RNA–Protein interactions for RNA: ENST00000621181.4

CLK1-215, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CLK1, Length 1,843 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-215ENST00000621181 IFNA5P01569 189 aa5.88□□□□□ -1.47
CLK1-215ENST00000621181 IGLV2-23P01705 113 aa5.88□□□□□ -1.47
CLK1-215ENST00000621181 CXCL1P09341 107 aa5.88□□□□□ -1.47
CLK1-215ENST00000621181 HOXA5P20719 270 aa5.88□□□□□ -1.47
CLK1-215ENST00000621181 RND2P52198 227 aa5.88□□□□□ -1.47
CLK1-215ENST00000621181 RPL30P62888 115 aaKnown RBP5.88□□□□□ -1.47
CLK1-215ENST00000621181 DLK1P80370 383 aa5.88□□□□□ -1.47
CLK1-215ENST00000621181 RHOGP84095 191 aa5.88□□□□□ -1.47
CLK1-215ENST00000621181 SERF2P84101 59 aa5.88□□□□□ -1.47
CLK1-215ENST00000621181 FABP9Q0Z7S8 132 aa5.88□□□□□ -1.47
CLK1-215ENST00000621181 ZBTB34Q8NCN2 500 aa5.88□□□□□ -1.47
CLK1-215ENST00000621181 Q8WTZ3 238 aa5.88□□□□□ -1.47
CLK1-215ENST00000621181 TVP23CQ96ET8 276 aa5.88□□□□□ -1.47
CLK1-215ENST00000621181 WDR61Q9GZS3 305 aaKnown RBP5.88□□□□□ -1.47
CLK1-215ENST00000621181 PSENENQ9NZ42 101 aa5.88□□□□□ -1.47
CLK1-215ENST00000621181 HSPB7Q9UBY9 170 aa5.88□□□□□ -1.47
CLK1-215ENST00000621181 TIMM9Q9Y5J7 89 aa5.88□□□□□ -1.47
CLK1-215ENST00000621181 FRAS1Q86XX4 4008 aa5.88□□□□□ -1.47
CLK1-215ENST00000621181 FAM223BA6NKX1 122 aa5.88□□□□□ -1.47
CLK1-215ENST00000621181 NDUFS6O75380 124 aaKnown RBP5.88□□□□□ -1.47
CLK1-215ENST00000621181 CLN5O75503 358 aa5.88□□□□□ -1.47
CLK1-215ENST00000621181 RBMXL2O75526 392 aaKnown RBP5.88□□□□□ -1.47
CLK1-215ENST00000621181 OR9G9P0C7N8 305 aa5.88□□□□□ -1.47
CLK1-215ENST00000621181 METTL15P1P0C7V9 234 aa5.88□□□□□ -1.47
CLK1-215ENST00000621181 BCL2P10415 239 aa5.88□□□□□ -1.47
CLK1-215ENST00000621181 IAPPP10997 89 aa5.88□□□□□ -1.47
CLK1-215ENST00000621181 TAGLN2P37802 199 aaKnown RBP5.88□□□□□ -1.47
CLK1-215ENST00000621181 UBE2KP61086 200 aa5.88□□□□□ -1.47
CLK1-215ENST00000621181 ATP5G2Q06055 141 aa5.88□□□□□ -1.47
CLK1-215ENST00000621181 TNXAQ16473 311 aa5.88□□□□□ -1.47
CLK1-215ENST00000621181 RTL8BQ17RB0 113 aa5.88□□□□□ -1.47
CLK1-215ENST00000621181 DEFB114Q30KQ6 69 aa5.88□□□□□ -1.47
CLK1-215ENST00000621181 FAM223AQ8IWN6 122 aa5.88□□□□□ -1.47
CLK1-215ENST00000621181 ZNF436-AS1Q8NC38 126 aaPredicted RBP5.88□□□□□ -1.47
CLK1-215ENST00000621181 OR2D2Q9H210 308 aa5.88□□□□□ -1.47
CLK1-215ENST00000621181 C2orf70A6NJV1 201 aa5.87□□□□□ -1.47
CLK1-215ENST00000621181 B4DEV8 164 aa5.87□□□□□ -1.47
CLK1-215ENST00000621181 ACTL6BO94805 426 aa5.87□□□□□ -1.47
CLK1-215ENST00000621181 IFNA17P01571 189 aa5.87□□□□□ -1.47
CLK1-215ENST00000621181 CRYGBP07316 175 aa5.87□□□□□ -1.47
CLK1-215ENST00000621181 NQO2P16083 231 aa5.87□□□□□ -1.47
CLK1-215ENST00000621181 KIR2DS2P43631 304 aa5.87□□□□□ -1.47
CLK1-215ENST00000621181 OR2B8PP59922 312 aa5.87□□□□□ -1.47
CLK1-215ENST00000621181 TNFRSF9Q07011 255 aa5.87□□□□□ -1.47
CLK1-215ENST00000621181 VWC2Q2TAL6 325 aa5.87□□□□□ -1.47
CLK1-215ENST00000621181 C15orf32Q32M92 178 aa5.87□□□□□ -1.47
CLK1-215ENST00000621181 VMA21Q3ZAQ7 101 aa5.87□□□□□ -1.47
CLK1-215ENST00000621181 AARDQ4LEZ3 155 aa5.87□□□□□ -1.47
CLK1-215ENST00000621181 TMEM41BQ5BJD5 291 aa5.87□□□□□ -1.47
CLK1-215ENST00000621181 ZNF645Q8N7E2 425 aa5.87□□□□□ -1.47
CLK1-215ENST00000621181 SRSF12Q8WXF0 261 aaKnown RBP5.87□□□□□ -1.47
CLK1-215ENST00000621181 GGTLC1Q9BX51 225 aa5.87□□□□□ -1.47
CLK1-215ENST00000621181 RBKSQ9H477 322 aa5.87□□□□□ -1.47
CLK1-215ENST00000621181 TMEM242Q9NWH2 141 aa5.87□□□□□ -1.47
CLK1-215ENST00000621181 TECRQ9NZ01 308 aaKnown RBP5.87□□□□□ -1.47
CLK1-215ENST00000621181 LOC102724200A0A096LPH7 203 aaPredicted RBP5.86□□□□□ -1.47
CLK1-215ENST00000621181 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.86□□□□□ -1.47
CLK1-215ENST00000621181 A0A0J9YWU9 116 aa5.86□□□□□ -1.47
CLK1-215ENST00000621181 SRRM4A7MD48 611 aaKnown RBP5.86□□□□□ -1.47
CLK1-215ENST00000621181 PPP5D1E7EU14 171 aa5.86□□□□□ -1.47
CLK1-215ENST00000621181 S100A6P06703 90 aa5.86□□□□□ -1.47
CLK1-215ENST00000621181 RAB2AP61019 212 aa5.86□□□□□ -1.47
CLK1-215ENST00000621181 RPP25LQ8N5L8 163 aaKnown RBP5.86□□□□□ -1.47
CLK1-215ENST00000621181 NECAP1Q8NC96 275 aa5.86□□□□□ -1.47
CLK1-215ENST00000621181 SCGB1C1Q8TD33 95 aa5.86□□□□□ -1.47
CLK1-215ENST00000621181 PINX1Q96BK5 328 aaKnown RBP5.86□□□□□ -1.47
CLK1-215ENST00000621181 OVOL2Q9BRP0 275 aa5.86□□□□□ -1.47
CLK1-215ENST00000621181 TCEAL7Q9BRU2 100 aa5.86□□□□□ -1.47
CLK1-215ENST00000621181 NIPSNAP3BQ9BS92 247 aa5.86□□□□□ -1.47
CLK1-215ENST00000621181 TMPRSS5Q9H3S3 457 aa5.86□□□□□ -1.47
CLK1-215ENST00000621181 SDF2L1Q9HCN8 221 aa5.86□□□□□ -1.47
CLK1-215ENST00000621181 GSN-AS1Q9NRJ2 163 aa5.86□□□□□ -1.47
CLK1-215ENST00000621181 GNG13Q9P2W3 67 aa5.86□□□□□ -1.47
CLK1-215ENST00000621181 RBM7Q9Y580 266 aaKnown RBP5.86□□□□□ -1.47
CLK1-215ENST00000621181 SELENOKQ9Y6D0 94 aa5.86□□□□□ -1.47
CLK1-215ENST00000621181 TGIF2-C20orf24A0A0A6YYL0 155 aa5.85□□□□□ -1.47
CLK1-215ENST00000621181 TRBV9A0A0B4J1U6 114 aa5.85□□□□□ -1.47
CLK1-215ENST00000621181 LINC00587B1AMM8 73 aa5.85□□□□□ -1.47
CLK1-215ENST00000621181 NDUFB8O95169 186 aa5.85□□□□□ -1.47
CLK1-215ENST00000621181 EDN2P20800 178 aa5.85□□□□□ -1.47
CLK1-215ENST00000621181 HBG1P69891 147 aa5.85□□□□□ -1.47
CLK1-215ENST00000621181 HBG2P69892 147 aa5.85□□□□□ -1.47
CLK1-215ENST00000621181 SLC38A11Q08AI6 406 aa5.85□□□□□ -1.47
CLK1-215ENST00000621181 PNRC1Q12796 327 aaPredicted RBP5.85□□□□□ -1.47
CLK1-215ENST00000621181 PRSS8Q16651 343 aa5.85□□□□□ -1.47
CLK1-215ENST00000621181 FAM209BQ5JX69 171 aa5.85□□□□□ -1.47
CLK1-215ENST00000621181 CEMP1Q6PRD7 247 aaPredicted RBP5.85□□□□□ -1.47
CLK1-215ENST00000621181 LCN15Q6UWW0 184 aa5.85□□□□□ -1.47
CLK1-215ENST00000621181 TMEM61Q8N0U2 210 aa5.85□□□□□ -1.47
CLK1-215ENST00000621181 TEX45Q8NA69 505 aa5.85□□□□□ -1.47
CLK1-215ENST00000621181 TCTEX1D2Q8WW35 142 aa5.85□□□□□ -1.47
CLK1-215ENST00000621181 KLK5Q9Y337 293 aaPredicted RBP5.85□□□□□ -1.47
CLK1-215ENST00000621181 TRBV24-1A0A075B6N3 115 aa5.85□□□□□ -1.47
CLK1-215ENST00000621181 ZNF320A2RRD8 509 aa5.85□□□□□ -1.47
CLK1-215ENST00000621181 MAP1LC3B2A6NCE7 125 aa5.85□□□□□ -1.47
CLK1-215ENST00000621181 LGALS9O00182 355 aa5.85□□□□□ -1.47
CLK1-215ENST00000621181 HIST1H2BKO60814 126 aa5.85□□□□□ -1.47
CLK1-215ENST00000621181 GGCTO75223 188 aaKnown RBP5.85□□□□□ -1.47
CLK1-215ENST00000621181 OR2J3O76001 311 aa5.85□□□□□ -1.47
CLK1-215ENST00000621181 S1PR2O95136 353 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms