1Q9Y4X0 333 aaPredicted RBP7.46□□□□□ -1.22
GGA3-222ENST00000621217 KBTBD11-OT1A0A1B0GTJ5 212 aa7.45□□□□□ -1.22
GGA3-222ENST00000621217 IL6RP08887 468 aaPredicted RBP7.45□□□□□ -1.22
GGA3-222ENST00000621217 IGFL3Q6UXB1 125 aa7.45□□□□□ -1.22
GGA3-222ENST00000621217 NPIPB3Q92617 1050 aa7.45□□□□□ -1.22
GGA3-222ENST00000621217 CHODLQ9H9P2 273 aa7.45□□□□□ -1.22
GGA3-222ENST00000621217 CYSLTR1Q9Y271 337 aa7.45□□□□□ -1.22
GGA3-222ENST00000621217 FLNBO75369 2602 aaKnown RBP7.45□□□□□ -1.22
GGA3-222ENST00000621217 WDFY3Q8IZQ1 3526 aa7.45□□□□□ -1.22
GGA3-222ENST00000621217 IGHV3OR16-8A0A075B7F1 116 aa7.45□□□□□ -1.22
GGA3-222ENST00000621217 SMIM17P0DL12 118 aa7.45□□□□□ -1.22
GGA3-222ENST00000621217 RPL8P62917 257 aaKnown RBP7.45□□□□□ -1.22
GGA3-222ENST00000621217 ZNF726P1Q15940 193 aa7.45□□□□□ -1.22
GGA3-222ENST00000621217 ZNF841Q6ZN19 808 aa7.45□□□□□ -1.22
GGA3-222ENST00000621217 MIR17HGQ75NE6 70 aa7.45□□□□□ -1.22
GGA3-222ENST00000621217 GRAMD2BQ96HH9 432 aa7.45□□□□□ -1.22
GGA3-222ENST00000621217 C8orf88P0DMB2 117 aa7.45□□□□□ -1.22
GGA3-222ENST00000621217 ATP5J2P56134 94 aa7.45□□□□□ -1.22
GGA3-222ENST00000621217 TM4SF20Q53R12 229 aa7.45□□□□□ -1.22
GGA3-222ENST00000621217 TMEM177Q53S58 311 aa7.45□□□□□ -1.22
GGA3-222ENST00000621217 OR1L8Q8NGR8 309 aa7.45□□□□□ -1.22
GGA3-222ENST00000621217 IGFBPL1Q8WX77 278 aa7.45□□□□□ -1.22
GGA3-222ENST00000621217 NABP2Q9BQ15 211 aa7.45□□□□□ -1.22
GGA3-222ENST00000621217 CPAMD8Q8IZJ3 1885 aa7.45□□□□□ -1.22
GGA3-222ENST00000621217 E7EQL1 145 aa7.45□□□□□ -1.22
GGA3-222ENST00000621217 CD5LO43866 347 aa7.45□□□□□ -1.22
GGA3-222ENST00000621217 COX6CP09669 75 aa7.45□□□□□ -1.22
GGA3-222ENST00000621217 CKS2P33552 79 aa7.45□□□□□ -1.22
GGA3-222ENST00000621217 MS4A6AQ9H2W1 248 aa7.45□□□□□ -1.22
GGA3-222ENST00000621217 IZUMO1RA6ND01 250 aa7.44□□□□□ -1.22
GGA3-222ENST00000621217 IGKV1-16P04430 117 aa7.44□□□□□ -1.22
GGA3-222ENST00000621217 C3orf79P0CE67 100 aa7.44□□□□□ -1.22
GGA3-222ENST00000621217 TWIST1Q15672 202 aa7.44□□□□□ -1.22
GGA3-222ENST00000621217 ASPHD1Q5U4P2 390 aa7.44□□□□□ -1.22
GGA3-222ENST00000621217 Q6ZS49 121 aa7.44□□□□□ -1.22
GGA3-222ENST00000621217 OR9G1Q8NH87 305 aa7.44□□□□□ -1.22
GGA3-222ENST00000621217 EAF1Q96JC9 268 aaPredicted RBP7.44□□□□□ -1.22
GGA3-222ENST00000621217 MBNL3Q9NUK0 354 aaKnown RBP7.44□□□□□ -1.22
GGA3-222ENST00000621217 C2CD3Q4AC94 2353 aa7.44□□□□□ -1.22
GGA3-222ENST00000621217 TMEM238C9JI98 176 aa7.44□□□□□ -1.22
GGA3-222ENST00000621217 M0QZ24 198 aa7.44□□□□□ -1.22
GGA3-222ENST00000621217 M0R3E3 92 aa7.44□□□□□ -1.22
GGA3-222ENST00000621217 NDUFS7O75251 213 aa7.44□□□□□ -1.22
GGA3-222ENST00000621217 MMP23AO75900 390 aa7.44□□□□□ -1.22
GGA3-222ENST00000621217 PRB1P04280 392 aa7.44□□□□□ -1.22
GGA3-222ENST00000621217 COL8A2P25067 703 aa7.44□□□□□ -1.22
GGA3-222ENST00000621217 ZNF134P52741 427 aa7.44□□□□□ -1.22
GGA3-222ENST00000621217 ERVK11-1P61568 191 aa7.44□□□□□ -1.22
GGA3-222ENST00000621217 ECSCRQ19T08 205 aa7.44□□□□□ -1.22
GGA3-222ENST00000621217 FOXH1O75593 365 aa7.44□□□□□ -1.22
GGA3-222ENST00000621217 TMEM14EPQ6UXP3 125 aa7.44□□□□□ -1.22
GGA3-222ENST00000621217 ZNF502Q8TBZ5 544 aa7.44□□□□□ -1.22
GGA3-222ENST00000621217 SEPSECSQ9HD40 501 aaKnown RBP7.44□□□□□ -1.22
GGA3-222ENST00000621217 TMSB15BA0A087X1C1 80 aa7.43□□□□□ -1.22
GGA3-222ENST00000621217 A0A0G2JLM5 398 aa7.43□□□□□ -1.22
GGA3-222ENST00000621217 PGPA6NDG6 321 aa7.43□□□□□ -1.22
GGA3-222ENST00000621217 TMEM262E9PQX1 116 aa7.43□□□□□ -1.22
GGA3-222ENST00000621217 TYMSP04818 313 aa7.43□□□□□ -1.22
GGA3-222ENST00000621217 GPX1P07203 203 aa7.43□□□□□ -1.22
GGA3-222ENST00000621217 SAA1P0DJI8 122 aaPredicted RBP7.43□□□□□ -1.22
GGA3-222ENST00000621217 HSD52Q0P140 79 aa7.43□□□□□ -1.22
GGA3-222ENST00000621217 MSMPQ1L6U9 139 aa7.43□□□□□ -1.22
GGA3-222ENST00000621217 TREML4Q6UXN2 200 aa7.43□□□□□ -1.22
GGA3-222ENST00000621217 VSTM2AQ8TAG5 236 aa7.43□□□□□ -1.22
GGA3-222ENST00000621217 C19orf24Q9BVV8 132 aa7.43□□□□□ -1.22
GGA3-222ENST00000621217 UFC1Q9Y3C8 167 aa7.43□□□□□ -1.22
GGA3-222ENST00000621217 PFN1P07737 140 aaKnown RBP7.43□□□□□ -1.22
GGA3-222ENST00000621217 FAM90A2PQ658T7 463 aa7.43□□□□□ -1.22
GGA3-222ENST00000621217 ZNF788Q6ZQV5 615 aa7.43□□□□□ -1.22
GGA3-222ENST00000621217 OCC1Q8TAD7 63 aa7.43□□□□□ -1.22
GGA3-222ENST00000621217 MRPL16Q9NX20 251 aaKnown RBP7.43□□□□□ -1.22
GGA3-222ENST00000621217 C15orf62A8K5M9 175 aa7.43□□□□□ -1.22
GGA3-222ENST00000621217 ORM1P02763 201 aa7.43□□□□□ -1.22
GGA3-222ENST00000621217 LY6EQ16553 131 aa7.43□□□□□ -1.22
GGA3-222ENST00000621217 ZNF672Q499Z4 452 aaPredicted RBP7.43□□□□□ -1.22
GGA3-222ENST00000621217 SAMD5Q5TGI4 173 aa7.43□□□□□ -1.22
GGA3-222ENST00000621217 MBNL2Q5VZF2 373 aaKnown RBP7.43□□□□□ -1.22
GGA3-222ENST00000621217 PRNTQ86SH4 94 aa7.43□□□□□ -1.22
GGA3-222ENST00000621217 C11orf53Q8IXP5 236 aa7.43□□□□□ -1.22
GGA3-222ENST00000621217 ZNF418Q8TF45 676 aaPredicted RBP7.43□□□□□ -1.22
GGA3-222ENST00000621217 AGMATQ9BSE5 352 aa7.43□□□□□ -1.22
GGA3-222ENST00000621217 FBXL15Q9H469 300 aa7.43□□□□□ -1.22
GGA3-222ENST00000621217 OSTCQ9NRP0 149 aa7.43□□□□□ -1.22
GGA3-222ENST00000621217 EXPH5Q8NEV8 1989 aa7.43□□□□□ -1.22
GGA3-222ENST00000621217 TRBV6-6A0A0A6YYG2 114 aa7.42□□□□□ -1.22
GGA3-222ENST00000621217 OR11H12B2RN74 326 aa7.42□□□□□ -1.22
GGA3-222ENST00000621217 KRTAP27-1Q3LI81 207 aa7.42□□□□□ -1.22
GGA3-222ENST00000621217 IGFL2Q6UWQ7 119 aa7.42□□□□□ -1.22
GGA3-222ENST00000621217 OR11H1Q8NG94 326 aa7.42□□□□□ -1.22
GGA3-222ENST00000621217 OR11H2Q8NH07 326 aa7.42□□□□□ -1.22
GGA3-222ENST00000621217 SELENOKQ9Y6D0 94 aa7.42□□□□□ -1.22
GGA3-222ENST00000621217 DMDP11532 3685 aa7.42□□□□□ -1.22
GGA3-222ENST00000621217 TRAV5A0A0B4J249 113 aa7.42□□□□□ -1.22
GGA3-222ENST00000621217 ZNF785A8K8V0 405 aa7.42□□□□□ -1.22
GGA3-222ENST00000621217 YPEL1O60688 119 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms